RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 OCEL1Q9H607 264 aa9.41□□□□□ -0.9
VMA21-203ENST00000477649 SRP68Q9UHB9 627 aaKnown RBP9.41□□□□□ -0.9
VMA21-203ENST00000477649 LEMD3Q9Y2U8 911 aa9.41□□□□□ -0.9
VMA21-203ENST00000477649 M0R2C6 588 aa9.4□□□□□ -0.9
VMA21-203ENST00000477649 ZNF213O14771 459 aa9.4□□□□□ -0.9
VMA21-203ENST00000477649 IDH1O75874 414 aaKnown RBP9.4□□□□□ -0.9
VMA21-203ENST00000477649 TRDNQ13061 729 aa9.4□□□□□ -0.9
VMA21-203ENST00000477649 GRAPQ13588 217 aa9.4□□□□□ -0.9
VMA21-203ENST00000477649 RASGRF1Q13972 1273 aa9.4□□□□□ -0.9
VMA21-203ENST00000477649 NFIXQ14938 502 aa9.4□□□□□ -0.9
VMA21-203ENST00000477649 CCDC129Q6ZRS4 1044 aa9.4□□□□□ -0.9
VMA21-203ENST00000477649 C15orf52Q6ZUT6 534 aaKnown RBP9.4□□□□□ -0.9
VMA21-203ENST00000477649 FBXO33Q7Z6M2 555 aa9.4□□□□□ -0.9
VMA21-203ENST00000477649 VPS37DQ86XT2 251 aa9.4□□□□□ -0.9
VMA21-203ENST00000477649 CERS3Q8IU89 383 aa9.4□□□□□ -0.9
VMA21-203ENST00000477649 GRAPLQ8TC17 118 aaPredicted RBP9.4□□□□□ -0.9
VMA21-203ENST00000477649 AIDAQ96BJ3 306 aa9.4□□□□□ -0.9
VMA21-203ENST00000477649 SEC62Q99442 399 aaKnown RBP9.4□□□□□ -0.9
VMA21-203ENST00000477649 MTA3Q9BTC8 594 aa9.4□□□□□ -0.9
VMA21-203ENST00000477649 LRRC4BQ9NT99 713 aa9.4□□□□□ -0.9
VMA21-203ENST00000477649 NDUFB9Q9Y6M9 179 aa9.4□□□□□ -0.9
VMA21-203ENST00000477649 ZNF532Q9HCE3 1301 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 TCRBV5S4A2TA0A5A2 114 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 PATL2C9JE40 543 aaKnown RBP9.39□□□□□ -0.91
VMA21-203ENST00000477649 BBOX1O75936 387 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 TRIM37O94972 964 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 PCP11498 1178 aaKnown RBP9.39□□□□□ -0.91
VMA21-203ENST00000477649 GYS1P13807 737 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 RXRBP28702 533 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 TM4SF1P30408 202 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 KCNQ4P56696 695 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 EVCP57679 992 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 HMGN5P82970 282 aaKnown RBP9.39□□□□□ -0.91
VMA21-203ENST00000477649 FGD1P98174 961 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 EXOSC10Q01780 885 aaKnown RBP9.39□□□□□ -0.91
VMA21-203ENST00000477649 TXNRD1Q16881 649 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 CRY2Q49AN0 593 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 FAM182BQ5T319 152 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 SPTY2D1Q68D10 685 aaPredicted RBP9.39□□□□□ -0.91
VMA21-203ENST00000477649 RALYLQ86SE5 291 aaKnown RBP9.39□□□□□ -0.91
VMA21-203ENST00000477649 NLGN1Q8N2Q7 840 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 HELBQ8NG08 1087 aaPredicted RBP9.39□□□□□ -0.91
VMA21-203ENST00000477649 NCOA7Q8NI08 942 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 ZNF274Q96GC6 653 aaPredicted RBP9.39□□□□□ -0.91
VMA21-203ENST00000477649 RBM17Q96I25 401 aaKnown RBP9.39□□□□□ -0.91
VMA21-203ENST00000477649 PIH1D3Q9NQM4 214 aaKnown RBP9.39□□□□□ -0.91
VMA21-203ENST00000477649 LRP2BPQ9P2M1 347 aa9.39□□□□□ -0.91
VMA21-203ENST00000477649 E7EWF7 191 aa9.38□□□□□ -0.91
VMA21-203ENST00000477649 STX6O43752 255 aa9.38□□□□□ -0.91
VMA21-203ENST00000477649 DHX16O60231 1041 aaKnown RBP9.38□□□□□ -0.91
VMA21-203ENST00000477649 MBD3O95983 291 aa9.38□□□□□ -0.91
VMA21-203ENST00000477649 FGAP02671 866 aa9.38□□□□□ -0.91
VMA21-203ENST00000477649 HOXA10P31260 410 aaPredicted RBP9.38□□□□□ -0.91
VMA21-203ENST00000477649 HIBADHP31937 336 aaKnown RBP9.38□□□□□ -0.91
VMA21-203ENST00000477649 MCM5P33992 734 aa9.38□□□□□ -0.91
VMA21-203ENST00000477649 BCAMP50895 628 aa9.38□□□□□ -0.91
VMA21-203ENST00000477649 TOB2Q14106 344 aaPredicted RBP9.38□□□□□ -0.91
VMA21-203ENST00000477649 ME3Q16798 604 aa9.38□□□□□ -0.91
VMA21-203ENST00000477649 KLHL40Q2TBA0 621 aa9.38□□□□□ -0.91
VMA21-203ENST00000477649 GIMAP6Q6P9H5 292 aa9.38□□□□□ -0.91
VMA21-203ENST00000477649 IFNL1Q8IU54 200 aa9.38□□□□□ -0.91
VMA21-203ENST00000477649 RPGRQ92834 1020 aaKnown RBP9.38□□□□□ -0.91
VMA21-203ENST00000477649 CELF1Q92879 486 aaKnown RBP9.38□□□□□ -0.91
VMA21-203ENST00000477649 CRAMP1Q96RY5 1269 aa9.38□□□□□ -0.91
VMA21-203ENST00000477649 STRBPQ96SI9 672 aaKnown RBP9.38□□□□□ -0.91
VMA21-203ENST00000477649 PUS7LQ9H0K6 701 aaKnown RBP9.38□□□□□ -0.91
VMA21-203ENST00000477649 CNNM2Q9H8M5 875 aa9.38□□□□□ -0.91
VMA21-203ENST00000477649 TPCN1Q9ULQ1 816 aa9.38□□□□□ -0.91
VMA21-203ENST00000477649 EP400Q96L91 3159 aa9.38□□□□□ -0.91
VMA21-203ENST00000477649 XDHP47989 1333 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 SALL1Q9NSC2 1324 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 C4AP0C0L4 1744 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 AKAP11Q9UKA4 1901 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 KLRG2A4D1S0 409 aaPredicted RBP9.37□□□□□ -0.91
VMA21-203ENST00000477649 PFKFB2O60825 505 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 PHF14O94880 888 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 SERPINB2P05120 415 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 ZSCAN22P10073 491 aaPredicted RBP9.37□□□□□ -0.91
VMA21-203ENST00000477649 NCLP19338 710 aaKnown RBP9.37□□□□□ -0.91
VMA21-203ENST00000477649 ATP2B4P23634 1241 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 DEKP35659 375 aaKnown RBP9.37□□□□□ -0.91
VMA21-203ENST00000477649 L1TD1Q5T7N2 865 aaKnown RBP9.37□□□□□ -0.91
VMA21-203ENST00000477649 PRR5LQ6MZQ0 368 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 Q6ZUG5 572 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 C3orf67Q6ZVT6 689 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 NOL8Q76FK4 1167 aaKnown RBP9.37□□□□□ -0.91
VMA21-203ENST00000477649 CCDC83Q8IWF9 413 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 MAGEB6Q8N7X4 407 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 GTF3C6Q969F1 213 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 FAM84BQ96KN1 310 aaPredicted RBP9.37□□□□□ -0.91
VMA21-203ENST00000477649 RNF41Q9H4P4 317 aaPredicted RBP9.37□□□□□ -0.91
VMA21-203ENST00000477649 ZDHHC9Q9Y397 364 aa9.37□□□□□ -0.91
VMA21-203ENST00000477649 SYT1P21579 422 aa9.36□□□□□ -0.91
VMA21-203ENST00000477649 GJB2P29033 226 aa9.36□□□□□ -0.91
VMA21-203ENST00000477649 PI16Q6UXB8 463 aa9.36□□□□□ -0.91
VMA21-203ENST00000477649 TMEM87AQ8NBN3 555 aa9.36□□□□□ -0.91
VMA21-203ENST00000477649 WDR66Q8TBY9 1149 aa9.36□□□□□ -0.91
VMA21-203ENST00000477649 TMEM87BQ96K49 555 aa9.36□□□□□ -0.91
VMA21-203ENST00000477649 KRT23Q9C075 422 aa9.36□□□□□ -0.91
VMA21-203ENST00000477649 NAPBQ9H115 298 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms