RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 HMGB1P09429 215 aaKnown RBP17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 ST5P78524 1137 aa17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 GORABQ5T7V8 394 aa17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 SRLQ86TD4 932 aa17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 TCEANC2Q96MN5 208 aa17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 CARD6Q9BX69 1037 aa17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 RSPH14Q9UHP6 348 aa17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 ITGB4P16144 1822 aa17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 ME1P48163 572 aa17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 NLRP12P59046 1061 aa17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 ADALQ6DHV7 355 aa17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 PLCD3Q8N3E9 789 aa17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 USP28Q96RU2 1077 aa17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 SDF4Q9BRK5 362 aa17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 TMX1Q9H3N1 280 aa17.62■□□□□ 0.41
CLSTN1-205ENST00000477264 PAPPAQ13219 1627 aa17.61■□□□□ 0.41
CLSTN1-205ENST00000477264 DDX21Q9NR30 783 aaKnown RBP eCLIP17.61■□□□□ 0.41
CLSTN1-205ENST00000477264 UBR2Q8IWV8 1755 aa17.61■□□□□ 0.41
CLSTN1-205ENST00000477264 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.61■□□□□ 0.41
CLSTN1-205ENST00000477264 ANXA1P04083 346 aa17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 BRD3Q15059 726 aa17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 Q6ZUG5 572 aa17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 RSRC2Q7L4I2 434 aaKnown RBP17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 NSUN7Q8NE18 718 aaKnown RBP17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 CCDC151A5D8V7 595 aa17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 TAF5LO75529 589 aa17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 RPS6KA5O75582 802 aa17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 SASH3O75995 380 aa17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 SEC31AO94979 1220 aaKnown RBP17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 ACTN2P35609 894 aa17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 NOP2P46087 812 aaKnown RBP17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 FAM98CQ17RN3 349 aaKnown RBP17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 SYTL4Q96C24 671 aaPredicted RBP17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 BRMS1Q9HCU9 246 aa17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 ATG3Q9NT62 314 aa17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 RTEL1Q9NZ71 1219 aa17.6■□□□□ 0.41
CLSTN1-205ENST00000477264 LAMB4A4D0S4 1761 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 POTEB2H3BUK9 544 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 ARHGAP6O43182 974 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 PTCD1O75127 700 aaKnown RBP17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 TUBB4BP68371 445 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 CEBPZQ03701 1054 aaKnown RBP17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 DPCR1Q3MIW9 517 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 LEKR1Q6ZMV7 388 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 REXO1L1PQ8IX06 675 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 GOLGA1Q92805 767 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 DDX11Q96FC9 970 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 MAP3K9P80192 1104 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 FANCCQ00597 558 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 PPP2R3AQ06190 1150 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 SCRN1Q12765 414 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 KCNG4Q8TDN1 519 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 PIGBQ92521 554 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 FUT8Q9BYC5 575 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 RRP15Q9Y3B9 282 aaKnown RBP17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 MRFAP1Q9Y605 127 aa17.59■□□□□ 0.41
CLSTN1-205ENST00000477264 A0A0G2JS52 829 aa17.58■□□□□ 0.4
CLSTN1-205ENST00000477264 YEATS4O95619 227 aa17.58■□□□□ 0.4
CLSTN1-205ENST00000477264 COL9A3Q14050 684 aaPredicted RBP17.58■□□□□ 0.4
CLSTN1-205ENST00000477264 SALL1Q9NSC2 1324 aa17.58■□□□□ 0.4
CLSTN1-205ENST00000477264 PTPDC1A2A3K4 754 aa17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 PI4KAP2A4QPH2 592 aa17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 DDX58O95786 925 aaKnown RBP17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 SLC3A2P08195 630 aaKnown RBP17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 NCAPHQ15003 741 aa17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 PROSER3Q2NL68 480 aa17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 PI4KAP1Q8N8J0 262 aa17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 KCPQ6ZWJ8 1503 aa17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 DOT1LQ8TEK3 1739 aa17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 DHX16O60231 1041 aaKnown RBP17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 MYL6BP14649 208 aa17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 G3BP1Q13283 466 aaKnown RBP eCLIP17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 HNRNPLLQ8WVV9 542 aaKnown RBP17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 GEMIN8Q9NWZ8 242 aaKnown RBP17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 ADAM21Q9UKJ8 722 aa17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 PCDHA7Q9UN72 937 aa17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 TAF6LQ9Y6J9 622 aa17.57■□□□□ 0.4
CLSTN1-205ENST00000477264 A0A1B0GUL7 405 aa17.56■□□□□ 0.4
CLSTN1-205ENST00000477264 EIF3JO75822 258 aaKnown RBP17.56■□□□□ 0.4
CLSTN1-205ENST00000477264 ZNF589Q86UQ0 364 aaPredicted RBP17.56■□□□□ 0.4
CLSTN1-205ENST00000477264 C10orf67Q8IYJ2 551 aa17.56■□□□□ 0.4
CLSTN1-205ENST00000477264 BCL9O00512 1426 aa17.56■□□□□ 0.4
CLSTN1-205ENST00000477264 MAP2K7O14733 419 aa17.56■□□□□ 0.4
CLSTN1-205ENST00000477264 LMAN1P49257 510 aa17.56■□□□□ 0.4
CLSTN1-205ENST00000477264 PDIA6Q15084 440 aa17.56■□□□□ 0.4
CLSTN1-205ENST00000477264 MARCH10Q8NA82 808 aaPredicted RBP17.56■□□□□ 0.4
CLSTN1-205ENST00000477264 C9orf78Q9NZ63 289 aaPredicted RBP17.56■□□□□ 0.4
CLSTN1-205ENST00000477264 ASAP1Q9ULH1 1129 aa17.56■□□□□ 0.4
CLSTN1-205ENST00000477264 NEDD4P46934 1319 aa17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 AFF2P51816 1311 aa17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 VWA3AA6NCI4 1184 aa17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 TXLNAP40222 546 aa17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 AIMP1Q12904 312 aaKnown RBP17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 ICE2Q659A1 982 aa17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 VSTM4Q8IW00 320 aa17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 EAF2Q96CJ1 260 aaPredicted RBP17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 AGXT2Q9BYV1 514 aa17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 FTOQ9C0B1 505 aaKnown RBP eCLIP17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 PPP2R2CQ9Y2T4 447 aa17.55■□□□□ 0.4
CLSTN1-205ENST00000477264 GLI3P10071 1580 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms