RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 ORC1Q13415 861 aa6.05□□□□□ -1.44
SNX27-205ENST00000482791 AEBP1Q8IUX7 1158 aa6.05□□□□□ -1.44
SNX27-205ENST00000482791 CCNJLQ8IV13 435 aa6.05□□□□□ -1.44
SNX27-205ENST00000482791 UTP4Q969X6 686 aaKnown RBP6.05□□□□□ -1.44
SNX27-205ENST00000482791 LACRTQ9GZZ8 138 aa6.05□□□□□ -1.44
SNX27-205ENST00000482791 A0A1W2PP55 124 aa6.04□□□□□ -1.44
SNX27-205ENST00000482791 EPHA1P21709 976 aa6.04□□□□□ -1.44
SNX27-205ENST00000482791 FMR1Q06787 632 aaKnown RBP eCLIP6.04□□□□□ -1.44
SNX27-205ENST00000482791 TXNDC11Q6PKC3 985 aa6.04□□□□□ -1.44
SNX27-205ENST00000482791 CCDC74AQ96AQ1 378 aa6.04□□□□□ -1.44
SNX27-205ENST00000482791 MYRFLQ96LU7 910 aa6.04□□□□□ -1.44
SNX27-205ENST00000482791 SOX17Q9H6I2 414 aaPredicted RBP6.04□□□□□ -1.44
SNX27-205ENST00000482791 LATS2Q9NRM7 1088 aa6.04□□□□□ -1.44
SNX27-205ENST00000482791 LINC01387J3KSC0 135 aa6.03□□□□□ -1.44
SNX27-205ENST00000482791 FSCN2O14926 492 aa6.03□□□□□ -1.44
SNX27-205ENST00000482791 PLCB3Q01970 1234 aa6.03□□□□□ -1.44
SNX27-205ENST00000482791 PTPN12Q05209 780 aaKnown RBP6.03□□□□□ -1.44
SNX27-205ENST00000482791 ENOX2Q16206 610 aaKnown RBP6.03□□□□□ -1.44
SNX27-205ENST00000482791 MSMPQ1L6U9 139 aa6.03□□□□□ -1.44
SNX27-205ENST00000482791 USPL1Q5W0Q7 1092 aa6.03□□□□□ -1.44
SNX27-205ENST00000482791 PRPF40BQ6NWY9 871 aaKnown RBP6.03□□□□□ -1.44
SNX27-205ENST00000482791 FAM20CQ8IXL6 584 aa6.03□□□□□ -1.44
SNX27-205ENST00000482791 FBF1Q8TES7 1133 aa6.03□□□□□ -1.44
SNX27-205ENST00000482791 HHIPQ96QV1 700 aa6.03□□□□□ -1.44
SNX27-205ENST00000482791 TCF12Q99081 682 aa6.03□□□□□ -1.44
SNX27-205ENST00000482791 FAM83CQ9BQN1 747 aa6.03□□□□□ -1.44
SNX27-205ENST00000482791 SEC31BQ9NQW1 1179 aa6.03□□□□□ -1.44
SNX27-205ENST00000482791 CCDC39Q9UFE4 941 aa6.03□□□□□ -1.44
SNX27-205ENST00000482791 TRAK1Q9UPV9 953 aa6.03□□□□□ -1.44
SNX27-205ENST00000482791 WDR64B1ANS9 1081 aa6.02□□□□□ -1.45
SNX27-205ENST00000482791 DDX3YO15523 660 aaKnown RBP6.02□□□□□ -1.45
SNX27-205ENST00000482791 POLR3DP05423 398 aaPredicted RBP6.02□□□□□ -1.45
SNX27-205ENST00000482791 ACAD11Q709F0 780 aa6.02□□□□□ -1.45
SNX27-205ENST00000482791 VN1R5Q7Z5H4 357 aa6.02□□□□□ -1.45
SNX27-205ENST00000482791 LIN7BQ9HAP6 207 aa6.02□□□□□ -1.45
SNX27-205ENST00000482791 NPHS2Q9NP85 383 aa6.02□□□□□ -1.45
SNX27-205ENST00000482791 SH2B1Q9NRF2 756 aaPredicted RBP6.02□□□□□ -1.45
SNX27-205ENST00000482791 ADAM11O75078 769 aa6.01□□□□□ -1.45
SNX27-205ENST00000482791 TRPA1O75762 1119 aa6.01□□□□□ -1.45
SNX27-205ENST00000482791 ITPKAP23677 461 aa6.01□□□□□ -1.45
SNX27-205ENST00000482791 CD68P34810 354 aaPredicted RBP6.01□□□□□ -1.45
SNX27-205ENST00000482791 ARL4DP49703 201 aa6.01□□□□□ -1.45
SNX27-205ENST00000482791 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.01□□□□□ -1.45
SNX27-205ENST00000482791 A0A096LPE4 126 aa6□□□□□ -1.45
SNX27-205ENST00000482791 A0A1W2PPZ6 126 aa6□□□□□ -1.45
SNX27-205ENST00000482791 FGD1P98174 961 aa6□□□□□ -1.45
SNX27-205ENST00000482791 IKBKEQ14164 716 aa6□□□□□ -1.45
SNX27-205ENST00000482791 CLEC10AQ8IUN9 316 aa6□□□□□ -1.45
SNX27-205ENST00000482791 FOXD4L4Q8WXT5 416 aaPredicted RBP6□□□□□ -1.45
SNX27-205ENST00000482791 ASIC4Q96FT7 647 aa6□□□□□ -1.45
SNX27-205ENST00000482791 MFSD14AQ96MC6 490 aa6□□□□□ -1.45
SNX27-205ENST00000482791 CARD10Q9BWT7 1032 aa6□□□□□ -1.45
SNX27-205ENST00000482791 EHD4Q9H223 541 aa6□□□□□ -1.45
SNX27-205ENST00000482791 CLEC4MQ9H2X3 399 aaPredicted RBP6□□□□□ -1.45
SNX27-205ENST00000482791 ZFYVE1Q9HBF4 777 aa6□□□□□ -1.45
SNX27-205ENST00000482791 NLRP2Q9NX02 1062 aa6□□□□□ -1.45
SNX27-205ENST00000482791 PNMA6FA0A0J9YX94 578 aa5.99□□□□□ -1.45
SNX27-205ENST00000482791 ESRRAP11474 423 aaPredicted RBP5.99□□□□□ -1.45
SNX27-205ENST00000482791 BMP3P12645 472 aa5.99□□□□□ -1.45
SNX27-205ENST00000482791 XRCC5P13010 732 aaKnown RBP5.99□□□□□ -1.45
SNX27-205ENST00000482791 GRIA4P48058 902 aa5.99□□□□□ -1.45
SNX27-205ENST00000482791 C19orf57Q0VDD7 668 aa5.99□□□□□ -1.45
SNX27-205ENST00000482791 UVSSAQ2YD98 709 aa5.99□□□□□ -1.45
SNX27-205ENST00000482791 RPS26P11Q5JNZ5 115 aaPredicted RBP5.99□□□□□ -1.45
SNX27-205ENST00000482791 ALG1LQ6GMV1 187 aa5.99□□□□□ -1.45
SNX27-205ENST00000482791 BEND4Q6ZU67 534 aa5.99□□□□□ -1.45
SNX27-205ENST00000482791 ASAP3Q8TDY4 903 aa5.99□□□□□ -1.45
SNX27-205ENST00000482791 UBASH3BQ8TF42 649 aa5.99□□□□□ -1.45
SNX27-205ENST00000482791 KRTAP9-3Q9BYQ3 159 aa5.99□□□□□ -1.45
SNX27-205ENST00000482791 SRCIN1Q9C0H9 1055 aa5.99□□□□□ -1.45
SNX27-205ENST00000482791 PIM2Q9P1W9 311 aa5.99□□□□□ -1.45
SNX27-205ENST00000482791 ZBTB7CA1YPR0 619 aa5.98□□□□□ -1.45
SNX27-205ENST00000482791 SOX1O00570 391 aaPredicted RBP5.98□□□□□ -1.45
SNX27-205ENST00000482791 GIPC1O14908 333 aa5.98□□□□□ -1.45
SNX27-205ENST00000482791 GADD45BO75293 160 aaPredicted RBP5.98□□□□□ -1.45
SNX27-205ENST00000482791 PAPLNO95428 1278 aa5.98□□□□□ -1.45
SNX27-205ENST00000482791 ZNF865P0CJ78 1059 aaPredicted RBP5.98□□□□□ -1.45
SNX27-205ENST00000482791 ERCC3P19447 782 aa5.98□□□□□ -1.45
SNX27-205ENST00000482791 RANGAP1P46060 587 aaPredicted RBP5.98□□□□□ -1.45
SNX27-205ENST00000482791 PREPP48147 710 aa5.98□□□□□ -1.45
SNX27-205ENST00000482791 ATP2B2Q01814 1243 aa5.98□□□□□ -1.45
SNX27-205ENST00000482791 KLHDC7BQ96G42 594 aa5.98□□□□□ -1.45
SNX27-205ENST00000482791 CEP41Q9BYV8 373 aa5.98□□□□□ -1.45
SNX27-205ENST00000482791 ZNF576Q9H609 170 aa5.98□□□□□ -1.45
SNX27-205ENST00000482791 ABCB6Q9NP58 842 aa5.98□□□□□ -1.45
SNX27-205ENST00000482791 PPP4R2Q9NY27 417 aa5.98□□□□□ -1.45
SNX27-205ENST00000482791 CARMIL2Q6F5E8 1435 aa5.98□□□□□ -1.45
SNX27-205ENST00000482791 TMEM238LA0A1B0GVL6 79 aa5.97□□□□□ -1.45
SNX27-205ENST00000482791 METTL12A8MUP2 240 aa5.97□□□□□ -1.45
SNX27-205ENST00000482791 B3GALT4O96024 378 aa5.97□□□□□ -1.45
SNX27-205ENST00000482791 PRNPP04156 253 aa5.97□□□□□ -1.45
SNX27-205ENST00000482791 F13BP05160 661 aa5.97□□□□□ -1.45
SNX27-205ENST00000482791 CDC25BP30305 580 aa5.97□□□□□ -1.45
SNX27-205ENST00000482791 PCDH1Q08174 1060 aa5.97□□□□□ -1.45
SNX27-205ENST00000482791 GRM2Q14416 872 aa5.97□□□□□ -1.45
SNX27-205ENST00000482791 NPM2Q86SE8 214 aaKnown RBP5.97□□□□□ -1.45
SNX27-205ENST00000482791 GLIS3Q8NEA6 775 aa5.97□□□□□ -1.45
SNX27-205ENST00000482791 DDX54Q8TDD1 881 aaKnown RBP5.97□□□□□ -1.45
SNX27-205ENST00000482791 EPS8L3Q8TE67 593 aaKnown RBP5.97□□□□□ -1.45
SNX27-205ENST00000482791 FRMD6Q96NE9 622 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms