RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 TSR2Q969E8 191 aaKnown RBP8.46□□□□□ -1.06
VCP-205ENST00000479300 OPTNQ96CV9 577 aa8.46□□□□□ -1.06
VCP-205ENST00000479300 ARHGAP39Q9C0H5 1083 aa8.46□□□□□ -1.06
VCP-205ENST00000479300 ELP3Q9H9T3 547 aa8.46□□□□□ -1.06
VCP-205ENST00000479300 VEZTQ9HBM0 779 aa8.46□□□□□ -1.06
VCP-205ENST00000479300 PPP2R3BQ9Y5P8 575 aa8.46□□□□□ -1.06
VCP-205ENST00000479300 ARAP2Q8WZ64 1704 aa8.46□□□□□ -1.06
VCP-205ENST00000479300 UNCXA6NJT0 531 aa8.45□□□□□ -1.06
VCP-205ENST00000479300 MYCP01106 439 aaPredicted RBP8.45□□□□□ -1.06
VCP-205ENST00000479300 IGHMBP2P38935 993 aaKnown RBP8.45□□□□□ -1.06
VCP-205ENST00000479300 GRIK5Q16478 980 aa8.45□□□□□ -1.06
VCP-205ENST00000479300 ANKRD13AQ8IZ07 590 aa8.45□□□□□ -1.06
VCP-205ENST00000479300 SH3TC2Q8TF17 1288 aa8.45□□□□□ -1.06
VCP-205ENST00000479300 SPOCK2Q92563 424 aa8.45□□□□□ -1.06
VCP-205ENST00000479300 SHISA4Q96DD7 197 aa8.45□□□□□ -1.06
VCP-205ENST00000479300 ANKRD2Q9GZV1 360 aa8.45□□□□□ -1.06
VCP-205ENST00000479300 SALL2Q9Y467 1007 aaPredicted RBP8.45□□□□□ -1.06
VCP-205ENST00000479300 IL16Q14005 1332 aa8.45□□□□□ -1.06
VCP-205ENST00000479300 CTGFP29279 349 aa8.44□□□□□ -1.06
VCP-205ENST00000479300 IREB2P48200 963 aaKnown RBP8.44□□□□□ -1.06
VCP-205ENST00000479300 FOXO4P98177 505 aa8.44□□□□□ -1.06
VCP-205ENST00000479300 VGLL4Q14135 290 aa8.44□□□□□ -1.06
VCP-205ENST00000479300 TWISTNBQ3B726 338 aaPredicted RBP8.44□□□□□ -1.06
VCP-205ENST00000479300 SUPT20HL1Q3ZLR7 823 aa8.44□□□□□ -1.06
VCP-205ENST00000479300 EPHA10Q5JZY3 1008 aa8.44□□□□□ -1.06
VCP-205ENST00000479300 WWC1Q8IX03 1113 aa8.44□□□□□ -1.06
VCP-205ENST00000479300 FAM9BQ8IZU0 186 aa8.44□□□□□ -1.06
VCP-205ENST00000479300 ZNF70Q9UC06 446 aaPredicted RBP8.44□□□□□ -1.06
VCP-205ENST00000479300 CCL15-CCL14A0A0B4J2E2 113 aa8.43□□□□□ -1.06
VCP-205ENST00000479300 KCNJ4P48050 445 aa8.43□□□□□ -1.06
VCP-205ENST00000479300 FKBP1AP62942 108 aaKnown RBP8.43□□□□□ -1.06
VCP-205ENST00000479300 MTFR1Q15390 333 aa8.43□□□□□ -1.06
VCP-205ENST00000479300 TAF1CQ15572 869 aaPredicted RBP8.43□□□□□ -1.06
VCP-205ENST00000479300 CCL15Q16663 113 aa8.43□□□□□ -1.06
VCP-205ENST00000479300 SLC9C1Q4G0N8 1177 aa8.43□□□□□ -1.06
VCP-205ENST00000479300 CCDC184Q52MB2 194 aa8.43□□□□□ -1.06
VCP-205ENST00000479300 WDR63Q8IWG1 891 aa8.43□□□□□ -1.06
VCP-205ENST00000479300 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.43□□□□□ -1.06
VCP-205ENST00000479300 ZNF594Q96JF6 807 aaPredicted RBP8.43□□□□□ -1.06
VCP-205ENST00000479300 MPHOSPH8Q99549 860 aa8.43□□□□□ -1.06
VCP-205ENST00000479300 TMEM106CQ9BVX2 250 aa8.43□□□□□ -1.06
VCP-205ENST00000479300 TMEM39BQ9GZU3 492 aa8.43□□□□□ -1.06
VCP-205ENST00000479300 PRO3102Q9H379 93 aa8.43□□□□□ -1.06
VCP-205ENST00000479300 MYH16Q9H6N6 1097 aa8.43□□□□□ -1.06
VCP-205ENST00000479300 TDRD3Q9H7E2 651 aaKnown RBP8.43□□□□□ -1.06
VCP-205ENST00000479300 FAM205AQ6ZU69 1335 aa8.43□□□□□ -1.06
VCP-205ENST00000479300 COL6A3P12111 3177 aa8.43□□□□□ -1.06
VCP-205ENST00000479300 A0A0C4DFX4 3053 aa8.42□□□□□ -1.06
VCP-205ENST00000479300 OTUD7BQ6GQQ9 843 aa8.42□□□□□ -1.06
VCP-205ENST00000479300 CHRDL2Q6WN34 429 aa8.42□□□□□ -1.06
VCP-205ENST00000479300 UBE2Q1Q7Z7E8 422 aa8.42□□□□□ -1.06
VCP-205ENST00000479300 RBM27Q9P2N5 1060 aaKnown RBP8.42□□□□□ -1.06
VCP-205ENST00000479300 SNCAIPQ9Y6H5 919 aa8.42□□□□□ -1.06
VCP-205ENST00000479300 CACNA1FO60840 1977 aa8.42□□□□□ -1.06
VCP-205ENST00000479300 LAMA3Q16787 3333 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 CUL9Q8IWT3 2517 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 ADGRA2Q96PE1 1338 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 FANCIQ9NVI1 1328 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 ANKRD18BA2A2Z9 1011 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 SPDYE5A6NIY4 337 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 TCP10L2B9ZVM9 353 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 BTBD19C9JJ37 291 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 MYO1BO43795 1136 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 GYG1P46976 350 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 RBM5P52756 815 aaKnown RBP eCLIP8.41□□□□□ -1.06
VCP-205ENST00000479300 CACNB3P54284 484 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 MAP3K9P80192 1104 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 LACTBP83111 547 aaPredicted RBP8.41□□□□□ -1.06
VCP-205ENST00000479300 FLIIQ13045 1269 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 FKBP5Q13451 457 aaPredicted RBP8.41□□□□□ -1.06
VCP-205ENST00000479300 SLC4A8Q2Y0W8 1093 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 ZNF804AQ7Z570 1209 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 DZIP1LQ8IYY4 767 aaKnown RBP8.41□□□□□ -1.06
VCP-205ENST00000479300 LINS1Q8NG48 757 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 TDRD7Q8NHU6 1098 aaKnown RBP8.41□□□□□ -1.06
VCP-205ENST00000479300 DNAAF4Q8WXU2 420 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 ZFYVE28Q9HCC9 887 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 SERPINA10Q9UK55 444 aa8.41□□□□□ -1.06
VCP-205ENST00000479300 PLIN1O60240 522 aa8.4□□□□□ -1.06
VCP-205ENST00000479300 TLR2O60603 784 aa8.4□□□□□ -1.06
VCP-205ENST00000479300 ECM2O94769 699 aaPredicted RBP8.4□□□□□ -1.06
VCP-205ENST00000479300 GTF2A2P52657 109 aa8.4□□□□□ -1.06
VCP-205ENST00000479300 MFSD14BQ5SR56 506 aa8.4□□□□□ -1.06
VCP-205ENST00000479300 ERICH6BQ5W0A0 696 aa8.4□□□□□ -1.06
VCP-205ENST00000479300 LMBR1LQ6UX01 489 aa8.4□□□□□ -1.06
VCP-205ENST00000479300 NBPF11Q86T75 865 aa8.4□□□□□ -1.06
VCP-205ENST00000479300 FAM84BQ96KN1 310 aaPredicted RBP8.4□□□□□ -1.06
VCP-205ENST00000479300 TRIM47Q96LD4 638 aa8.4□□□□□ -1.06
VCP-205ENST00000479300 PUS3Q9BZE2 481 aaKnown RBP8.4□□□□□ -1.06
VCP-205ENST00000479300 TTF2Q9UNY4 1162 aaKnown RBP8.4□□□□□ -1.06
VCP-205ENST00000479300 RBM19Q9Y4C8 960 aaKnown RBP8.4□□□□□ -1.06
VCP-205ENST00000479300 F6X3S4 739 aa8.39□□□□□ -1.07
VCP-205ENST00000479300 SOX1O00570 391 aaPredicted RBP8.39□□□□□ -1.07
VCP-205ENST00000479300 IRF6O14896 467 aa8.39□□□□□ -1.07
VCP-205ENST00000479300 CRKP46108 304 aa8.39□□□□□ -1.07
VCP-205ENST00000479300 EXOSC9Q06265 439 aaKnown RBP8.39□□□□□ -1.07
VCP-205ENST00000479300 IFIT5Q13325 482 aaKnown RBP8.39□□□□□ -1.07
VCP-205ENST00000479300 MOGSQ13724 837 aa8.39□□□□□ -1.07
VCP-205ENST00000479300 BEND3Q5T5X7 828 aa8.39□□□□□ -1.07
VCP-205ENST00000479300 C17orf99Q6UX52 265 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms