RNA–Protein interactions for RNA: ENST00000477054.6

GSDMB-208, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 4,655 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-208ENST00000477054 CCDC178Q5BJE1 867 aa11.15□□□□□ -0.62
GSDMB-208ENST00000477054 AXDND1Q5T1B0 1012 aaPredicted RBP11.15□□□□□ -0.62
GSDMB-208ENST00000477054 NBPF5PQ86XG9 351 aaPredicted RBP11.15□□□□□ -0.62
GSDMB-208ENST00000477054 ELP1O95163 1332 aa11.15□□□□□ -0.62
GSDMB-208ENST00000477054 PREX1Q8TCU6 1659 aa11.15□□□□□ -0.62
GSDMB-208ENST00000477054 TRIM75PA6NK02 468 aa11.15□□□□□ -0.63
GSDMB-208ENST00000477054 RPGRQ92834 1020 aaKnown RBP11.15□□□□□ -0.63
GSDMB-208ENST00000477054 ACSBG1Q96GR2 724 aa11.15□□□□□ -0.63
GSDMB-208ENST00000477054 CHAMP1Q96JM3 812 aa11.15□□□□□ -0.63
GSDMB-208ENST00000477054 RAB34Q9BZG1 259 aa11.15□□□□□ -0.63
GSDMB-208ENST00000477054 BTG4Q9NY30 223 aa11.15□□□□□ -0.63
GSDMB-208ENST00000477054 FRMPD1Q5SYB0 1578 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 OVOS2A0A0J9YW53 1432 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 OVOS2Q6IE36 1432 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 PFKFB2O60825 505 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 DTNBO60941 627 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 SSBP05455 408 aaKnown RBP eCLIP11.14□□□□□ -0.63
GSDMB-208ENST00000477054 MTX1Q13505 466 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 ANO1Q5XXA6 986 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 DNAJC10Q8IXB1 793 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 CCDC148Q8NFR7 591 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 ZNF274Q96GC6 653 aaPredicted RBP11.14□□□□□ -0.63
GSDMB-208ENST00000477054 TLR7Q9NYK1 1049 aaKnown RBP11.14□□□□□ -0.63
GSDMB-208ENST00000477054 DBNLQ9UJU6 430 aaKnown RBP11.14□□□□□ -0.63
GSDMB-208ENST00000477054 SH3TC1Q8TE82 1336 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 CPS1P31327 1500 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 PRAMEF22A3QJZ6 481 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 FAM193AP78312 1265 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 GSTO1P78417 241 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 PARP10Q53GL7 1025 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 TSC1Q92574 1164 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 NUP88Q99567 741 aaPredicted RBP11.14□□□□□ -0.63
GSDMB-208ENST00000477054 KIF2CQ99661 725 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 FAM107BQ9H098 131 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 GPR108Q9NPR9 543 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 B4E1Z4 1266 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 CLGNO14967 610 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 YEATS4O95619 227 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 RXRAP19793 462 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 LMOD1P29536 600 aaPredicted RBP11.14□□□□□ -0.63
GSDMB-208ENST00000477054 FKBP15Q5T1M5 1219 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 GIMAP7Q8NHV1 300 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 CPLX3Q8WVH0 158 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 ZHX3Q9H4I2 956 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 KCNA4P22459 653 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 ZAP70P43403 619 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 ZNF75DP51815 510 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 TMEM266Q2M3C6 531 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 KIF4BQ2VIQ3 1234 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 TTLL7Q6ZT98 887 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 KRI1Q8N9T8 703 aaKnown RBP11.14□□□□□ -0.63
GSDMB-208ENST00000477054 NLRP3Q96P20 1036 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 CTAGE1Q96RT6 745 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 GBP3Q9H0R5 595 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 TCP11L1Q9NUJ3 509 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 RMND1Q9NWS8 449 aa11.14□□□□□ -0.63
GSDMB-208ENST00000477054 IVLP07476 585 aa11.13□□□□□ -0.63
GSDMB-208ENST00000477054 UBA7P41226 1012 aa11.13□□□□□ -0.63
GSDMB-208ENST00000477054 CCDC181Q5TID7 509 aa11.13□□□□□ -0.63
GSDMB-208ENST00000477054 MIGA1Q8NAN2 632 aa11.13□□□□□ -0.63
GSDMB-208ENST00000477054 LPIN2Q92539 896 aa11.13□□□□□ -0.63
GSDMB-208ENST00000477054 SEC62Q99442 399 aaKnown RBP11.13□□□□□ -0.63
GSDMB-208ENST00000477054 CLEC17AQ6ZS10 378 aa11.13□□□□□ -0.63
GSDMB-208ENST00000477054 ADCY9O60503 1353 aa11.13□□□□□ -0.63
GSDMB-208ENST00000477054 GNAQP50148 359 aa11.13□□□□□ -0.63
GSDMB-208ENST00000477054 NGLY1Q96IV0 654 aa11.13□□□□□ -0.63
GSDMB-208ENST00000477054 SETDB2Q96T68 719 aa11.13□□□□□ -0.63
GSDMB-208ENST00000477054 CDCA7Q9BWT1 371 aaPredicted RBP11.13□□□□□ -0.63
GSDMB-208ENST00000477054 IFNKQ9P0W0 207 aa11.13□□□□□ -0.63
GSDMB-208ENST00000477054 NRKQ7Z2Y5 1582 aa11.13□□□□□ -0.63
GSDMB-208ENST00000477054 COL3A1P02461 1466 aaPredicted RBP11.12□□□□□ -0.63
GSDMB-208ENST00000477054 PTPRUQ92729 1446 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 FGFR1OPO95684 399 aaKnown RBP11.12□□□□□ -0.63
GSDMB-208ENST00000477054 HSPD1P10809 573 aaKnown RBP11.12□□□□□ -0.63
GSDMB-208ENST00000477054 CDR1P51861 262 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 RBM5P52756 815 aaKnown RBP eCLIP11.12□□□□□ -0.63
GSDMB-208ENST00000477054 MROH1Q8NDA8 1641 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 AMPD3Q01432 767 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 NYXQ9GZU5 481 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 MROH5Q6ZUA9 1318 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 KRT2P35908 639 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 AFMP43652 599 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 TTC6Q86TZ1 520 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 ZSCAN29Q8IWY8 852 aaPredicted RBP11.12□□□□□ -0.63
GSDMB-208ENST00000477054 TMEM94Q12767 1356 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 CIAO1O76071 339 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 SASH1O94885 1247 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 LIG1P18858 919 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 SPAG1Q07617 926 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 SPA17Q15506 151 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 RILPL1Q5EBL4 403 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 TSG101Q99816 390 aa11.12□□□□□ -0.63
GSDMB-208ENST00000477054 ARHGEF28Q8N1W1 1705 aaKnown RBP11.12□□□□□ -0.63
GSDMB-208ENST00000477054 SLU7O95391 586 aaKnown RBP11.11□□□□□ -0.63
GSDMB-208ENST00000477054 PCCAP05165 728 aaPredicted RBP11.11□□□□□ -0.63
GSDMB-208ENST00000477054 LMAN1P49257 510 aa11.11□□□□□ -0.63
GSDMB-208ENST00000477054 GNG11P61952 73 aa11.11□□□□□ -0.63
GSDMB-208ENST00000477054 MYL5Q02045 173 aa11.11□□□□□ -0.63
GSDMB-208ENST00000477054 C10orf67Q8IYJ2 551 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms