RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CRY2Q49AN0 593 aa15.63■□□□□ 0.09
CPNE1-225ENST00000483495 VPS37DQ86XT2 251 aa15.63■□□□□ 0.09
CPNE1-225ENST00000483495 IFNL3Q8IZI9 196 aa15.63■□□□□ 0.09
CPNE1-225ENST00000483495 EPB41L4AQ9HCS5 686 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-225ENST00000483495 GSG1L2A8MUP6 293 aa15.63■□□□□ 0.09
CPNE1-225ENST00000483495 PRC1O43663 620 aa15.63■□□□□ 0.09
CPNE1-225ENST00000483495 APPP05067 770 aa15.63■□□□□ 0.09
CPNE1-225ENST00000483495 PDIA3P30101 505 aaKnown RBP15.63■□□□□ 0.09
CPNE1-225ENST00000483495 RALYLQ86SE5 291 aaKnown RBP15.63■□□□□ 0.09
CPNE1-225ENST00000483495 TBC1D10CQ8IV04 446 aa15.63■□□□□ 0.09
CPNE1-225ENST00000483495 ARMT1Q9H993 441 aa15.63■□□□□ 0.09
CPNE1-225ENST00000483495 IQSEC3Q9UPP2 1182 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-225ENST00000483495 PLSCR1O15162 318 aa15.62■□□□□ 0.09
CPNE1-225ENST00000483495 JAK2O60674 1132 aa15.62■□□□□ 0.09
CPNE1-225ENST00000483495 DTNBO60941 627 aa15.62■□□□□ 0.09
CPNE1-225ENST00000483495 SERPINB2P05120 415 aa15.62■□□□□ 0.09
CPNE1-225ENST00000483495 KLRK1P26718 216 aa15.62■□□□□ 0.09
CPNE1-225ENST00000483495 HIBADHP31937 336 aaKnown RBP15.62■□□□□ 0.09
CPNE1-225ENST00000483495 CHST3Q7LGC8 479 aa15.62■□□□□ 0.09
CPNE1-225ENST00000483495 LCORLQ8N3X6 602 aa15.62■□□□□ 0.09
CPNE1-225ENST00000483495 NSUN7Q8NE18 718 aaKnown RBP15.62■□□□□ 0.09
CPNE1-225ENST00000483495 VPS37CA5D8V6 355 aaPredicted RBP15.61■□□□□ 0.09
CPNE1-225ENST00000483495 TRDNQ13061 729 aa15.61■□□□□ 0.09
CPNE1-225ENST00000483495 TMED8Q6PL24 325 aaPredicted RBP15.61■□□□□ 0.09
CPNE1-225ENST00000483495 LEMD3Q9Y2U8 911 aa15.61■□□□□ 0.09
CPNE1-225ENST00000483495 SALL1Q9NSC2 1324 aa15.61■□□□□ 0.09
CPNE1-225ENST00000483495 CTDNEP1O95476 244 aa15.61■□□□□ 0.09
CPNE1-225ENST00000483495 CYP7A1P22680 504 aa15.61■□□□□ 0.09
CPNE1-225ENST00000483495 ST5P78524 1137 aa15.61■□□□□ 0.09
CPNE1-225ENST00000483495 HMGN5P82970 282 aaKnown RBP15.61■□□□□ 0.09
CPNE1-225ENST00000483495 CDC37L1Q7L3B6 337 aa15.61■□□□□ 0.09
CPNE1-225ENST00000483495 USP48Q86UV5 1035 aa15.61■□□□□ 0.09
CPNE1-225ENST00000483495 NAPBQ9H115 298 aa15.61■□□□□ 0.09
CPNE1-225ENST00000483495 ABCF2Q9UG63 623 aa15.61■□□□□ 0.09
CPNE1-225ENST00000483495 CACNA1SQ13698 1873 aa15.6■□□□□ 0.09
CPNE1-225ENST00000483495 TIAM2Q8IVF5 1701 aa15.6■□□□□ 0.09
CPNE1-225ENST00000483495 ZNF445P59923 1031 aa15.6■□□□□ 0.09
CPNE1-225ENST00000483495 CAVIN1Q6NZI2 390 aaKnown RBP15.6■□□□□ 0.09
CPNE1-225ENST00000483495 C15orf52Q6ZUT6 534 aaKnown RBP15.6■□□□□ 0.09
CPNE1-225ENST00000483495 ADGRA1Q86SQ6 560 aa15.6■□□□□ 0.09
CPNE1-225ENST00000483495 NACAP1Q9BZK3 213 aa15.6■□□□□ 0.09
CPNE1-225ENST00000483495 RAI14Q9P0K7 980 aa15.6■□□□□ 0.09
CPNE1-225ENST00000483495 SLC4A4Q9Y6R1 1079 aa15.6■□□□□ 0.09
CPNE1-225ENST00000483495 KLRG2A4D1S0 409 aaPredicted RBP15.59■□□□□ 0.09
CPNE1-225ENST00000483495 POLRMTO00411 1230 aaKnown RBP15.59■□□□□ 0.09
CPNE1-225ENST00000483495 IGSF3O75054 1194 aa15.59■□□□□ 0.09
CPNE1-225ENST00000483495 DDR1Q08345 913 aa15.59■□□□□ 0.09
CPNE1-225ENST00000483495 FOXD4L6Q3SYB3 417 aaPredicted RBP15.59■□□□□ 0.09
CPNE1-225ENST00000483495 FOXD4L3Q6VB84 417 aaPredicted RBP15.59■□□□□ 0.09
CPNE1-225ENST00000483495 RIOK1Q9BRS2 568 aaKnown RBP15.59■□□□□ 0.09
CPNE1-225ENST00000483495 GPHNQ9NQX3 736 aaPredicted RBP15.59■□□□□ 0.09
CPNE1-225ENST00000483495 CNPY2Q9Y2B0 182 aa15.59■□□□□ 0.09
CPNE1-225ENST00000483495 EP400Q96L91 3159 aa15.59■□□□□ 0.09
CPNE1-225ENST00000483495 PRKAB2O43741 272 aa15.59■□□□□ 0.09
CPNE1-225ENST00000483495 HOXA10P31260 410 aaPredicted RBP15.59■□□□□ 0.09
CPNE1-225ENST00000483495 MIGA1Q8NAN2 632 aa15.59■□□□□ 0.09
CPNE1-225ENST00000483495 ZNF384Q8TF68 577 aa15.59■□□□□ 0.09
CPNE1-225ENST00000483495 RPGRQ92834 1020 aaKnown RBP15.59■□□□□ 0.09
CPNE1-225ENST00000483495 GDPD2Q9HCC8 539 aa15.59■□□□□ 0.09
CPNE1-225ENST00000483495 TFCP2L1Q9NZI6 479 aa15.59■□□□□ 0.09
CPNE1-225ENST00000483495 BRPF3Q9ULD4 1205 aa15.59■□□□□ 0.09
CPNE1-225ENST00000483495 NSFL1CQ9UNZ2 370 aaKnown RBP15.59■□□□□ 0.09
CPNE1-225ENST00000483495 XDHP47989 1333 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 MAGEB6P1A0A0J9YX57 407 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 PTPDC1A2A3K4 754 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 NCLP19338 710 aaKnown RBP15.58■□□□□ 0.08
CPNE1-225ENST00000483495 MRE11P49959 708 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 DNM1Q05193 864 aaKnown RBP15.58■□□□□ 0.08
CPNE1-225ENST00000483495 CSPP1Q1MSJ5 1256 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 ZSCAN23Q3MJ62 389 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 CYB5R4Q7L1T6 521 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 TXNRD3Q86VQ6 643 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 GAS2L3Q86XJ1 694 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 STAG1Q8WVM7 1258 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 AKT1S1Q96B36 256 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 TMEM87BQ96K49 555 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 CNNM2Q9H8M5 875 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 ANGEL1Q9UNK9 670 aaKnown RBP15.58■□□□□ 0.08
CPNE1-225ENST00000483495 HPS5Q9UPZ3 1129 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 KIF3AQ9Y496 699 aa15.58■□□□□ 0.08
CPNE1-225ENST00000483495 NEDD4P46934 1319 aa15.57■□□□□ 0.08
CPNE1-225ENST00000483495 SH2B2O14492 632 aaPredicted RBP15.57■□□□□ 0.08
CPNE1-225ENST00000483495 CCT2P78371 535 aaKnown RBP15.57■□□□□ 0.08
CPNE1-225ENST00000483495 AKNAD1Q5T1N1 836 aa15.57■□□□□ 0.08
CPNE1-225ENST00000483495 NAA16Q6N069 864 aaPredicted RBP15.57■□□□□ 0.08
CPNE1-225ENST00000483495 NKX2-3Q8TAU0 364 aa15.57■□□□□ 0.08
CPNE1-225ENST00000483495 NSUN4Q96CB9 384 aaKnown RBP15.57■□□□□ 0.08
CPNE1-225ENST00000483495 RBM17Q96I25 401 aaKnown RBP15.57■□□□□ 0.08
CPNE1-225ENST00000483495 NCOA5Q9HCD5 579 aaKnown RBP15.57■□□□□ 0.08
CPNE1-225ENST00000483495 KLF18A0A0U1RQI7 1052 aa15.57■□□□□ 0.08
CPNE1-225ENST00000483495 GADD45BO75293 160 aaPredicted RBP15.57■□□□□ 0.08
CPNE1-225ENST00000483495 TDO2P48775 406 aa15.57■□□□□ 0.08
CPNE1-225ENST00000483495 ZNF827Q17R98 1081 aa15.57■□□□□ 0.08
CPNE1-225ENST00000483495 FAM184AQ8NB25 1140 aa15.57■□□□□ 0.08
CPNE1-225ENST00000483495 DDX11Q96FC9 970 aa15.57■□□□□ 0.08
CPNE1-225ENST00000483495 TMEM63CQ9P1W3 806 aa15.57■□□□□ 0.08
CPNE1-225ENST00000483495 ANKIB1Q9P2G1 1089 aa15.57■□□□□ 0.08
CPNE1-225ENST00000483495 ANAPC4Q9UJX5 808 aa15.57■□□□□ 0.08
CPNE1-225ENST00000483495 B4E1Z4 1266 aa15.56■□□□□ 0.08
CPNE1-225ENST00000483495 DHX16O60231 1041 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms