RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 NRSN2Q9GZP1 204 aa7.48□□□□□ -1.21
CHCHD3-205ENST00000481152 STOML1Q9UBI4 398 aa7.48□□□□□ -1.21
CHCHD3-205ENST00000481152 GADD45BO75293 160 aaPredicted RBP7.47□□□□□ -1.21
CHCHD3-205ENST00000481152 DLGAP3O95886 979 aa7.47□□□□□ -1.21
CHCHD3-205ENST00000481152 RBM25P49756 843 aaKnown RBP7.47□□□□□ -1.21
CHCHD3-205ENST00000481152 TMCO4Q5TGY1 634 aa7.47□□□□□ -1.21
CHCHD3-205ENST00000481152 NUTM2GQ5VZR2 741 aa7.47□□□□□ -1.21
CHCHD3-205ENST00000481152 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.47□□□□□ -1.21
CHCHD3-205ENST00000481152 SLC51AQ86UW1 340 aa7.47□□□□□ -1.21
CHCHD3-205ENST00000481152 PUS7Q96PZ0 661 aaKnown RBP7.47□□□□□ -1.21
CHCHD3-205ENST00000481152 ZNF576Q9H609 170 aa7.47□□□□□ -1.21
CHCHD3-205ENST00000481152 ABCB6Q9NP58 842 aa7.47□□□□□ -1.21
CHCHD3-205ENST00000481152 B3GALT4O96024 378 aa7.46□□□□□ -1.21
CHCHD3-205ENST00000481152 FAM20CQ8IXL6 584 aa7.46□□□□□ -1.21
CHCHD3-205ENST00000481152 SMG8Q8ND04 991 aaKnown RBP7.46□□□□□ -1.21
CHCHD3-205ENST00000481152 EPS8L3Q8TE67 593 aaKnown RBP7.46□□□□□ -1.21
CHCHD3-205ENST00000481152 SUGCTQ9HAC7 445 aa7.46□□□□□ -1.21
CHCHD3-205ENST00000481152 TRAK1Q9UPV9 953 aa7.46□□□□□ -1.21
CHCHD3-205ENST00000481152 SCRIBQ14160 1630 aa7.46□□□□□ -1.22
CHCHD3-205ENST00000481152 TREHO43280 583 aa7.46□□□□□ -1.22
CHCHD3-205ENST00000481152 MFAP1P55081 439 aaKnown RBP7.46□□□□□ -1.22
CHCHD3-205ENST00000481152 PTPN12Q05209 780 aaKnown RBP7.46□□□□□ -1.22
CHCHD3-205ENST00000481152 GRM2Q14416 872 aa7.46□□□□□ -1.22
CHCHD3-205ENST00000481152 DSC3Q14574 896 aa7.46□□□□□ -1.22
CHCHD3-205ENST00000481152 ARTNQ5T4W7 220 aa7.46□□□□□ -1.22
CHCHD3-205ENST00000481152 ZNF428Q96B54 188 aa7.46□□□□□ -1.22
CHCHD3-205ENST00000481152 C7orf69Q9H7B7 122 aa7.46□□□□□ -1.22
CHCHD3-205ENST00000481152 CYP4F12Q9HCS2 524 aa7.46□□□□□ -1.22
CHCHD3-205ENST00000481152 RNF112Q9ULX5 631 aa7.46□□□□□ -1.22
CHCHD3-205ENST00000481152 TMEM238LA0A1B0GVL6 79 aa7.45□□□□□ -1.22
CHCHD3-205ENST00000481152 GSC2O15499 205 aa7.45□□□□□ -1.22
CHCHD3-205ENST00000481152 GAS2O43903 313 aaKnown RBP7.45□□□□□ -1.22
CHCHD3-205ENST00000481152 TIAF1O95411 115 aa7.45□□□□□ -1.22
CHCHD3-205ENST00000481152 IGLV1-40P01703 118 aa7.45□□□□□ -1.22
CHCHD3-205ENST00000481152 CYP11A1P05108 521 aa7.45□□□□□ -1.22
CHCHD3-205ENST00000481152 BMP3P12645 472 aa7.45□□□□□ -1.22
CHCHD3-205ENST00000481152 LRP8Q14114 963 aa7.45□□□□□ -1.22
CHCHD3-205ENST00000481152 EXOSC6Q5RKV6 272 aaKnown RBP7.45□□□□□ -1.22
CHCHD3-205ENST00000481152 TRIM42Q8IWZ5 723 aa7.45□□□□□ -1.22
CHCHD3-205ENST00000481152 GLIS3Q8NEA6 775 aa7.45□□□□□ -1.22
CHCHD3-205ENST00000481152 HIF3AQ9Y2N7 669 aa7.45□□□□□ -1.22
CHCHD3-205ENST00000481152 HMX2A2RU54 273 aa7.44□□□□□ -1.22
CHCHD3-205ENST00000481152 MAOBP27338 520 aa7.44□□□□□ -1.22
CHCHD3-205ENST00000481152 PLCB3Q01970 1234 aa7.44□□□□□ -1.22
CHCHD3-205ENST00000481152 POU4F3Q15319 338 aa7.44□□□□□ -1.22
CHCHD3-205ENST00000481152 PI16Q6UXB8 463 aa7.44□□□□□ -1.22
CHCHD3-205ENST00000481152 CLEC10AQ8IUN9 316 aa7.44□□□□□ -1.22
CHCHD3-205ENST00000481152 C12orf50Q8NA57 414 aaPredicted RBP7.44□□□□□ -1.22
CHCHD3-205ENST00000481152 DDX54Q8TDD1 881 aaKnown RBP7.44□□□□□ -1.22
CHCHD3-205ENST00000481152 TRIM56Q9BRZ2 755 aaKnown RBP7.44□□□□□ -1.22
CHCHD3-205ENST00000481152 KCNF1Q9H3M0 494 aa7.44□□□□□ -1.22
CHCHD3-205ENST00000481152 ZFP64Q9NPA5 681 aa7.44□□□□□ -1.22
CHCHD3-205ENST00000481152 NLRP2Q9NX02 1062 aa7.44□□□□□ -1.22
CHCHD3-205ENST00000481152 EIF4G1Q04637 1599 aaKnown RBP7.43□□□□□ -1.22
CHCHD3-205ENST00000481152 PNMA6FA0A0J9YX94 578 aa7.43□□□□□ -1.22
CHCHD3-205ENST00000481152 CTSBP07858 339 aa7.43□□□□□ -1.22
CHCHD3-205ENST00000481152 NFIAQ12857 509 aa7.43□□□□□ -1.22
CHCHD3-205ENST00000481152 ENOX2Q16206 610 aaKnown RBP7.43□□□□□ -1.22
CHCHD3-205ENST00000481152 RPS26P11Q5JNZ5 115 aaPredicted RBP7.43□□□□□ -1.22
CHCHD3-205ENST00000481152 BEND4Q6ZU67 534 aa7.43□□□□□ -1.22
CHCHD3-205ENST00000481152 FAM83CQ9BQN1 747 aa7.43□□□□□ -1.22
CHCHD3-205ENST00000481152 DRD2P14416 443 aa7.42□□□□□ -1.22
CHCHD3-205ENST00000481152 SGO2Q562F6 1265 aa7.42□□□□□ -1.22
CHCHD3-205ENST00000481152 HP1BP3Q5SSJ5 553 aaPredicted RBP7.42□□□□□ -1.22
CHCHD3-205ENST00000481152 RNF43Q68DV7 783 aa7.42□□□□□ -1.22
CHCHD3-205ENST00000481152 ZSCAN29Q8IWY8 852 aaPredicted RBP7.42□□□□□ -1.22
CHCHD3-205ENST00000481152 CHMP4AQ9BY43 222 aa7.42□□□□□ -1.22
CHCHD3-205ENST00000481152 BAZ1AQ9NRL2 1556 aaPredicted RBP7.42□□□□□ -1.22
CHCHD3-205ENST00000481152 ECEL1O95672 775 aa7.41□□□□□ -1.22
CHCHD3-205ENST00000481152 MAP4P27816 1152 aaKnown RBP7.41□□□□□ -1.22
CHCHD3-205ENST00000481152 ASB16Q96NS5 453 aa7.41□□□□□ -1.22
CHCHD3-205ENST00000481152 DBNDD2Q9BQY9 259 aa7.41□□□□□ -1.22
CHCHD3-205ENST00000481152 CORO1BQ9BR76 489 aa7.41□□□□□ -1.22
CHCHD3-205ENST00000481152 GZF1Q9H116 711 aaPredicted RBP7.41□□□□□ -1.22
CHCHD3-205ENST00000481152 ZFYVE1Q9HBF4 777 aa7.41□□□□□ -1.22
CHCHD3-205ENST00000481152 PATL2C9JE40 543 aaKnown RBP7.4□□□□□ -1.22
CHCHD3-205ENST00000481152 HYAL3O43820 417 aaPredicted RBP7.4□□□□□ -1.22
CHCHD3-205ENST00000481152 ADH5P11766 374 aa7.4□□□□□ -1.22
CHCHD3-205ENST00000481152 FCGRTP55899 365 aa7.4□□□□□ -1.22
CHCHD3-205ENST00000481152 FMR1Q06787 632 aaKnown RBP eCLIP7.4□□□□□ -1.226e-11■■■■■ 70.7
CHCHD3-205ENST00000481152 SOX4Q06945 474 aaPredicted RBP7.4□□□□□ -1.22
CHCHD3-205ENST00000481152 FAAP100Q0VG06 881 aa7.4□□□□□ -1.22
CHCHD3-205ENST00000481152 AP3B2Q13367 1082 aa7.4□□□□□ -1.22
CHCHD3-205ENST00000481152 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.4□□□□□ -1.22
CHCHD3-205ENST00000481152 DTHD1Q6ZMT9 781 aa7.4□□□□□ -1.22
CHCHD3-205ENST00000481152 ZDHHC13Q8IUH4 622 aa7.4□□□□□ -1.22
CHCHD3-205ENST00000481152 C2CD4AQ8NCU7 369 aaPredicted RBP7.4□□□□□ -1.22
CHCHD3-205ENST00000481152 BCO2Q9BYV7 579 aa7.4□□□□□ -1.22
CHCHD3-205ENST00000481152 PPP4R2Q9NY27 417 aa7.39□□□□□ -1.23
CHCHD3-205ENST00000481152 WRNQ14191 1432 aaPredicted RBP eCLIP7.38□□□□□ -1.23
CHCHD3-205ENST00000481152 E9PSI1 815 aa7.38□□□□□ -1.23
CHCHD3-205ENST00000481152 TGFB1P01137 390 aa7.38□□□□□ -1.23
CHCHD3-205ENST00000481152 XRCC5P13010 732 aaKnown RBP7.38□□□□□ -1.23
CHCHD3-205ENST00000481152 RXRBP28702 533 aa7.38□□□□□ -1.23
CHCHD3-205ENST00000481152 MAPK8P45983 427 aa7.38□□□□□ -1.23
CHCHD3-205ENST00000481152 USP11P51784 963 aa7.38□□□□□ -1.23
CHCHD3-205ENST00000481152 ZNF157P51786 506 aaPredicted RBP7.38□□□□□ -1.23
CHCHD3-205ENST00000481152 NXPE4Q6UWF7 544 aa7.38□□□□□ -1.23
CHCHD3-205ENST00000481152 PDE3AQ14432 1141 aa7.37□□□□□ -1.23
CHCHD3-205ENST00000481152 AKAP4Q5JQC9 854 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms