RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 GGA1Q9UJY5 639 aa13.87□□□□□ -0.19
GGPS1-205ENST00000482013 COL1A1P02452 1464 aaPredicted RBP13.87□□□□□ -0.19
GGPS1-205ENST00000482013 WTIPA6NIX2 430 aaPredicted RBP13.86□□□□□ -0.19
GGPS1-205ENST00000482013 MBD4O95243 580 aa13.86□□□□□ -0.19
GGPS1-205ENST00000482013 MMP10P09238 476 aa13.86□□□□□ -0.19
GGPS1-205ENST00000482013 SRGNP10124 158 aa13.86□□□□□ -0.19
GGPS1-205ENST00000482013 GPSM2P81274 684 aa13.86□□□□□ -0.19
GGPS1-205ENST00000482013 EZH2Q15910 746 aaKnown RBP13.86□□□□□ -0.19
GGPS1-205ENST00000482013 ME3Q16798 604 aa13.86□□□□□ -0.19
GGPS1-205ENST00000482013 TTLL5Q6EMB2 1281 aa13.86□□□□□ -0.19
GGPS1-205ENST00000482013 MASTLQ96GX5 879 aa13.86□□□□□ -0.19
GGPS1-205ENST00000482013 ABCF2Q9UG63 623 aa13.86□□□□□ -0.19
GGPS1-205ENST00000482013 TPCN1Q9ULQ1 816 aa13.86□□□□□ -0.19
GGPS1-205ENST00000482013 SMC3Q9UQE7 1217 aa13.86□□□□□ -0.19
GGPS1-205ENST00000482013 ATP6V0A2Q9Y487 856 aa13.86□□□□□ -0.19
GGPS1-205ENST00000482013 LTBP1Q14766 1721 aa13.86□□□□□ -0.19
GGPS1-205ENST00000482013 MAGEB6P1A0A0J9YX57 407 aa13.85□□□□□ -0.19
GGPS1-205ENST00000482013 GOLGA6L22H0YM25 854 aa13.85□□□□□ -0.19
GGPS1-205ENST00000482013 PPEF1O14829 653 aaPredicted RBP13.85□□□□□ -0.19
GGPS1-205ENST00000482013 BRD1O95696 1058 aa13.85□□□□□ -0.19
GGPS1-205ENST00000482013 APPP05067 770 aa13.85□□□□□ -0.19
GGPS1-205ENST00000482013 EVCP57679 992 aa13.85□□□□□ -0.19
GGPS1-205ENST00000482013 EN1Q05925 392 aaPredicted RBP13.85□□□□□ -0.19
GGPS1-205ENST00000482013 TRDNQ13061 729 aa13.85□□□□□ -0.19
GGPS1-205ENST00000482013 NAA16Q6N069 864 aaPredicted RBP13.85□□□□□ -0.19
GGPS1-205ENST00000482013 GIMAP6Q6P9H5 292 aa13.85□□□□□ -0.19
GGPS1-205ENST00000482013 Q6ZUG5 572 aa13.85□□□□□ -0.19
GGPS1-205ENST00000482013 IFNL3Q8IZI9 196 aa13.85□□□□□ -0.19
GGPS1-205ENST00000482013 IQSEC3Q9UPP2 1182 aaPredicted RBP13.85□□□□□ -0.19
GGPS1-205ENST00000482013 CHD4Q14839 1912 aa13.85□□□□□ -0.19
GGPS1-205ENST00000482013 GSG1L2A8MUP6 293 aa13.84□□□□□ -0.19
GGPS1-205ENST00000482013 UFL1O94874 794 aa13.84□□□□□ -0.19
GGPS1-205ENST00000482013 IL1R1P14778 569 aa13.84□□□□□ -0.19
GGPS1-205ENST00000482013 KLRK1P26718 216 aa13.84□□□□□ -0.19
GGPS1-205ENST00000482013 MCM5P33992 734 aa13.84□□□□□ -0.19
GGPS1-205ENST00000482013 FGD1P98174 961 aa13.84□□□□□ -0.19
GGPS1-205ENST00000482013 TXNRD3Q86VQ6 643 aa13.84□□□□□ -0.19
GGPS1-205ENST00000482013 CCDC125Q86Z20 511 aa13.84□□□□□ -0.19
GGPS1-205ENST00000482013 CERS3Q8IU89 383 aa13.84□□□□□ -0.19
GGPS1-205ENST00000482013 NSUN4Q96CB9 384 aaKnown RBP13.84□□□□□ -0.19
GGPS1-205ENST00000482013 ZNF274Q96GC6 653 aaPredicted RBP13.84□□□□□ -0.19
GGPS1-205ENST00000482013 MTA3Q9BTC8 594 aa13.84□□□□□ -0.19
GGPS1-205ENST00000482013 NAPBQ9H115 298 aa13.84□□□□□ -0.19
GGPS1-205ENST00000482013 CNNM2Q9H8M5 875 aa13.84□□□□□ -0.19
GGPS1-205ENST00000482013 NSFL1CQ9UNZ2 370 aaKnown RBP13.84□□□□□ -0.19
GGPS1-205ENST00000482013 WDR33Q9C0J8 1336 aaKnown RBP13.84□□□□□ -0.19
GGPS1-205ENST00000482013 LARGE1O95461 756 aa13.83□□□□□ -0.2
GGPS1-205ENST00000482013 GSTO1P78417 241 aa13.83□□□□□ -0.2
GGPS1-205ENST00000482013 SKOR2Q2VWA4 1001 aaPredicted RBP13.83□□□□□ -0.2
GGPS1-205ENST00000482013 STYK1Q6J9G0 422 aa13.83□□□□□ -0.2
GGPS1-205ENST00000482013 RALYLQ86SE5 291 aaKnown RBP13.83□□□□□ -0.2
GGPS1-205ENST00000482013 CCDC83Q8IWF9 413 aa13.83□□□□□ -0.2
GGPS1-205ENST00000482013 MB21D2Q8IYB1 491 aaPredicted RBP13.83□□□□□ -0.2
GGPS1-205ENST00000482013 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.2
GGPS1-205ENST00000482013 LLPHQ9BRT6 129 aaKnown RBP13.83□□□□□ -0.2
GGPS1-205ENST00000482013 TMX4Q9H1E5 349 aaPredicted RBP13.83□□□□□ -0.2
GGPS1-205ENST00000482013 ARMT1Q9H993 441 aa13.83□□□□□ -0.2
GGPS1-205ENST00000482013 CD209Q9NNX6 404 aa13.83□□□□□ -0.2
GGPS1-205ENST00000482013 ZDHHC9Q9Y397 364 aa13.83□□□□□ -0.2
GGPS1-205ENST00000482013 SLC4A4Q9Y6R1 1079 aa13.83□□□□□ -0.2
GGPS1-205ENST00000482013 TIAM2Q8IVF5 1701 aa13.83□□□□□ -0.2
GGPS1-205ENST00000482013 PFKFB2O60825 505 aa13.82□□□□□ -0.2
GGPS1-205ENST00000482013 BAG4O95429 457 aaKnown RBP13.82□□□□□ -0.2
GGPS1-205ENST00000482013 LDHCP07864 332 aa13.82□□□□□ -0.2
GGPS1-205ENST00000482013 PDCP20941 246 aa13.82□□□□□ -0.2
GGPS1-205ENST00000482013 MECOMQ03112 1051 aa13.82□□□□□ -0.2
GGPS1-205ENST00000482013 LCORLQ8N3X6 602 aa13.82□□□□□ -0.2
GGPS1-205ENST00000482013 TBC1D16Q8TBP0 767 aa13.82□□□□□ -0.2
GGPS1-205ENST00000482013 SLC16A10Q8TF71 515 aa13.82□□□□□ -0.2
GGPS1-205ENST00000482013 TBC1D22AQ8WUA7 517 aa13.82□□□□□ -0.2
GGPS1-205ENST00000482013 BRF1Q92994 677 aa13.82□□□□□ -0.2
GGPS1-205ENST00000482013 ANO8Q9HCE9 1232 aaPredicted RBP13.82□□□□□ -0.2
GGPS1-205ENST00000482013 ANAPC4Q9UJX5 808 aa13.82□□□□□ -0.2
GGPS1-205ENST00000482013 H0YIN7 160 aa13.81□□□□□ -0.2
GGPS1-205ENST00000482013 LDHBP07195 334 aaKnown RBP13.81□□□□□ -0.2
GGPS1-205ENST00000482013 PCP11498 1178 aaKnown RBP13.81□□□□□ -0.2
GGPS1-205ENST00000482013 HAND2P61296 217 aa13.81□□□□□ -0.2
GGPS1-205ENST00000482013 CHAF1AQ13111 956 aaPredicted RBP13.81□□□□□ -0.2
GGPS1-205ENST00000482013 GTF3C6Q969F1 213 aa13.81□□□□□ -0.2
GGPS1-205ENST00000482013 TMEM87BQ96K49 555 aa13.81□□□□□ -0.2
GGPS1-205ENST00000482013 TCEANC2Q96MN5 208 aa13.81□□□□□ -0.2
GGPS1-205ENST00000482013 LARP6Q9BRS8 491 aaKnown RBP13.81□□□□□ -0.2
GGPS1-205ENST00000482013 KRT23Q9C075 422 aa13.81□□□□□ -0.2
GGPS1-205ENST00000482013 COA1Q9GZY4 146 aa13.81□□□□□ -0.2
GGPS1-205ENST00000482013 RNF41Q9H4P4 317 aaPredicted RBP13.81□□□□□ -0.2
GGPS1-205ENST00000482013 EPB41L4AQ9HCS5 686 aaPredicted RBP13.81□□□□□ -0.2
GGPS1-205ENST00000482013 POLLQ9UGP5 575 aa13.81□□□□□ -0.2
GGPS1-205ENST00000482013 COL11A2P13942 1736 aaPredicted RBP13.81□□□□□ -0.2
GGPS1-205ENST00000482013 A0A0G2JLW4 131 aa13.8□□□□□ -0.2
GGPS1-205ENST00000482013 PRC1O43663 620 aa13.8□□□□□ -0.2
GGPS1-205ENST00000482013 GJB2P29033 226 aa13.8□□□□□ -0.2
GGPS1-205ENST00000482013 TDO2P48775 406 aa13.8□□□□□ -0.2
GGPS1-205ENST00000482013 NT5C2P49902 561 aa13.8□□□□□ -0.2
GGPS1-205ENST00000482013 ST3GAL1Q11201 340 aa13.8□□□□□ -0.2
GGPS1-205ENST00000482013 COL9A3Q14050 684 aaPredicted RBP13.8□□□□□ -0.2
GGPS1-205ENST00000482013 AKNAD1Q5T1N1 836 aa13.8□□□□□ -0.2
GGPS1-205ENST00000482013 SLF2Q8IX21 1173 aa13.8□□□□□ -0.2
GGPS1-205ENST00000482013 MPNDQ8N594 471 aa13.8□□□□□ -0.2
GGPS1-205ENST00000482013 STAG1Q8WVM7 1258 aa13.8□□□□□ -0.2
GGPS1-205ENST00000482013 CRNKL1Q9BZJ0 848 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms