RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 BAG6P46379 1132 aa13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 MTERF4Q7Z6M4 381 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 NLGN1Q8N2Q7 840 aa13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 MAP4K1Q92918 833 aa13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 GGA1Q9UJY5 639 aa13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 ZNF804BA4D1E1 1349 aa13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 CNTNAP4Q9C0A0 1308 aa13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 MRC1P22897 1456 aa13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 GOLGA8BA8MQT2 603 aa13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 CYP21A2P08686 494 aa13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 SF3A1Q15459 793 aaKnown RBP13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 ZSCAN29Q8IWY8 852 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 CCDC69A6NI79 296 aa13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 CIZ1Q9ULV3 898 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF3-209ENST00000479866 FGAP02671 866 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 POLR3DP05423 398 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 CAVIN1Q6NZI2 390 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 ZNF804AQ7Z570 1209 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 AMIGO3Q86WK7 504 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 NCOA7Q8NI08 942 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 ATP6V1DQ9Y5K8 247 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 COL18A1P39060 1754 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 B4E1Z4 1266 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 CTDSPL2Q05D32 466 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 DOK7Q18PE1 504 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 DENND2AQ9ULE3 1009 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 UQCRHLA0A096LP55 91 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 KLF18A0A0U1RQI7 1052 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 UQCRHP07919 91 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 ZMYM1Q5SVZ6 1142 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 MFSD6Q6ZSS7 791 aa13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 NCOA5Q9HCD5 579 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-209ENST00000479866 AHDC1Q5TGY3 1603 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 PRC1O43663 620 aa13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 PRKAB2O43741 272 aa13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 AXDND1Q5T1B0 1012 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 PRR5LQ6MZQ0 368 aa13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 BSDC1Q9NW68 430 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 TAF6LQ9Y6J9 622 aa13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 WDR33Q9C0J8 1336 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 USP42Q9H9J4 1324 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 LDHBP07195 334 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 PICALMQ13492 652 aa13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 SLC27A3Q5K4L6 730 aa13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 PARP4Q9UKK3 1724 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 HMGB2P26583 209 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 UBE4AQ14139 1066 aa13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 EZH2Q15910 746 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 TMEM67Q5HYA8 995 aa13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF3-209ENST00000479866 RPS6KB1P23443 525 aa13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 MKNK2Q9HBH9 465 aa13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 SH2B1Q9NRF2 756 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 MCM5P33992 734 aa13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 TRIM29Q14134 588 aa13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 DPP8Q6V1X1 898 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 DHX32Q7L7V1 743 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 FAM208AQ9UK61 1670 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 PLEKHG2Q9H7P9 1386 aa13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 HMGB1P09429 215 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 GYS1P13807 737 aa13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 KLRK1P26718 216 aa13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 GTF2IP78347 998 aa13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 BCL2L12Q9HB09 334 aa13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 MCM9Q9NXL9 1143 aa13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 TFIP11Q9UBB9 837 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-209ENST00000479866 E7EWF7 191 aa13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 H0YIN7 160 aa13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 PDCP20941 246 aa13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 DYNLL1P63167 89 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 NHSL1Q5SYE7 1610 aa13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 ABCC6O95255 1503 aa13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 A0A0G2JLW4 131 aa13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 BAG4O95429 457 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 SLC3A2P08195 630 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 NECTIN1Q15223 517 aa13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 C2CD5Q86YS7 1000 aa13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 BICD2Q8TD16 824 aa13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 KCPQ6ZWJ8 1503 aa13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 LETM1O95202 739 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 KIF20AO95235 890 aa13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 ZRSR1Q15695 479 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 ME3Q16798 604 aa13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 MYL10Q9BUA6 226 aa13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 INCENPQ9NQS7 918 aa13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 SAP30BPQ9UHR5 308 aaKnown RBP13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
RAPGEF3-209ENST00000479866 CARMIL3Q8ND23 1372 aa13.4□□□□□ -0.27
RAPGEF3-209ENST00000479866 ABCC12Q96J65 1359 aa13.4□□□□□ -0.27
RAPGEF3-209ENST00000479866 LRRC37A3O60309 1634 aa13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 SCN11AQ9UI33 1791 aa13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 STX6O43752 255 aa13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 GRAPQ13588 217 aa13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 GRAPLQ8TC17 118 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 CRNKL1Q9BZJ0 848 aaKnown RBP13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 LRP6O75581 1613 aa13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 ADD2P35612 726 aa13.39□□□□□ -0.27
RAPGEF3-209ENST00000479866 FAM173BQ6P4H8 233 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms