RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 CDC37L1Q7L3B6 337 aa12.05□□□□□ -0.48
NIFK-205ENST00000477693 SIRT2Q8IXJ6 389 aa12.05□□□□□ -0.48
NIFK-205ENST00000477693 MTMR14Q8NCE2 650 aa12.05□□□□□ -0.48
NIFK-205ENST00000477693 GCC1Q96CN9 775 aa12.05□□□□□ -0.48
NIFK-205ENST00000477693 ZBED3Q96IU2 234 aaPredicted RBP12.05□□□□□ -0.48
NIFK-205ENST00000477693 GNL3LQ9NVN8 582 aaKnown RBP12.05□□□□□ -0.48
NIFK-205ENST00000477693 GGA3Q9NZ52 723 aa12.05□□□□□ -0.48
NIFK-205ENST00000477693 SUGT1Q9Y2Z0 365 aa12.05□□□□□ -0.48
NIFK-205ENST00000477693 COL1A1P02452 1464 aaPredicted RBP12.04□□□□□ -0.48
NIFK-205ENST00000477693 TMEM88BA6NKF7 163 aa12.04□□□□□ -0.48
NIFK-205ENST00000477693 PHKA1P46020 1223 aa12.04□□□□□ -0.48
NIFK-205ENST00000477693 CHAF1AQ13111 956 aaPredicted RBP12.04□□□□□ -0.48
NIFK-205ENST00000477693 OS9Q13438 667 aaPredicted RBP12.04□□□□□ -0.48
NIFK-205ENST00000477693 NBPF9Q3BBW0 867 aa12.04□□□□□ -0.48
NIFK-205ENST00000477693 DCPSQ96C86 337 aaKnown RBP12.04□□□□□ -0.48
NIFK-205ENST00000477693 XAGE2Q96GT9 111 aa12.04□□□□□ -0.48
NIFK-205ENST00000477693 PCDHB15Q9Y5E8 787 aa12.04□□□□□ -0.48
NIFK-205ENST00000477693 PDS5AQ29RF7 1337 aaKnown RBP12.04□□□□□ -0.48
NIFK-205ENST00000477693 F8W031 263 aaPredicted RBP12.03□□□□□ -0.48
NIFK-205ENST00000477693 TRAF5O00463 557 aa12.03□□□□□ -0.48
NIFK-205ENST00000477693 HSP90AB4PQ58FF6 505 aa12.03□□□□□ -0.48
NIFK-205ENST00000477693 TNNI3KQ59H18 835 aa12.03□□□□□ -0.48
NIFK-205ENST00000477693 ANGEL2Q5VTE6 544 aaKnown RBP12.03□□□□□ -0.48
NIFK-205ENST00000477693 B4GALNT3Q6L9W6 998 aa12.03□□□□□ -0.48
NIFK-205ENST00000477693 KRT26Q7Z3Y9 468 aa12.03□□□□□ -0.48
NIFK-205ENST00000477693 ERC1Q8IUD2 1116 aa12.03□□□□□ -0.48
NIFK-205ENST00000477693 WDR66Q8TBY9 1149 aa12.03□□□□□ -0.48
NIFK-205ENST00000477693 GLIS2Q9BZE0 524 aaPredicted RBP12.03□□□□□ -0.48
NIFK-205ENST00000477693 SERPINA10Q9UK55 444 aa12.03□□□□□ -0.48
NIFK-205ENST00000477693 DENND2AQ9ULE3 1009 aa12.03□□□□□ -0.48
NIFK-205ENST00000477693 TTF2Q9UNY4 1162 aaKnown RBP12.03□□□□□ -0.48
NIFK-205ENST00000477693 FPGT-TNNI3KV9GXZ4 949 aa12.03□□□□□ -0.48
NIFK-205ENST00000477693 ASTN2O75129 1339 aaPredicted RBP12.03□□□□□ -0.48
NIFK-205ENST00000477693 SALL1Q9NSC2 1324 aa12.03□□□□□ -0.48
NIFK-205ENST00000477693 GABBR2O75899 941 aa12.02□□□□□ -0.49
NIFK-205ENST00000477693 HDLBPQ00341 1268 aaKnown RBP12.02□□□□□ -0.49
NIFK-205ENST00000477693 FMR1Q06787 632 aaKnown RBP eCLIP12.02□□□□□ -0.49
NIFK-205ENST00000477693 DLGAP5Q15398 846 aa12.02□□□□□ -0.49
NIFK-205ENST00000477693 GRIK5Q16478 980 aa12.02□□□□□ -0.49
NIFK-205ENST00000477693 CFAP100Q494V2 611 aa12.02□□□□□ -0.49
NIFK-205ENST00000477693 USP48Q86UV5 1035 aa12.02□□□□□ -0.49
NIFK-205ENST00000477693 SULF1Q8IWU6 871 aa12.02□□□□□ -0.49
NIFK-205ENST00000477693 NEUROD6Q96NK8 337 aa12.02□□□□□ -0.49
NIFK-205ENST00000477693 EXOC6BQ9Y2D4 811 aa12.02□□□□□ -0.49
NIFK-205ENST00000477693 ARID4AP29374 1257 aaPredicted RBP12.01□□□□□ -0.49
NIFK-205ENST00000477693 RASGRF1Q13972 1273 aa12.01□□□□□ -0.49
NIFK-205ENST00000477693 CST9Q5W186 159 aa12.01□□□□□ -0.49
NIFK-205ENST00000477693 MRIQ9BWK5 157 aa12.01□□□□□ -0.49
NIFK-205ENST00000477693 MAST3O60307 1309 aa12.01□□□□□ -0.49
NIFK-205ENST00000477693 MYH13Q9UKX3 1938 aa12.01□□□□□ -0.49
NIFK-205ENST00000477693 ADM5C9JUS6 153 aa12□□□□□ -0.49
NIFK-205ENST00000477693 MYO1BO43795 1136 aa12□□□□□ -0.49
NIFK-205ENST00000477693 CELF2O95319 508 aaKnown RBP12□□□□□ -0.49
NIFK-205ENST00000477693 GORABQ5T7V8 394 aa12□□□□□ -0.49
NIFK-205ENST00000477693 APOBEC3FQ8IUX4 373 aaKnown RBP12□□□□□ -0.49
NIFK-205ENST00000477693 SMC5Q8IY18 1101 aa12□□□□□ -0.49
NIFK-205ENST00000477693 ZGPATQ8N5A5 531 aaKnown RBP12□□□□□ -0.49
NIFK-205ENST00000477693 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
NIFK-205ENST00000477693 RHPN1Q8TCX5 695 aa12□□□□□ -0.49
NIFK-205ENST00000477693 KIF1BPQ96EK5 621 aa12□□□□□ -0.49
NIFK-205ENST00000477693 PRMT6Q96LA8 375 aaPredicted RBP12□□□□□ -0.49
NIFK-205ENST00000477693 DCTPP1Q9H773 170 aa12□□□□□ -0.49
NIFK-205ENST00000477693 PCDHAC2Q9Y5I4 1007 aa12□□□□□ -0.49
NIFK-205ENST00000477693 TRPM7Q96QT4 1865 aa12□□□□□ -0.49
NIFK-205ENST00000477693 RASSF10A6NK89 507 aa11.99□□□□□ -0.49
NIFK-205ENST00000477693 RAB11FIP3O75154 756 aa11.99□□□□□ -0.49
NIFK-205ENST00000477693 UQCRFS1P1P0C7P4 283 aa11.99□□□□□ -0.49
NIFK-205ENST00000477693 CRKP46108 304 aa11.99□□□□□ -0.49
NIFK-205ENST00000477693 RBM5P52756 815 aaKnown RBP eCLIP11.99□□□□□ -0.49
NIFK-205ENST00000477693 TEKT1Q969V4 418 aa11.99□□□□□ -0.49
NIFK-205ENST00000477693 EAF2Q96CJ1 260 aaPredicted RBP11.99□□□□□ -0.49
NIFK-205ENST00000477693 ZNF512BQ96KM6 892 aaPredicted RBP11.99□□□□□ -0.49
NIFK-205ENST00000477693 DBNDD2Q9BQY9 259 aa11.99□□□□□ -0.49
NIFK-205ENST00000477693 PCDH10Q9P2E7 1040 aa11.99□□□□□ -0.49
NIFK-205ENST00000477693 ZBTB47Q9UFB7 747 aaPredicted RBP11.99□□□□□ -0.49
NIFK-205ENST00000477693 DBNLQ9UJU6 430 aaKnown RBP11.99□□□□□ -0.49
NIFK-205ENST00000477693 CNTNAP1P78357 1384 aa11.99□□□□□ -0.49
NIFK-205ENST00000477693 ECM29Q5VYK3 1845 aa11.99□□□□□ -0.49
NIFK-205ENST00000477693 AOX1Q06278 1338 aa11.98□□□□□ -0.49
NIFK-205ENST00000477693 LDHBP07195 334 aaKnown RBP11.98□□□□□ -0.49
NIFK-205ENST00000477693 PRDX5P30044 214 aa11.98□□□□□ -0.49
NIFK-205ENST00000477693 MCAMP43121 646 aa11.98□□□□□ -0.49
NIFK-205ENST00000477693 CCDC158Q5M9N0 1113 aa11.98□□□□□ -0.49
NIFK-205ENST00000477693 HHIPL2Q6UWX4 724 aa11.98□□□□□ -0.49
NIFK-205ENST00000477693 DLK2Q6UY11 383 aa11.98□□□□□ -0.49
NIFK-205ENST00000477693 SPATA5Q8NB90 893 aa11.98□□□□□ -0.49
NIFK-205ENST00000477693 CDCA5Q96FF9 252 aa11.98□□□□□ -0.49
NIFK-205ENST00000477693 ZDHHC15Q96MV8 337 aa11.98□□□□□ -0.49
NIFK-205ENST00000477693 TLR7Q9NYK1 1049 aaKnown RBP11.98□□□□□ -0.49
NIFK-205ENST00000477693 HMG20BQ9P0W2 317 aa11.98□□□□□ -0.49
NIFK-205ENST00000477693 TLL2Q9Y6L7 1015 aa11.98□□□□□ -0.49
NIFK-205ENST00000477693 IGHDP01880 384 aa11.97□□□□□ -0.49
NIFK-205ENST00000477693 TTC39AQ5SRH9 613 aa11.97□□□□□ -0.49
NIFK-205ENST00000477693 APOBEC3HQ6NTF7 200 aaKnown RBP11.97□□□□□ -0.49
NIFK-205ENST00000477693 PI16Q6UXB8 463 aa11.97□□□□□ -0.49
NIFK-205ENST00000477693 SAPCD2Q86UD0 394 aa11.97□□□□□ -0.49
NIFK-205ENST00000477693 AACSQ86V21 672 aa11.97□□□□□ -0.49
NIFK-205ENST00000477693 CLASRPQ8N2M8 674 aaKnown RBP11.97□□□□□ -0.49
NIFK-205ENST00000477693 PLCD3Q8N3E9 789 aa11.97□□□□□ -0.49
NIFK-205ENST00000477693 HHIPL1Q96JK4 782 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms