RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 LRRFIP1Q32MZ4 808 aaKnown RBP6.53□□□□□ -1.36
COL17A1-206ENST00000483876 SUSD4Q5VX71 490 aa6.53□□□□□ -1.36
COL17A1-206ENST00000483876 TSHZ3Q63HK5 1081 aa6.53□□□□□ -1.36
COL17A1-206ENST00000483876 PRR5LQ6MZQ0 368 aa6.53□□□□□ -1.36
COL17A1-206ENST00000483876 KIAA1211Q6ZU35 1233 aa6.53□□□□□ -1.36
COL17A1-206ENST00000483876 HSCBQ8IWL3 235 aa6.53□□□□□ -1.36
COL17A1-206ENST00000483876 KCNB2Q92953 911 aa6.53□□□□□ -1.36
COL17A1-206ENST00000483876 R3HDMLQ9H3Y0 253 aa6.53□□□□□ -1.36
COL17A1-206ENST00000483876 DIAPH3Q9NSV4 1193 aa6.53□□□□□ -1.36
COL17A1-206ENST00000483876 DBNLQ9UJU6 430 aaKnown RBP6.53□□□□□ -1.36
COL17A1-206ENST00000483876 CHMP3Q9Y3E7 222 aa6.53□□□□□ -1.36
COL17A1-206ENST00000483876 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.53□□□□□ -1.36
COL17A1-206ENST00000483876 SLX4Q8IY92 1834 aa6.53□□□□□ -1.36
COL17A1-206ENST00000483876 UBN2Q6ZU65 1347 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 MROH5Q6ZUA9 1318 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 BCORQ6W2J9 1755 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 ZBTB22O15209 634 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 NPHP1O15259 732 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 ST18O60284 1047 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 NPM3O75607 178 aaKnown RBP6.52□□□□□ -1.37
COL17A1-206ENST00000483876 PDE8BO95263 885 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 MYCP01106 439 aaPredicted RBP6.52□□□□□ -1.37
COL17A1-206ENST00000483876 ITGA6P23229 1130 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 GPTP24298 496 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 TM4SF4P48230 202 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 TSGA10IPQ3SY00 556 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 CCDC152Q4G0S7 254 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 LRRC24Q50LG9 513 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 CCDC158Q5M9N0 1113 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 LDHAL6AQ6ZMR3 332 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 NBPF11Q86T75 865 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 P2RX7Q99572 595 aaKnown RBP6.52□□□□□ -1.37
COL17A1-206ENST00000483876 CFHR5Q9BXR6 569 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 NYXQ9GZU5 481 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 BCL11AQ9H165 835 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 ANTXR1Q9H6X2 564 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 CIZ1Q9ULV3 898 aaPredicted RBP6.52□□□□□ -1.37
COL17A1-206ENST00000483876 NIP7Q9Y221 180 aaKnown RBP eCLIP6.52□□□□□ -1.37
COL17A1-206ENST00000483876 HCN4Q9Y3Q4 1203 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 COL11A2P13942 1736 aaPredicted RBP6.52□□□□□ -1.37
COL17A1-206ENST00000483876 ABCC12Q96J65 1359 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 NUP98P52948 1817 aa6.52□□□□□ -1.37
COL17A1-206ENST00000483876 A0A1B0GUL7 405 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 K7ELQ4 463 aaPredicted RBP6.51□□□□□ -1.37
COL17A1-206ENST00000483876 NTSR2O95665 410 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 SLC4A3P48751 1232 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 TIMM10P62072 90 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 LRIT3Q3SXY7 679 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 TAF7LQ5H9L4 462 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 RTL5Q5HYW3 569 aaPredicted RBP6.51□□□□□ -1.37
COL17A1-206ENST00000483876 CWC27Q6UX04 472 aaKnown RBP6.51□□□□□ -1.37
COL17A1-206ENST00000483876 TPTE2Q6XPS3 522 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 KRT26Q7Z3Y9 468 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 LARGE2Q8N3Y3 721 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 VGLL2Q8N8G2 317 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 KBTBD3Q8NAB2 608 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 TRPM4Q8TD43 1214 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 MAP4K1Q92918 833 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 ZNF594Q96JF6 807 aaPredicted RBP6.51□□□□□ -1.37
COL17A1-206ENST00000483876 NEUROD6Q96NK8 337 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 GUCD1Q96NT3 240 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 PSMD1Q99460 953 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 DBNDD2Q9BQY9 259 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 PUS3Q9BZE2 481 aaKnown RBP6.51□□□□□ -1.37
COL17A1-206ENST00000483876 TM6SF1Q9BZW5 370 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 LSG1Q9H089 658 aaKnown RBP6.51□□□□□ -1.37
COL17A1-206ENST00000483876 BOLA2Q9H3K6 86 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 GREM2Q9H772 168 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 CWC22Q9HCG8 908 aaKnown RBP6.51□□□□□ -1.37
COL17A1-206ENST00000483876 ANO2Q9NQ90 1003 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 HELLSQ9NRZ9 838 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 TLR7Q9NYK1 1049 aaKnown RBP6.51□□□□□ -1.37
COL17A1-206ENST00000483876 HTTP42858 3142 aa6.51□□□□□ -1.37
COL17A1-206ENST00000483876 MYH14Q7Z406 1995 aaKnown RBP6.51□□□□□ -1.37
COL17A1-206ENST00000483876 IRS2Q9Y4H2 1338 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 ANKRD36CQ5JPF3 1778 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 IGSF3O75054 1194 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 ZFYP08048 801 aaPredicted RBP6.5□□□□□ -1.37
COL17A1-206ENST00000483876 NPR1P16066 1061 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 DDIT3P35638 169 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 GMPSP49915 693 aaPredicted RBP6.5□□□□□ -1.37
COL17A1-206ENST00000483876 BCAMP50895 628 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 ST5P78524 1137 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 NECTIN1Q15223 517 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 SLC9C1Q4G0N8 1177 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 TJAP1Q5JTD0 557 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 TBC1D9BQ66K14 1250 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 CNBD1Q8NA66 436 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 LPIN2Q92539 896 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 ERO1AQ96HE7 468 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 SETDB2Q96T68 719 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 CDC5LQ99459 802 aaKnown RBP6.5□□□□□ -1.37
COL17A1-206ENST00000483876 FSD1Q9BTV5 496 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 ALDH8A1Q9H2A2 487 aaPredicted RBP6.5□□□□□ -1.37
COL17A1-206ENST00000483876 CNNM1Q9NRU3 951 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 CHMP5Q9NZZ3 219 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 MUC3AQ02505 3323 aa6.5□□□□□ -1.37
COL17A1-206ENST00000483876 ANKRD31Q8N7Z5 1873 aa6.49□□□□□ -1.37
COL17A1-206ENST00000483876 COL4A5P29400 1685 aa6.49□□□□□ -1.37
COL17A1-206ENST00000483876 KIAA0100Q14667 2235 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms