RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 VPS37DQ86XT2 251 aa9.18□□□□□ -0.94
CDK13-204ENST00000478563 RNF112Q9ULX5 631 aa9.18□□□□□ -0.94
CDK13-204ENST00000478563 TRIM33Q9UPN9 1127 aa9.18□□□□□ -0.94
CDK13-204ENST00000478563 GIPC1O14908 333 aa9.17□□□□□ -0.94
CDK13-204ENST00000478563 GHRHP01286 108 aa9.17□□□□□ -0.94
CDK13-204ENST00000478563 NOS3P29474 1203 aa9.17□□□□□ -0.94
CDK13-204ENST00000478563 TXKP42681 527 aa9.17□□□□□ -0.94
CDK13-204ENST00000478563 RBL2Q08999 1139 aa9.17□□□□□ -0.94
CDK13-204ENST00000478563 SETDB1Q15047 1291 aa9.17□□□□□ -0.94
CDK13-204ENST00000478563 TAF1CQ15572 869 aaPredicted RBP9.17□□□□□ -0.94
CDK13-204ENST00000478563 WFDC12Q8WWY7 111 aa9.17□□□□□ -0.94
CDK13-204ENST00000478563 FMNL2Q96PY5 1086 aa9.17□□□□□ -0.94
CDK13-204ENST00000478563 PIF1Q9H611 641 aa9.17□□□□□ -0.94
CDK13-204ENST00000478563 USP21Q9UK80 565 aa9.17□□□□□ -0.94
CDK13-204ENST00000478563 TM4SF5O14894 197 aa9.16□□□□□ -0.94
CDK13-204ENST00000478563 CYP2E1P05181 493 aaPredicted RBP9.16□□□□□ -0.94
CDK13-204ENST00000478563 YBX3P16989 372 aaKnown RBP eCLIP9.16□□□□□ -0.94
CDK13-204ENST00000478563 GDF6Q6KF10 455 aaPredicted RBP9.16□□□□□ -0.94
CDK13-204ENST00000478563 MCF2L2Q86YR7 1114 aa9.16□□□□□ -0.94
CDK13-204ENST00000478563 IL22RA1Q8N6P7 574 aa9.16□□□□□ -0.94
CDK13-204ENST00000478563 SNX29Q8TEQ0 813 aa9.16□□□□□ -0.94
CDK13-204ENST00000478563 HIRIP3Q9BW71 556 aaPredicted RBP9.16□□□□□ -0.94
CDK13-204ENST00000478563 ZSWIM4Q9H7M6 989 aa9.16□□□□□ -0.94
CDK13-204ENST00000478563 FNDC3AQ9Y2H6 1198 aaKnown RBP9.16□□□□□ -0.94
CDK13-204ENST00000478563 USP17L7P0C7H9 530 aa9.15□□□□□ -0.94
CDK13-204ENST00000478563 ATP11AP98196 1134 aa9.15□□□□□ -0.94
CDK13-204ENST00000478563 ZNF662Q6ZS27 426 aa9.15□□□□□ -0.94
CDK13-204ENST00000478563 ZNF438Q7Z4V0 828 aa9.15□□□□□ -0.94
CDK13-204ENST00000478563 ZFYVE28Q9HCC9 887 aa9.15□□□□□ -0.94
CDK13-204ENST00000478563 ABI2Q9NYB9 513 aaPredicted RBP9.15□□□□□ -0.94
CDK13-204ENST00000478563 TMEM63CQ9P1W3 806 aa9.15□□□□□ -0.94
CDK13-204ENST00000478563 FAM8A1Q9UBU6 413 aa9.15□□□□□ -0.94
CDK13-204ENST00000478563 TLDC2A0PJX2 215 aa9.14□□□□□ -0.95
CDK13-204ENST00000478563 STK10O94804 968 aaKnown RBP9.14□□□□□ -0.95
CDK13-204ENST00000478563 FGRP09769 529 aa9.14□□□□□ -0.95
CDK13-204ENST00000478563 IREB2P48200 963 aaKnown RBP9.14□□□□□ -0.95
CDK13-204ENST00000478563 PAK2Q13177 524 aa9.14□□□□□ -0.95
CDK13-204ENST00000478563 MEGF10Q96KG7 1140 aa9.14□□□□□ -0.95
CDK13-204ENST00000478563 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.14□□□□□ -0.959e-7■□□□□ 10.2
CDK13-204ENST00000478563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.14□□□□□ -0.95
CDK13-204ENST00000478563 PHACTR2O75167 634 aa9.13□□□□□ -0.95
CDK13-204ENST00000478563 POLR3DP05423 398 aaPredicted RBP9.13□□□□□ -0.95
CDK13-204ENST00000478563 GJA8P48165 433 aa9.13□□□□□ -0.95
CDK13-204ENST00000478563 HYAL2Q12891 473 aa9.13□□□□□ -0.95
CDK13-204ENST00000478563 SOGA3Q5TF21 947 aa9.13□□□□□ -0.95
CDK13-204ENST00000478563 PDE12Q6L8Q7 609 aaKnown RBP9.13□□□□□ -0.95
CDK13-204ENST00000478563 NXPE4Q6UWF7 544 aa9.13□□□□□ -0.95
CDK13-204ENST00000478563 XKR5Q6UX68 686 aa9.13□□□□□ -0.95
CDK13-204ENST00000478563 ANKRD13AQ8IZ07 590 aa9.13□□□□□ -0.95
CDK13-204ENST00000478563 CEP120Q8N960 986 aa9.13□□□□□ -0.95
CDK13-204ENST00000478563 RBSNQ9H1K0 784 aa9.13□□□□□ -0.95
CDK13-204ENST00000478563 ELP3Q9H9T3 547 aa9.13□□□□□ -0.95
CDK13-204ENST00000478563 NPHS2Q9NP85 383 aa9.13□□□□□ -0.95
CDK13-204ENST00000478563 COPRSQ9NQ92 184 aa9.13□□□□□ -0.95
CDK13-204ENST00000478563 CNTN3Q9P232 1028 aa9.13□□□□□ -0.95
CDK13-204ENST00000478563 GADD45BO75293 160 aaPredicted RBP9.12□□□□□ -0.95
CDK13-204ENST00000478563 ATF4P18848 351 aaPredicted RBP9.12□□□□□ -0.95
CDK13-204ENST00000478563 ST13P50502 369 aaKnown RBP9.12□□□□□ -0.95
CDK13-204ENST00000478563 TTC39BQ5VTQ0 682 aaPredicted RBP9.12□□□□□ -0.95
CDK13-204ENST00000478563 ERMP1Q7Z2K6 904 aa9.12□□□□□ -0.95
CDK13-204ENST00000478563 CACTIN-AS1Q8N1I8 211 aa9.12□□□□□ -0.95
CDK13-204ENST00000478563 GPRASP2Q96D09 838 aa9.12□□□□□ -0.95
CDK13-204ENST00000478563 RASSF4Q9H2L5 321 aa9.12□□□□□ -0.95
CDK13-204ENST00000478563 DZIP1LQ8IYY4 767 aaKnown RBP9.11□□□□□ -0.95
CDK13-204ENST00000478563 TMEM130Q8N3G9 435 aa9.11□□□□□ -0.95
CDK13-204ENST00000478563 GALNT11Q8NCW6 608 aa9.11□□□□□ -0.95
CDK13-204ENST00000478563 BCO2Q9BYV7 579 aa9.11□□□□□ -0.95
CDK13-204ENST00000478563 OSBPL2Q9H1P3 480 aa9.11□□□□□ -0.95
CDK13-204ENST00000478563 F8W735 103 aaPredicted RBP9.1□□□□□ -0.95
CDK13-204ENST00000478563 BMS1Q14692 1282 aaKnown RBP9.1□□□□□ -0.95
CDK13-204ENST00000478563 SDE2Q6IQ49 451 aa9.1□□□□□ -0.95
CDK13-204ENST00000478563 Q6ZS46 218 aa9.1□□□□□ -0.95
CDK13-204ENST00000478563 PCMTD2Q9NV79 361 aa9.1□□□□□ -0.95
CDK13-204ENST00000478563 SALL4Q9UJQ4 1053 aa9.1□□□□□ -0.95
CDK13-204ENST00000478563 ALX3O95076 343 aa9.09□□□□□ -0.95
CDK13-204ENST00000478563 CEP135Q66GS9 1140 aa9.09□□□□□ -0.95
CDK13-204ENST00000478563 MAP4K3Q8IVH8 894 aa9.09□□□□□ -0.95
CDK13-204ENST00000478563 PBX4Q9BYU1 374 aa9.09□□□□□ -0.95
CDK13-204ENST00000478563 SRCIN1Q9C0H9 1055 aa9.09□□□□□ -0.95
CDK13-204ENST00000478563 KBTBD4Q9NVX7 518 aa9.09□□□□□ -0.95
CDK13-204ENST00000478563 TBX22Q9Y458 520 aa9.09□□□□□ -0.95
CDK13-204ENST00000478563 PPME1Q9Y570 386 aa9.09□□□□□ -0.95
CDK13-204ENST00000478563 NFKBIEO00221 500 aa9.08□□□□□ -0.96
CDK13-204ENST00000478563 EREGO14944 169 aa9.08□□□□□ -0.96
CDK13-204ENST00000478563 C1orf127Q8N9H9 656 aa9.08□□□□□ -0.96
CDK13-204ENST00000478563 MRPL18Q9H0U6 180 aaKnown RBP9.08□□□□□ -0.96
CDK13-204ENST00000478563 MUC3BQ9H195 1237 aa9.08□□□□□ -0.96
CDK13-204ENST00000478563 CHRDQ9H2X0 955 aa9.08□□□□□ -0.96
CDK13-204ENST00000478563 AKTIPQ9H8T0 292 aa9.08□□□□□ -0.96
CDK13-204ENST00000478563 KANSL3Q9P2N6 904 aa9.08□□□□□ -0.96
CDK13-204ENST00000478563 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.08□□□□□ -0.96
CDK13-204ENST00000478563 LINC01387J3KSC0 135 aa9.07□□□□□ -0.96
CDK13-204ENST00000478563 ACPPP15309 386 aa9.07□□□□□ -0.96
CDK13-204ENST00000478563 GALNT12Q8IXK2 581 aa9.07□□□□□ -0.96
CDK13-204ENST00000478563 SPACA7Q96KW9 195 aa9.07□□□□□ -0.96
CDK13-204ENST00000478563 POP1Q99575 1024 aaKnown RBP9.07□□□□□ -0.96
CDK13-204ENST00000478563 KRTAP4-9Q9BYQ8 210 aa9.07□□□□□ -0.96
CDK13-204ENST00000478563 LACRTQ9GZZ8 138 aa9.07□□□□□ -0.96
CDK13-204ENST00000478563 TTF2Q9UNY4 1162 aaKnown RBP9.07□□□□□ -0.96
CDK13-204ENST00000478563 SMNDC1O75940 238 aaKnown RBP eCLIP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms