RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 IRS2Q9Y4H2 1338 aa11.66□□□□□ -0.54
RAD51B-208ENST00000479335 PFKFB2O60825 505 aa11.65□□□□□ -0.54
RAD51B-208ENST00000479335 SYT1P21579 422 aa11.65□□□□□ -0.54
RAD51B-208ENST00000479335 GJB2P29033 226 aa11.65□□□□□ -0.54
RAD51B-208ENST00000479335 MCM5P33992 734 aa11.65□□□□□ -0.54
RAD51B-208ENST00000479335 DEKP35659 375 aaKnown RBP11.65□□□□□ -0.54
RAD51B-208ENST00000479335 ST3GAL1Q11201 340 aa11.65□□□□□ -0.54
RAD51B-208ENST00000479335 TRDNQ13061 729 aa11.65□□□□□ -0.54
RAD51B-208ENST00000479335 GTF3C6Q969F1 213 aa11.65□□□□□ -0.54
RAD51B-208ENST00000479335 NACAP1Q9BZK3 213 aa11.65□□□□□ -0.54
RAD51B-208ENST00000479335 APPP05067 770 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 ZSCAN22P10073 491 aaPredicted RBP11.64□□□□□ -0.55
RAD51B-208ENST00000479335 CYP7A1P22680 504 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 ATP2B4P23634 1241 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 DDR1Q08345 913 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 COL9A3Q14050 684 aaPredicted RBP11.64□□□□□ -0.55
RAD51B-208ENST00000479335 SPTY2D1Q68D10 685 aaPredicted RBP11.64□□□□□ -0.55
RAD51B-208ENST00000479335 RALYLQ86SE5 291 aaKnown RBP11.64□□□□□ -0.55
RAD51B-208ENST00000479335 MB21D2Q8IYB1 491 aaPredicted RBP11.64□□□□□ -0.55
RAD51B-208ENST00000479335 IFNL3Q8IZI9 196 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 BRF1Q92994 677 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 TCEANC2Q96MN5 208 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 BRIP1Q9BX63 1249 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 GSG1L2A8MUP6 293 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 MBD4O95243 580 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 ZNF827Q17R98 1081 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 MCTP1Q6DN14 999 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 GIMAP6Q6P9H5 292 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 COL23A1Q86Y22 540 aaPredicted RBP11.64□□□□□ -0.55
RAD51B-208ENST00000479335 NECAB1Q8N987 351 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 MTA3Q9BTC8 594 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 NAPBQ9H115 298 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 PODXL2Q9NZ53 605 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 RAI14Q9P0K7 980 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 ANKIB1Q9P2G1 1089 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 ABCF2Q9UG63 623 aa11.64□□□□□ -0.55
RAD51B-208ENST00000479335 SALL1Q9NSC2 1324 aa11.63□□□□□ -0.55
RAD51B-208ENST00000479335 NRXN2Q9P2S2 1712 aa11.63□□□□□ -0.55
RAD51B-208ENST00000479335 A0A0G2JLW4 131 aa11.63□□□□□ -0.55
RAD51B-208ENST00000479335 WTIPA6NIX2 430 aaPredicted RBP11.63□□□□□ -0.55
RAD51B-208ENST00000479335 KLHL40Q2TBA0 621 aa11.63□□□□□ -0.55
RAD51B-208ENST00000479335 ZNF804AQ7Z570 1209 aa11.63□□□□□ -0.55
RAD51B-208ENST00000479335 TDRD7Q8NHU6 1098 aaKnown RBP11.63□□□□□ -0.55
RAD51B-208ENST00000479335 WDR66Q8TBY9 1149 aa11.63□□□□□ -0.55
RAD51B-208ENST00000479335 CNNM2Q9H8M5 875 aa11.63□□□□□ -0.55
RAD51B-208ENST00000479335 ARMT1Q9H993 441 aa11.63□□□□□ -0.55
RAD51B-208ENST00000479335 LMBRD1Q9NUN5 540 aa11.63□□□□□ -0.55
RAD51B-208ENST00000479335 IQSEC3Q9UPP2 1182 aaPredicted RBP11.63□□□□□ -0.55
RAD51B-208ENST00000479335 KIF3AQ9Y496 699 aa11.63□□□□□ -0.55
RAD51B-208ENST00000479335 MAGEB6P1A0A0J9YX57 407 aa11.62□□□□□ -0.55
RAD51B-208ENST00000479335 HAND2P61296 217 aa11.62□□□□□ -0.55
RAD51B-208ENST00000479335 HMGN5P82970 282 aaKnown RBP11.62□□□□□ -0.55
RAD51B-208ENST00000479335 C1QBPQ07021 282 aaKnown RBP11.62□□□□□ -0.55
RAD51B-208ENST00000479335 LARP1BQ659C4 914 aaKnown RBP11.62□□□□□ -0.55
RAD51B-208ENST00000479335 NAA16Q6N069 864 aaPredicted RBP11.62□□□□□ -0.55
RAD51B-208ENST00000479335 SMARCC2Q8TAQ2 1214 aa11.62□□□□□ -0.55
RAD51B-208ENST00000479335 TMEM87BQ96K49 555 aa11.62□□□□□ -0.55
RAD51B-208ENST00000479335 SLC4A4Q9Y6R1 1079 aa11.62□□□□□ -0.55
RAD51B-208ENST00000479335 MYH13Q9UKX3 1938 aa11.62□□□□□ -0.55
RAD51B-208ENST00000479335 COL1A1P02452 1464 aaPredicted RBP11.62□□□□□ -0.55
RAD51B-208ENST00000479335 TNS1Q9HBL0 1735 aaKnown RBP11.62□□□□□ -0.55
RAD51B-208ENST00000479335 CACNA1SQ13698 1873 aa11.62□□□□□ -0.55
RAD51B-208ENST00000479335 PRC1O43663 620 aa11.61□□□□□ -0.55
RAD51B-208ENST00000479335 DHX16O60231 1041 aaKnown RBP11.61□□□□□ -0.55
RAD51B-208ENST00000479335 F13A1P00488 732 aa11.61□□□□□ -0.55
RAD51B-208ENST00000479335 PDIA3P30101 505 aaKnown RBP11.61□□□□□ -0.55
RAD51B-208ENST00000479335 SAMD1Q6SPF0 538 aaPredicted RBP11.61□□□□□ -0.55
RAD51B-208ENST00000479335 SP8Q8IXZ3 490 aa11.61□□□□□ -0.55
RAD51B-208ENST00000479335 LCORLQ8N3X6 602 aa11.61□□□□□ -0.55
RAD51B-208ENST00000479335 RGS22Q8NE09 1264 aa11.61□□□□□ -0.55
RAD51B-208ENST00000479335 NSUN4Q96CB9 384 aaKnown RBP11.61□□□□□ -0.55
RAD51B-208ENST00000479335 RIOK1Q9BRS2 568 aaKnown RBP11.61□□□□□ -0.55
RAD51B-208ENST00000479335 KRT23Q9C075 422 aa11.61□□□□□ -0.55
RAD51B-208ENST00000479335 NBPF3Q9H094 633 aa11.61□□□□□ -0.55
RAD51B-208ENST00000479335 RNF41Q9H4P4 317 aaPredicted RBP11.61□□□□□ -0.55
RAD51B-208ENST00000479335 EPB41L4AQ9HCS5 686 aaPredicted RBP11.61□□□□□ -0.55
RAD51B-208ENST00000479335 RGS17Q9UGC6 210 aaPredicted RBP11.61□□□□□ -0.55
RAD51B-208ENST00000479335 ANAPC4Q9UJX5 808 aa11.61□□□□□ -0.55
RAD51B-208ENST00000479335 ISY1Q9ULR0 285 aaKnown RBP11.61□□□□□ -0.55
RAD51B-208ENST00000479335 MTMR6Q9Y217 621 aa11.61□□□□□ -0.55
RAD51B-208ENST00000479335 PCP11498 1178 aaKnown RBP11.6□□□□□ -0.55
RAD51B-208ENST00000479335 NPR1P16066 1061 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 KLRK1P26718 216 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 ALDH1B1P30837 517 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 PDE6BP35913 854 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 APOBRQ0VD83 1088 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 SCRN1Q12765 414 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 AKNAD1Q5T1N1 836 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 LRRC2Q9BYS8 371 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 GGA1Q9UJY5 639 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 PARP3Q9Y6F1 533 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 DDX49Q9Y6V7 483 aaKnown RBP11.6□□□□□ -0.55
RAD51B-208ENST00000479335 CCDC88AQ3V6T2 1871 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 MBD3O95983 291 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 TDO2P48775 406 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 ANTXR2P58335 489 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 GPSM2P81274 684 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 STK3Q13188 491 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 CSPP1Q1MSJ5 1256 aa11.6□□□□□ -0.55
RAD51B-208ENST00000479335 TXNRD3Q86VQ6 643 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms