RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 NLGN1Q8N2Q7 840 aa9.38□□□□□ -0.91
RBM39-230ENST00000476806 CNBD1Q8NA66 436 aa9.38□□□□□ -0.91
RBM39-230ENST00000476806 KBTBD3Q8NAB2 608 aa9.38□□□□□ -0.91
RBM39-230ENST00000476806 IL17RAQ96F46 866 aa9.38□□□□□ -0.91
RBM39-230ENST00000476806 NEUROD6Q96NK8 337 aa9.38□□□□□ -0.91
RBM39-230ENST00000476806 TMX4Q9H1E5 349 aaPredicted RBP9.38□□□□□ -0.91
RBM39-230ENST00000476806 DDX60Q8IY21 1712 aaKnown RBP9.38□□□□□ -0.91
RBM39-230ENST00000476806 DUOX1Q9NRD9 1551 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 C4AP0C0L4 1744 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 ARAP2Q8WZ64 1704 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 PTMSP20962 102 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 NT5C2P49902 561 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 UBE4AQ14139 1066 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 CAVIN4Q5BKX8 364 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 DDX46Q7L014 1031 aaKnown RBP9.37□□□□□ -0.91
RBM39-230ENST00000476806 PTF1AQ7RTS3 328 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 ATG9AQ7Z3C6 839 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 CERS3Q8IU89 383 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 ZNF516Q92618 1163 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 USP26Q9BXU7 913 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 SNRKQ9NRH2 765 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 HELLSQ9NRZ9 838 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 BSDC1Q9NW68 430 aaPredicted RBP9.37□□□□□ -0.91
RBM39-230ENST00000476806 TSKSQ9UJT2 592 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 DBNLQ9UJU6 430 aaKnown RBP9.37□□□□□ -0.91
RBM39-230ENST00000476806 RIPOR2Q9Y4F9 1068 aa9.37□□□□□ -0.91
RBM39-230ENST00000476806 UBR3Q6ZT12 1888 aa9.36□□□□□ -0.91
RBM39-230ENST00000476806 PDS5AQ29RF7 1337 aaKnown RBP9.36□□□□□ -0.91
RBM39-230ENST00000476806 HMGB1P09429 215 aaKnown RBP9.36□□□□□ -0.91
RBM39-230ENST00000476806 KCNJ4P48050 445 aa9.36□□□□□ -0.91
RBM39-230ENST00000476806 ANKRD1Q15327 319 aa9.36□□□□□ -0.91
RBM39-230ENST00000476806 TXNRD1Q16881 649 aa9.36□□□□□ -0.91
RBM39-230ENST00000476806 RTL5Q5HYW3 569 aaPredicted RBP9.36□□□□□ -0.91
RBM39-230ENST00000476806 USPL1Q5W0Q7 1092 aa9.36□□□□□ -0.91
RBM39-230ENST00000476806 ZGPATQ8N5A5 531 aaKnown RBP9.36□□□□□ -0.91
RBM39-230ENST00000476806 OTUD7AQ8TE49 926 aaPredicted RBP9.36□□□□□ -0.91
RBM39-230ENST00000476806 ARHGEF1Q92888 912 aaKnown RBP9.36□□□□□ -0.91
RBM39-230ENST00000476806 CCDC8Q9H0W5 538 aaPredicted RBP9.36□□□□□ -0.91
RBM39-230ENST00000476806 BCL11AQ9H165 835 aa9.36□□□□□ -0.91
RBM39-230ENST00000476806 GREM2Q9H772 168 aa9.36□□□□□ -0.91
RBM39-230ENST00000476806 PAG1Q9NWQ8 432 aa9.36□□□□□ -0.91
RBM39-230ENST00000476806 CTNNA3Q9UI47 895 aa9.36□□□□□ -0.91
RBM39-230ENST00000476806 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.35□□□□□ -0.91
RBM39-230ENST00000476806 K7ELQ4 463 aaPredicted RBP9.35□□□□□ -0.91
RBM39-230ENST00000476806 ARID4AP29374 1257 aaPredicted RBP9.35□□□□□ -0.91
RBM39-230ENST00000476806 SAMD7Q7Z3H4 446 aa9.35□□□□□ -0.91
RBM39-230ENST00000476806 PACS2Q86VP3 889 aa9.35□□□□□ -0.91
RBM39-230ENST00000476806 BOLA2Q9H3K6 86 aa9.35□□□□□ -0.91
RBM39-230ENST00000476806 CWC22Q9HCG8 908 aaKnown RBP9.35□□□□□ -0.91
RBM39-230ENST00000476806 RPAP1Q9BWH6 1393 aaPredicted RBP9.35□□□□□ -0.91
RBM39-230ENST00000476806 QSER1Q2KHR3 1735 aa9.34□□□□□ -0.91
RBM39-230ENST00000476806 HSPA4P34932 840 aa9.34□□□□□ -0.91
RBM39-230ENST00000476806 MAP3K12Q12852 859 aa9.34□□□□□ -0.91
RBM39-230ENST00000476806 MCMDC2Q4G0Z9 681 aa9.34□□□□□ -0.91
RBM39-230ENST00000476806 GRIPAP1Q4V328 841 aa9.34□□□□□ -0.91
RBM39-230ENST00000476806 VPS37DQ86XT2 251 aa9.34□□□□□ -0.91
RBM39-230ENST00000476806 KLHDC4Q8TBB5 520 aa9.34□□□□□ -0.91
RBM39-230ENST00000476806 RPGRQ92834 1020 aaKnown RBP9.34□□□□□ -0.91
RBM39-230ENST00000476806 XAGE2Q96GT9 111 aa9.34□□□□□ -0.91
RBM39-230ENST00000476806 RBM17Q96I25 401 aaKnown RBP9.34□□□□□ -0.91
RBM39-230ENST00000476806 DBNDD2Q9BQY9 259 aa9.34□□□□□ -0.91
RBM39-230ENST00000476806 DSCC1Q9BVC3 393 aa9.34□□□□□ -0.91
RBM39-230ENST00000476806 TM6SF1Q9BZW5 370 aa9.34□□□□□ -0.91
RBM39-230ENST00000476806 TFCP2L1Q9NZI6 479 aa9.34□□□□□ -0.91
RBM39-230ENST00000476806 CASZ1Q86V15 1759 aa9.34□□□□□ -0.91
RBM39-230ENST00000476806 CCDC171Q6TFL3 1326 aa9.33□□□□□ -0.92
RBM39-230ENST00000476806 GNAT2P19087 354 aa9.33□□□□□ -0.92
RBM39-230ENST00000476806 RPS8P62241 208 aaKnown RBP9.33□□□□□ -0.92
RBM39-230ENST00000476806 LRRC24Q50LG9 513 aa9.33□□□□□ -0.92
RBM39-230ENST00000476806 TBC1D9BQ66K14 1250 aa9.33□□□□□ -0.92
RBM39-230ENST00000476806 CWC27Q6UX04 472 aaKnown RBP9.33□□□□□ -0.92
RBM39-230ENST00000476806 VGLL2Q8N8G2 317 aa9.33□□□□□ -0.92
RBM39-230ENST00000476806 DNAJC2Q99543 621 aaKnown RBP9.33□□□□□ -0.92
RBM39-230ENST00000476806 ANP32EQ9BTT0 268 aa9.33□□□□□ -0.92
RBM39-230ENST00000476806 DENND2AQ9ULE3 1009 aa9.33□□□□□ -0.92
RBM39-230ENST00000476806 LEMD3Q9Y2U8 911 aa9.33□□□□□ -0.92
RBM39-230ENST00000476806 MED23Q9ULK4 1368 aa9.33□□□□□ -0.92
RBM39-230ENST00000476806 BBOX1O75936 387 aa9.32□□□□□ -0.92
RBM39-230ENST00000476806 HCLS1P14317 486 aaPredicted RBP9.32□□□□□ -0.92
RBM39-230ENST00000476806 FGFR2P21802 821 aa9.32□□□□□ -0.92
RBM39-230ENST00000476806 PDE6BP35913 854 aa9.32□□□□□ -0.92
RBM39-230ENST00000476806 GRAPQ13588 217 aa9.32□□□□□ -0.92
RBM39-230ENST00000476806 GRAPLQ8TC17 118 aaPredicted RBP9.32□□□□□ -0.92
RBM39-230ENST00000476806 APPBP2Q92624 585 aa9.32□□□□□ -0.92
RBM39-230ENST00000476806 SH2B1Q9NRF2 756 aaPredicted RBP9.32□□□□□ -0.92
RBM39-230ENST00000476806 PARP3Q9Y6F1 533 aa9.32□□□□□ -0.92
RBM39-230ENST00000476806 ZMYM6O95789 1325 aa9.31□□□□□ -0.92
RBM39-230ENST00000476806 RNF113AO15541 343 aaKnown RBP9.31□□□□□ -0.92
RBM39-230ENST00000476806 ALDH1B1P30837 517 aa9.31□□□□□ -0.92
RBM39-230ENST00000476806 CHRNDQ07001 517 aa9.31□□□□□ -0.92
RBM39-230ENST00000476806 UBE3CQ15386 1083 aa9.31□□□□□ -0.92
RBM39-230ENST00000476806 WASHC4Q2M389 1173 aa9.31□□□□□ -0.92
RBM39-230ENST00000476806 TSGA10IPQ3SY00 556 aa9.31□□□□□ -0.92
RBM39-230ENST00000476806 ERFEQ4G0M1 354 aa9.31□□□□□ -0.92
RBM39-230ENST00000476806 TSHZ3Q63HK5 1081 aa9.31□□□□□ -0.92
RBM39-230ENST00000476806 SPTY2D1Q68D10 685 aaPredicted RBP9.31□□□□□ -0.92
RBM39-230ENST00000476806 TRIM67Q6ZTA4 783 aa9.31□□□□□ -0.92
RBM39-230ENST00000476806 NKX2-3Q8TAU0 364 aa9.31□□□□□ -0.92
RBM39-230ENST00000476806 JARID2Q92833 1246 aaPredicted RBP9.31□□□□□ -0.92
RBM39-230ENST00000476806 MAP4K1Q92918 833 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms