RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 ZBTB39O15060 712 aa10.08□□□□□ -0.8
LINC00888-203ENST00000482098 MTFR1Q15390 333 aa10.08□□□□□ -0.8
LINC00888-203ENST00000482098 ANKRD13DQ6ZTN6 518 aa10.08□□□□□ -0.8
LINC00888-203ENST00000482098 TTC16Q8NEE8 873 aa10.08□□□□□ -0.8
LINC00888-203ENST00000482098 EDEM1Q92611 657 aa10.08□□□□□ -0.8
LINC00888-203ENST00000482098 KLRG1Q96E93 195 aa10.08□□□□□ -0.8
LINC00888-203ENST00000482098 CSRNP1Q96S65 589 aa10.08□□□□□ -0.8
LINC00888-203ENST00000482098 IL21Q9HBE4 155 aa10.08□□□□□ -0.8
LINC00888-203ENST00000482098 ANKRD36BQ8N2N9 1353 aa10.08□□□□□ -0.8
LINC00888-203ENST00000482098 NFAT5O94916 1531 aa10.07□□□□□ -0.8
LINC00888-203ENST00000482098 PIK3C2AO00443 1686 aa10.07□□□□□ -0.8
LINC00888-203ENST00000482098 ST18O60284 1047 aa10.07□□□□□ -0.8
LINC00888-203ENST00000482098 RBL2Q08999 1139 aa10.07□□□□□ -0.8
LINC00888-203ENST00000482098 DDX41Q9UJV9 622 aaKnown RBP10.07□□□□□ -0.8
LINC00888-203ENST00000482098 CCNL1Q9UK58 526 aaPredicted RBP10.07□□□□□ -0.8
LINC00888-203ENST00000482098 USP31Q70CQ4 1352 aa10.06□□□□□ -0.8
LINC00888-203ENST00000482098 S1PR4O95977 384 aa10.06□□□□□ -0.8
LINC00888-203ENST00000482098 EIF4BP23588 611 aaKnown RBP10.06□□□□□ -0.8
LINC00888-203ENST00000482098 FSTL1Q12841 308 aa10.06□□□□□ -0.8
LINC00888-203ENST00000482098 ARID5BQ14865 1188 aa10.06□□□□□ -0.8
LINC00888-203ENST00000482098 USP48Q86UV5 1035 aa10.06□□□□□ -0.8
LINC00888-203ENST00000482098 TMPRSS4Q9NRS4 437 aa10.06□□□□□ -0.8
LINC00888-203ENST00000482098 PDGFAP04085 211 aa10.05□□□□□ -0.8
LINC00888-203ENST00000482098 C11orf91Q3C1V1 193 aa10.05□□□□□ -0.8
LINC00888-203ENST00000482098 THSD4Q6ZMP0 1018 aa10.05□□□□□ -0.8
LINC00888-203ENST00000482098 HS2ST1Q7LGA3 356 aa10.05□□□□□ -0.8
LINC00888-203ENST00000482098 NBPF15Q8N660 670 aa10.05□□□□□ -0.8
LINC00888-203ENST00000482098 HS3ST6Q96QI5 342 aa10.05□□□□□ -0.8
LINC00888-203ENST00000482098 DNAJC25Q9H1X3 360 aa10.05□□□□□ -0.8
LINC00888-203ENST00000482098 ZSWIM4Q9H7M6 989 aa10.05□□□□□ -0.8
LINC00888-203ENST00000482098 EVC2Q86UK5 1308 aa10.05□□□□□ -0.8
LINC00888-203ENST00000482098 CDK2AP1O14519 115 aa10.04□□□□□ -0.8
LINC00888-203ENST00000482098 STK10O94804 968 aaKnown RBP10.04□□□□□ -0.8
LINC00888-203ENST00000482098 ZAP70P43403 619 aa10.04□□□□□ -0.8
LINC00888-203ENST00000482098 DDX54Q8TDD1 881 aaKnown RBP10.04□□□□□ -0.8
LINC00888-203ENST00000482098 ANKRD24Q8TF21 1146 aa10.04□□□□□ -0.8
LINC00888-203ENST00000482098 L3MBTL2Q969R5 705 aa10.04□□□□□ -0.8
LINC00888-203ENST00000482098 CHMP4AQ9BY43 222 aa10.04□□□□□ -0.8
LINC00888-203ENST00000482098 IGSF1Q8N6C5 1336 aa10.04□□□□□ -0.8
LINC00888-203ENST00000482098 NSD2O96028 1365 aa10.03□□□□□ -0.8
LINC00888-203ENST00000482098 QRICH2Q9H0J4 1663 aa10.03□□□□□ -0.8
LINC00888-203ENST00000482098 SERTM1A2A2V5 107 aa10.03□□□□□ -0.8
LINC00888-203ENST00000482098 EIF1AYO14602 144 aaKnown RBP10.03□□□□□ -0.8
LINC00888-203ENST00000482098 CTSHP09668 335 aa10.03□□□□□ -0.8
LINC00888-203ENST00000482098 FSHRP23945 695 aa10.03□□□□□ -0.8
LINC00888-203ENST00000482098 ZEB1P37275 1124 aaPredicted RBP10.03□□□□□ -0.8
LINC00888-203ENST00000482098 NBPF1Q3BBV0 1214 aa10.03□□□□□ -0.8
LINC00888-203ENST00000482098 ZNF394Q53GI3 561 aa10.03□□□□□ -0.8
LINC00888-203ENST00000482098 SDE2Q6IQ49 451 aa10.03□□□□□ -0.8
LINC00888-203ENST00000482098 ZNF662Q6ZS27 426 aa10.03□□□□□ -0.8
LINC00888-203ENST00000482098 ZNF516Q92618 1163 aa10.03□□□□□ -0.8
LINC00888-203ENST00000482098 PCDHGB7Q9Y5F8 929 aa10.03□□□□□ -0.8
LINC00888-203ENST00000482098 USP47Q96K76 1375 aa10.02□□□□□ -0.8
LINC00888-203ENST00000482098 RPLP1P05386 114 aaKnown RBP10.02□□□□□ -0.81
LINC00888-203ENST00000482098 KCNQ4P56696 695 aa10.02□□□□□ -0.81
LINC00888-203ENST00000482098 WNT7BP56706 349 aa10.02□□□□□ -0.81
LINC00888-203ENST00000482098 DGKZQ13574 1117 aa10.02□□□□□ -0.81
LINC00888-203ENST00000482098 RTN1Q16799 776 aa10.02□□□□□ -0.81
LINC00888-203ENST00000482098 MSL1Q68DK7 614 aa10.02□□□□□ -0.81
LINC00888-203ENST00000482098 PPP1R18Q6NYC8 613 aa10.02□□□□□ -0.81
LINC00888-203ENST00000482098 ETFBKMTQ8IXQ9 262 aa10.02□□□□□ -0.81
LINC00888-203ENST00000482098 SYTL4Q96C24 671 aaPredicted RBP10.02□□□□□ -0.81
LINC00888-203ENST00000482098 IFT43Q96FT9 208 aa10.02□□□□□ -0.81
LINC00888-203ENST00000482098 CFHR5Q9BXR6 569 aa10.02□□□□□ -0.81
LINC00888-203ENST00000482098 GGT7Q9UJ14 662 aa10.02□□□□□ -0.81
LINC00888-203ENST00000482098 ZNF232Q9UNY5 417 aa10.02□□□□□ -0.81
LINC00888-203ENST00000482098 CICQ96RK0 1608 aaPredicted RBP10.02□□□□□ -0.81
LINC00888-203ENST00000482098 KAT6BQ8WYB5 2073 aa10.02□□□□□ -0.81
LINC00888-203ENST00000482098 GIPC1O14908 333 aa10.01□□□□□ -0.81
LINC00888-203ENST00000482098 HIRAP54198 1017 aaPredicted RBP10.01□□□□□ -0.81
LINC00888-203ENST00000482098 RACK1P63244 317 aaKnown RBP10.01□□□□□ -0.81
LINC00888-203ENST00000482098 PTPN12Q05209 780 aaKnown RBP10.01□□□□□ -0.81
LINC00888-203ENST00000482098 TRIM32Q13049 653 aa10.01□□□□□ -0.81
LINC00888-203ENST00000482098 ORC1Q13415 861 aa10.01□□□□□ -0.81
LINC00888-203ENST00000482098 TLR1Q15399 786 aa10.01□□□□□ -0.81
LINC00888-203ENST00000482098 TJAP1Q5JTD0 557 aa10.01□□□□□ -0.81
LINC00888-203ENST00000482098 FAM26DQ5JW98 314 aa10.01□□□□□ -0.81
LINC00888-203ENST00000482098 XAGE2Q96GT9 111 aa10.01□□□□□ -0.81
LINC00888-203ENST00000482098 FAM13BQ9NYF5 915 aa10.01□□□□□ -0.81
LINC00888-203ENST00000482098 CGNL1Q0VF96 1302 aa10.01□□□□□ -0.81
LINC00888-203ENST00000482098 RGPD5Q99666 1765 aa10.01□□□□□ -0.81
LINC00888-203ENST00000482098 KTN1Q86UP2 1357 aaKnown RBP10.01□□□□□ -0.81
LINC00888-203ENST00000482098 NSD3Q9BZ95 1437 aa10□□□□□ -0.81
LINC00888-203ENST00000482098 LY75O60449 1722 aa10□□□□□ -0.81
LINC00888-203ENST00000482098 EML1O00423 815 aa10□□□□□ -0.81
LINC00888-203ENST00000482098 TEAD4Q15561 434 aa10□□□□□ -0.81
LINC00888-203ENST00000482098 C8orf34Q49A92 452 aa10□□□□□ -0.81
LINC00888-203ENST00000482098 ALDH16A1Q8IZ83 802 aa10□□□□□ -0.81
LINC00888-203ENST00000482098 EHBP1Q8NDI1 1231 aa10□□□□□ -0.81
LINC00888-203ENST00000482098 ZCRB1Q8TBF4 217 aaKnown RBP10□□□□□ -0.81
LINC00888-203ENST00000482098 IP6K1Q92551 441 aa10□□□□□ -0.81
LINC00888-203ENST00000482098 CDK15Q96Q40 435 aa10□□□□□ -0.81
LINC00888-203ENST00000482098 OSBPL2Q9H1P3 480 aa10□□□□□ -0.81
LINC00888-203ENST00000482098 ARHGEF10LQ9HCE6 1279 aa10□□□□□ -0.81
LINC00888-203ENST00000482098 RAB6BQ9NRW1 208 aa10□□□□□ -0.81
LINC00888-203ENST00000482098 WDR3Q9UNX4 943 aaKnown RBP eCLIP10□□□□□ -0.81
LINC00888-203ENST00000482098 TUBGCP6Q96RT7 1819 aa10□□□□□ -0.81
LINC00888-203ENST00000482098 C10orf71Q711Q0 1435 aa9.99□□□□□ -0.81
LINC00888-203ENST00000482098 LILRA1O75019 489 aa9.99□□□□□ -0.81
LINC00888-203ENST00000482098 CPNE3O75131 537 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms