RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 USP5P45974 858 aa7.13□□□□□ -1.27
HPS3-205ENST00000478525 EHHADHQ08426 723 aa7.13□□□□□ -1.27
HPS3-205ENST00000478525 GATA6Q92908 595 aa7.13□□□□□ -1.27
HPS3-205ENST00000478525 FAM170BA6NMN3 283 aa7.12□□□□□ -1.27
HPS3-205ENST00000478525 POLR3DP05423 398 aaPredicted RBP7.12□□□□□ -1.27
HPS3-205ENST00000478525 CTSBP07858 339 aa7.12□□□□□ -1.27
HPS3-205ENST00000478525 CBLL1Q75N03 491 aa7.12□□□□□ -1.27
HPS3-205ENST00000478525 GJD3Q8N144 294 aa7.12□□□□□ -1.27
HPS3-205ENST00000478525 YIPF2Q9BWQ6 316 aa7.12□□□□□ -1.27
HPS3-205ENST00000478525 ZFYVE28Q9HCC9 887 aa7.12□□□□□ -1.27
HPS3-205ENST00000478525 ACTL7BQ9Y614 415 aa7.12□□□□□ -1.27
HPS3-205ENST00000478525 CYP26A1O43174 497 aa7.11□□□□□ -1.27
HPS3-205ENST00000478525 FAM13AO94988 1023 aa7.11□□□□□ -1.27
HPS3-205ENST00000478525 PCDH1Q08174 1060 aa7.11□□□□□ -1.27
HPS3-205ENST00000478525 COL19A1Q14993 1142 aa7.11□□□□□ -1.27
HPS3-205ENST00000478525 FBXL18Q96ME1 805 aa7.11□□□□□ -1.27
HPS3-205ENST00000478525 CCDC87Q9NVE4 849 aa7.11□□□□□ -1.27
HPS3-205ENST00000478525 A0A096LPE4 126 aa7.1□□□□□ -1.27
HPS3-205ENST00000478525 A0A1W2PPZ6 126 aa7.1□□□□□ -1.27
HPS3-205ENST00000478525 ARID3CA6NKF2 412 aa7.1□□□□□ -1.27
HPS3-205ENST00000478525 RAB6AP20340 208 aa7.1□□□□□ -1.27
HPS3-205ENST00000478525 MAOBP27338 520 aa7.1□□□□□ -1.27
HPS3-205ENST00000478525 ZNF423Q2M1K9 1284 aa7.1□□□□□ -1.27
HPS3-205ENST00000478525 CCNJLQ8IV13 435 aa7.1□□□□□ -1.27
HPS3-205ENST00000478525 TP53INP2Q8IXH6 220 aa7.1□□□□□ -1.27
HPS3-205ENST00000478525 CLEC4MQ9H2X3 399 aaPredicted RBP7.1□□□□□ -1.27
HPS3-205ENST00000478525 BSDC1Q9NW68 430 aaPredicted RBP7.1□□□□□ -1.27
HPS3-205ENST00000478525 GRIA4P48058 902 aa7.09□□□□□ -1.27
HPS3-205ENST00000478525 ZNF211Q13398 564 aaPredicted RBP7.09□□□□□ -1.27
HPS3-205ENST00000478525 SPRED3Q2MJR0 410 aa7.09□□□□□ -1.27
HPS3-205ENST00000478525 PHLDB3Q6NSJ2 640 aa7.09□□□□□ -1.27
HPS3-205ENST00000478525 TCF12Q99081 682 aa7.09□□□□□ -1.27
HPS3-205ENST00000478525 A0A1W2PP55 124 aa7.08□□□□□ -1.28
HPS3-205ENST00000478525 EIF4EBP3O60516 100 aaPredicted RBP7.08□□□□□ -1.28
HPS3-205ENST00000478525 NFICP08651 508 aa7.08□□□□□ -1.28
HPS3-205ENST00000478525 SF3B2Q13435 895 aaKnown RBP7.08□□□□□ -1.28
HPS3-205ENST00000478525 POU4F3Q15319 338 aa7.08□□□□□ -1.28
HPS3-205ENST00000478525 AKAP4Q5JQC9 854 aa7.08□□□□□ -1.28
HPS3-205ENST00000478525 OGFOD2Q6N063 350 aa7.08□□□□□ -1.28
HPS3-205ENST00000478525 FLCNQ8NFG4 579 aa7.08□□□□□ -1.28
HPS3-205ENST00000478525 TRIM56Q9BRZ2 755 aaKnown RBP7.08□□□□□ -1.28
HPS3-205ENST00000478525 SEMA6CQ9H3T2 930 aa7.08□□□□□ -1.28
HPS3-205ENST00000478525 LIN7BQ9HAP6 207 aa7.08□□□□□ -1.28
HPS3-205ENST00000478525 ANO2Q9NQ90 1003 aa7.08□□□□□ -1.28
HPS3-205ENST00000478525 FAM105AQ9NUU6 356 aa7.08□□□□□ -1.28
HPS3-205ENST00000478525 ECEL1O95672 775 aa7.07□□□□□ -1.28
HPS3-205ENST00000478525 ITGB5P18084 799 aa7.07□□□□□ -1.28
HPS3-205ENST00000478525 FKBP4Q02790 459 aaKnown RBP eCLIP7.07□□□□□ -1.28
HPS3-205ENST00000478525 FZD5Q13467 585 aa7.07□□□□□ -1.28
HPS3-205ENST00000478525 MAP7Q14244 749 aa7.07□□□□□ -1.28
HPS3-205ENST00000478525 ZNF765Q7L2R6 523 aa7.07□□□□□ -1.28
HPS3-205ENST00000478525 GALNT12Q8IXK2 581 aa7.07□□□□□ -1.28
HPS3-205ENST00000478525 ACSS3Q9H6R3 686 aa7.07□□□□□ -1.28
HPS3-205ENST00000478525 LRRC4CQ9HCJ2 640 aa7.07□□□□□ -1.28
HPS3-205ENST00000478525 PAK6Q9NQU5 681 aaPredicted RBP7.07□□□□□ -1.28
HPS3-205ENST00000478525 ZC3H7BQ9UGR2 993 aaKnown RBP7.07□□□□□ -1.28
HPS3-205ENST00000478525 AP4E1Q9UPM8 1137 aa7.07□□□□□ -1.28
HPS3-205ENST00000478525 ABL1P00519 1130 aa7.06□□□□□ -1.28
HPS3-205ENST00000478525 CYP11A1P05108 521 aa7.06□□□□□ -1.28
HPS3-205ENST00000478525 DYMQ7RTS9 669 aa7.06□□□□□ -1.28
HPS3-205ENST00000478525 MTMR7Q9Y216 660 aa7.06□□□□□ -1.28
HPS3-205ENST00000478525 ARID1BQ8NFD5 2236 aaPredicted RBP7.05□□□□□ -1.28
HPS3-205ENST00000478525 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.05□□□□□ -1.28
HPS3-205ENST00000478525 CARNS1A5YM72 827 aa7.05□□□□□ -1.28
HPS3-205ENST00000478525 HP1BP3Q5SSJ5 553 aaPredicted RBP7.05□□□□□ -1.28
HPS3-205ENST00000478525 DUSP27Q5VZP5 1158 aa7.05□□□□□ -1.28
HPS3-205ENST00000478525 DYNC1LI2O43237 492 aaPredicted RBP7.04□□□□□ -1.28
HPS3-205ENST00000478525 B3GALT4O96024 378 aa7.04□□□□□ -1.28
HPS3-205ENST00000478525 JAG1P78504 1218 aa7.04□□□□□ -1.28
HPS3-205ENST00000478525 USPL1Q5W0Q7 1092 aa7.04□□□□□ -1.28
HPS3-205ENST00000478525 SEZ6L2Q6UXD5 910 aa7.04□□□□□ -1.28
HPS3-205ENST00000478525 CCDC82Q8N4S0 544 aa7.04□□□□□ -1.28
HPS3-205ENST00000478525 AGBL5Q8NDL9 886 aa7.04□□□□□ -1.28
HPS3-205ENST00000478525 ASIC4Q96FT7 647 aa7.04□□□□□ -1.28
HPS3-205ENST00000478525 CORO1BQ9BR76 489 aa7.04□□□□□ -1.28
HPS3-205ENST00000478525 GSX1Q9H4S2 264 aaPredicted RBP7.04□□□□□ -1.28
HPS3-205ENST00000478525 ZNF576Q9H609 170 aa7.04□□□□□ -1.28
HPS3-205ENST00000478525 C1GALT1Q9NS00 363 aa7.04□□□□□ -1.28
HPS3-205ENST00000478525 RAD18Q9NS91 495 aa7.04□□□□□ -1.28
HPS3-205ENST00000478525 JUNBP17275 347 aaPredicted RBP7.03□□□□□ -1.28
HPS3-205ENST00000478525 ASPAP45381 313 aa7.03□□□□□ -1.28
HPS3-205ENST00000478525 CYP27A1Q02318 531 aa7.03□□□□□ -1.28
HPS3-205ENST00000478525 WFDC3Q8IUB2 231 aa7.03□□□□□ -1.28
HPS3-205ENST00000478525 POU5F2Q8N7G0 328 aa7.03□□□□□ -1.28
HPS3-205ENST00000478525 DAGLAQ9Y4D2 1042 aa7.03□□□□□ -1.28
HPS3-205ENST00000478525 PPP1R15AO75807 674 aaPredicted RBP7.02□□□□□ -1.29
HPS3-205ENST00000478525 ZNF574Q6ZN55 896 aaPredicted RBP7.02□□□□□ -1.29
HPS3-205ENST00000478525 WDR18Q9BV38 432 aa7.02□□□□□ -1.29
HPS3-205ENST00000478525 AOC2O75106 756 aa7.01□□□□□ -1.29
HPS3-205ENST00000478525 C8AP07357 584 aa7.01□□□□□ -1.29
HPS3-205ENST00000478525 ITPKAP23677 461 aa7.01□□□□□ -1.29
HPS3-205ENST00000478525 PDE3AQ14432 1141 aa7.01□□□□□ -1.29
HPS3-205ENST00000478525 KIAA0319Q5VV43 1072 aa7.01□□□□□ -1.29
HPS3-205ENST00000478525 BCL7CQ8WUZ0 217 aaPredicted RBP7.01□□□□□ -1.29
HPS3-205ENST00000478525 ZFYVE1Q9HBF4 777 aa7.01□□□□□ -1.29
HPS3-205ENST00000478525 LGR6Q9HBX8 967 aa7.01□□□□□ -1.29
HPS3-205ENST00000478525 PAPLNO95428 1278 aa7□□□□□ -1.29
HPS3-205ENST00000478525 DDX54Q8TDD1 881 aaKnown RBP7□□□□□ -1.29
HPS3-205ENST00000478525 KRTAP4-9Q9BYQ8 210 aa7□□□□□ -1.29
HPS3-205ENST00000478525 NPHS2Q9NP85 383 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms