RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 SBF2Q86WG5 1849 aa17.39■□□□□ 0.37
ATG4B-220ENST00000482507 EVCP57679 992 aa17.39■□□□□ 0.37
ATG4B-220ENST00000482507 TCIRG1Q13488 830 aa17.39■□□□□ 0.37
ATG4B-220ENST00000482507 TXNRD1Q16881 649 aa17.39■□□□□ 0.37
ATG4B-220ENST00000482507 PI16Q6UXB8 463 aa17.39■□□□□ 0.37
ATG4B-220ENST00000482507 FAM160A1Q05DH4 1040 aa17.38■□□□□ 0.37
ATG4B-220ENST00000482507 STX1AQ16623 288 aa17.38■□□□□ 0.37
ATG4B-220ENST00000482507 GIGYF2Q6Y7W6 1299 aaKnown RBP17.38■□□□□ 0.37
ATG4B-220ENST00000482507 TICAM2Q86XR7 235 aa17.38■□□□□ 0.37
ATG4B-220ENST00000482507 DHX40Q8IX18 779 aaKnown RBP17.38■□□□□ 0.37
ATG4B-220ENST00000482507 SYNE4Q8N205 404 aa17.38■□□□□ 0.37
ATG4B-220ENST00000482507 FSIP1Q8NA03 581 aa17.38■□□□□ 0.37
ATG4B-220ENST00000482507 XAGE2Q96GT9 111 aa17.38■□□□□ 0.37
ATG4B-220ENST00000482507 ISCA1Q9BUE6 129 aa17.38■□□□□ 0.37
ATG4B-220ENST00000482507 CEP126Q9P2H0 1117 aa17.38■□□□□ 0.37
ATG4B-220ENST00000482507 PCDHA7Q9UN72 937 aa17.38■□□□□ 0.37
ATG4B-220ENST00000482507 MYH14Q7Z406 1995 aaKnown RBP17.38■□□□□ 0.37
ATG4B-220ENST00000482507 ME1P48163 572 aa17.38■□□□□ 0.37
ATG4B-220ENST00000482507 SARM1Q6SZW1 724 aa17.38■□□□□ 0.37
ATG4B-220ENST00000482507 RAB11FIP4Q86YS3 637 aa17.38■□□□□ 0.37
ATG4B-220ENST00000482507 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.38■□□□□ 0.37
ATG4B-220ENST00000482507 C16orf45Q96MC5 204 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-220ENST00000482507 ZNF396Q96N95 335 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-220ENST00000482507 GJB4Q9NTQ9 266 aa17.38■□□□□ 0.37
ATG4B-220ENST00000482507 CAVIN2O95810 425 aa17.37■□□□□ 0.37
ATG4B-220ENST00000482507 FGAP02671 866 aa17.37■□□□□ 0.37
ATG4B-220ENST00000482507 CCDC73Q6ZRK6 1079 aa17.37■□□□□ 0.37
ATG4B-220ENST00000482507 FBXL16Q8N461 479 aa17.37■□□□□ 0.37
ATG4B-220ENST00000482507 PUS7LQ9H0K6 701 aaKnown RBP17.37■□□□□ 0.37
ATG4B-220ENST00000482507 SRP68Q9UHB9 627 aaKnown RBP17.37■□□□□ 0.37
ATG4B-220ENST00000482507 HPS5Q9UPZ3 1129 aa17.37■□□□□ 0.37
ATG4B-220ENST00000482507 SPEF2Q9C093 1822 aa17.37■□□□□ 0.37
ATG4B-220ENST00000482507 CTAGE5O15320 804 aa17.37■□□□□ 0.37
ATG4B-220ENST00000482507 CDC25BP30305 580 aa17.37■□□□□ 0.37
ATG4B-220ENST00000482507 ANTXR2P58335 489 aa17.37■□□□□ 0.37
ATG4B-220ENST00000482507 CCDC94Q9BW85 323 aaPredicted RBP17.37■□□□□ 0.37
ATG4B-220ENST00000482507 CAMTA2O94983 1202 aa17.36■□□□□ 0.37
ATG4B-220ENST00000482507 ZAP70P43403 619 aa17.36■□□□□ 0.37
ATG4B-220ENST00000482507 WASHC4Q2M389 1173 aa17.36■□□□□ 0.37
ATG4B-220ENST00000482507 TTC39AQ5SRH9 613 aa17.36■□□□□ 0.37
ATG4B-220ENST00000482507 ATL3Q6DD88 541 aa17.36■□□□□ 0.37
ATG4B-220ENST00000482507 FMR1NBQ8N0W7 255 aaPredicted RBP17.36■□□□□ 0.37
ATG4B-220ENST00000482507 NKX2-3Q8TAU0 364 aa17.36■□□□□ 0.37
ATG4B-220ENST00000482507 CLIC4Q9Y696 253 aa17.36■□□□□ 0.37
ATG4B-220ENST00000482507 CNTNAP4Q9C0A0 1308 aa17.36■□□□□ 0.37
ATG4B-220ENST00000482507 KINO60870 393 aaKnown RBP17.36■□□□□ 0.37
ATG4B-220ENST00000482507 MB21D2Q8IYB1 491 aaPredicted RBP17.36■□□□□ 0.37
ATG4B-220ENST00000482507 FBXW7Q969H0 707 aa17.36■□□□□ 0.37
ATG4B-220ENST00000482507 FAM89AQ96GI7 184 aa17.36■□□□□ 0.37
ATG4B-220ENST00000482507 RTEL1Q9NZ71 1219 aa17.36■□□□□ 0.37
ATG4B-220ENST00000482507 RTCBQ9Y3I0 505 aaKnown RBP17.36■□□□□ 0.37
ATG4B-220ENST00000482507 A0A1B0GVL5 298 aa17.35■□□□□ 0.37
ATG4B-220ENST00000482507 GOLGA6L19H0YKK7 550 aa17.35■□□□□ 0.37
ATG4B-220ENST00000482507 CTIFO43310 598 aaKnown RBP17.35■□□□□ 0.37
ATG4B-220ENST00000482507 RPS6KA4O75676 772 aa17.35■□□□□ 0.37
ATG4B-220ENST00000482507 CCDC57Q2TAC2 916 aa17.35■□□□□ 0.37
ATG4B-220ENST00000482507 ARHGEF1Q92888 912 aaKnown RBP17.35■□□□□ 0.37
ATG4B-220ENST00000482507 AK7Q96M32 723 aa17.35■□□□□ 0.37
ATG4B-220ENST00000482507 DENND2AQ9ULE3 1009 aa17.35■□□□□ 0.37
ATG4B-220ENST00000482507 NEDD4P46934 1319 aa17.35■□□□□ 0.37
ATG4B-220ENST00000482507 PRC1O43663 620 aa17.35■□□□□ 0.37
ATG4B-220ENST00000482507 EN1Q05925 392 aaPredicted RBP17.35■□□□□ 0.37
ATG4B-220ENST00000482507 CHAF1AQ13111 956 aaPredicted RBP17.35■□□□□ 0.37
ATG4B-220ENST00000482507 CCDC158Q5M9N0 1113 aa17.35■□□□□ 0.37
ATG4B-220ENST00000482507 BICDL1Q6ZP65 573 aa17.35■□□□□ 0.37
ATG4B-220ENST00000482507 MRFAP1L1Q96HT8 127 aa17.35■□□□□ 0.37
ATG4B-220ENST00000482507 KLF18A0A0U1RQI7 1052 aa17.34■□□□□ 0.37
ATG4B-220ENST00000482507 POLR3DP05423 398 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-220ENST00000482507 NDUFA8P51970 172 aa17.34■□□□□ 0.37
ATG4B-220ENST00000482507 GORABQ5T7V8 394 aa17.34■□□□□ 0.37
ATG4B-220ENST00000482507 RC3H1Q5TC82 1133 aaKnown RBP17.34■□□□□ 0.37
ATG4B-220ENST00000482507 LRRC8AQ8IWT6 810 aa17.34■□□□□ 0.37
ATG4B-220ENST00000482507 LINC00301Q8NCQ3 95 aa17.34■□□□□ 0.37
ATG4B-220ENST00000482507 USP27XA6NNY8 438 aa17.33■□□□□ 0.37
ATG4B-220ENST00000482507 KIF28PB7ZC32 967 aa17.33■□□□□ 0.37
ATG4B-220ENST00000482507 IMMTQ16891 758 aaKnown RBP17.33■□□□□ 0.37
ATG4B-220ENST00000482507 MRPS27Q92552 414 aaKnown RBP17.33■□□□□ 0.37
ATG4B-220ENST00000482507 ERVV-1B6SEH8 477 aa17.33■□□□□ 0.36
ATG4B-220ENST00000482507 PLSCR1O15162 318 aa17.33■□□□□ 0.36
ATG4B-220ENST00000482507 SLC27A3Q5K4L6 730 aa17.33■□□□□ 0.36
ATG4B-220ENST00000482507 NLRP10Q86W26 655 aa17.33■□□□□ 0.36
ATG4B-220ENST00000482507 AOPEPQ8N6M6 819 aa17.33■□□□□ 0.36
ATG4B-220ENST00000482507 ANKRD7Q92527 254 aa17.33■□□□□ 0.36
ATG4B-220ENST00000482507 NBPF3Q9H094 633 aa17.33■□□□□ 0.36
ATG4B-220ENST00000482507 UBN2Q6ZU65 1347 aa17.33■□□□□ 0.36
ATG4B-220ENST00000482507 GOLGA8BA8MQT2 603 aa17.32■□□□□ 0.36
ATG4B-220ENST00000482507 TNNT1P13805 278 aa17.32■□□□□ 0.36
ATG4B-220ENST00000482507 ADALQ6DHV7 355 aa17.32■□□□□ 0.36
ATG4B-220ENST00000482507 FBXO18Q8NFZ0 1043 aa17.32■□□□□ 0.36
ATG4B-220ENST00000482507 ANO10Q9NW15 660 aa17.32■□□□□ 0.36
ATG4B-220ENST00000482507 CTNNA3Q9UI47 895 aa17.32■□□□□ 0.36
ATG4B-220ENST00000482507 RIC1Q4ADV7 1423 aa17.32■□□□□ 0.36
ATG4B-220ENST00000482507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.32■□□□□ 0.36
ATG4B-220ENST00000482507 EZH2Q15910 746 aaKnown RBP17.32■□□□□ 0.36
ATG4B-220ENST00000482507 ATP2B3Q16720 1220 aa17.32■□□□□ 0.36
ATG4B-220ENST00000482507 DEFB132Q7Z7B7 95 aa17.32■□□□□ 0.36
ATG4B-220ENST00000482507 APPBP2Q92624 585 aa17.32■□□□□ 0.36
ATG4B-220ENST00000482507 C8orf76Q96K31 380 aa17.32■□□□□ 0.36
ATG4B-220ENST00000482507 ORC3Q9UBD5 711 aaPredicted RBP17.32■□□□□ 0.36
ATG4B-220ENST00000482507 BECN2A8MW95 431 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms