RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ATF7IPQ6VMQ6 1270 aa13.46□□□□□ -0.25
SEC13-214ENST00000476597 ABHD8Q96I13 439 aa13.46□□□□□ -0.25
SEC13-214ENST00000476597 SIL1Q9H173 461 aa13.46□□□□□ -0.25
SEC13-214ENST00000476597 FZD1Q9UP38 647 aa13.46□□□□□ -0.25
SEC13-214ENST00000476597 PA2G4Q9UQ80 394 aaKnown RBP13.46□□□□□ -0.25
SEC13-214ENST00000476597 SUGT1Q9Y2Z0 365 aa13.46□□□□□ -0.25
SEC13-214ENST00000476597 COL1A1P02452 1464 aaPredicted RBP13.46□□□□□ -0.25
SEC13-214ENST00000476597 PAPPA2Q9BXP8 1791 aa13.45□□□□□ -0.26
SEC13-214ENST00000476597 UNCXA6NJT0 531 aa13.45□□□□□ -0.26
SEC13-214ENST00000476597 PPP1R12BO60237 982 aaPredicted RBP13.45□□□□□ -0.26
SEC13-214ENST00000476597 HNRNPUQ00839 825 aaKnown RBP eCLIP13.45□□□□□ -0.26
SEC13-214ENST00000476597 MTX1Q13505 466 aa13.45□□□□□ -0.26
SEC13-214ENST00000476597 TNFAIP1Q13829 316 aa13.45□□□□□ -0.26
SEC13-214ENST00000476597 FRAT1Q92837 279 aaPredicted RBP13.45□□□□□ -0.26
SEC13-214ENST00000476597 TNNQ9UQP3 1299 aa13.45□□□□□ -0.26
SEC13-214ENST00000476597 A0A1B0GUL6 1792 aa13.45□□□□□ -0.26
SEC13-214ENST00000476597 USP2O75604 605 aaPredicted RBP13.44□□□□□ -0.26
SEC13-214ENST00000476597 ATP2B3Q16720 1220 aa13.44□□□□□ -0.26
SEC13-214ENST00000476597 SPRYD7Q5W111 196 aa13.44□□□□□ -0.26
SEC13-214ENST00000476597 WDR66Q8TBY9 1149 aa13.44□□□□□ -0.26
SEC13-214ENST00000476597 SLC10A4Q96EP9 437 aa13.44□□□□□ -0.26
SEC13-214ENST00000476597 ZBTB22O15209 634 aa13.43□□□□□ -0.26
SEC13-214ENST00000476597 APOBEC3HQ6NTF7 200 aaKnown RBP13.43□□□□□ -0.26
SEC13-214ENST00000476597 HHIPL2Q6UWX4 724 aa13.43□□□□□ -0.26
SEC13-214ENST00000476597 TEKT1Q969V4 418 aa13.43□□□□□ -0.26
SEC13-214ENST00000476597 CLUAP1Q96AJ1 413 aa13.43□□□□□ -0.26
SEC13-214ENST00000476597 ZDHHC15Q96MV8 337 aa13.43□□□□□ -0.26
SEC13-214ENST00000476597 TEPSINQ96N21 525 aa13.43□□□□□ -0.26
SEC13-214ENST00000476597 SSC5DA1L4H1 1573 aa13.42□□□□□ -0.26
SEC13-214ENST00000476597 TCP10L2B9ZVM9 353 aa13.42□□□□□ -0.26
SEC13-214ENST00000476597 SRGAP3O43295 1099 aa13.42□□□□□ -0.26
SEC13-214ENST00000476597 GNAI2P04899 355 aa13.42□□□□□ -0.26
SEC13-214ENST00000476597 IREB2P48200 963 aaKnown RBP13.42□□□□□ -0.26
SEC13-214ENST00000476597 MKRN3Q13064 507 aaKnown RBP13.42□□□□□ -0.26
SEC13-214ENST00000476597 ZKSCAN2Q63HK3 967 aa13.42□□□□□ -0.26
SEC13-214ENST00000476597 CLMNQ96JQ2 1002 aa13.42□□□□□ -0.26
SEC13-214ENST00000476597 MCOLN1Q9GZU1 580 aa13.42□□□□□ -0.26
SEC13-214ENST00000476597 GNL3LQ9NVN8 582 aaKnown RBP13.42□□□□□ -0.26
SEC13-214ENST00000476597 MAST3O60307 1309 aa13.41□□□□□ -0.26
SEC13-214ENST00000476597 TNNI2P48788 182 aa13.41□□□□□ -0.26
SEC13-214ENST00000476597 INHBEP58166 350 aa13.41□□□□□ -0.26
SEC13-214ENST00000476597 TIMM10P62072 90 aa13.41□□□□□ -0.26
SEC13-214ENST00000476597 SREBF2Q12772 1141 aa13.41□□□□□ -0.26
SEC13-214ENST00000476597 DGKZQ13574 1117 aa13.41□□□□□ -0.26
SEC13-214ENST00000476597 TMEM39BQ9GZU3 492 aa13.41□□□□□ -0.26
SEC13-214ENST00000476597 SEMA3EO15041 775 aa13.4□□□□□ -0.26
SEC13-214ENST00000476597 TBC1D8O95759 1140 aa13.4□□□□□ -0.26
SEC13-214ENST00000476597 ZBTB48P10074 688 aaPredicted RBP13.4□□□□□ -0.26
SEC13-214ENST00000476597 ADORA1P30542 326 aa13.4□□□□□ -0.26
SEC13-214ENST00000476597 PHKA1P46020 1223 aa13.4□□□□□ -0.26
SEC13-214ENST00000476597 FKBP1CQ5VVH2 108 aa13.4□□□□□ -0.26
SEC13-214ENST00000476597 CCDC102BQ68D86 513 aa13.4□□□□□ -0.26
SEC13-214ENST00000476597 CDAN1Q8IWY9 1227 aa13.4□□□□□ -0.26
SEC13-214ENST00000476597 ANKRD13AQ8IZ07 590 aa13.4□□□□□ -0.26
SEC13-214ENST00000476597 TMEM57Q8N5G2 664 aa13.4□□□□□ -0.26
SEC13-214ENST00000476597 WNK4Q96J92 1243 aa13.4□□□□□ -0.26
SEC13-214ENST00000476597 CFHR5Q9BXR6 569 aa13.4□□□□□ -0.26
SEC13-214ENST00000476597 DENND2AQ9ULE3 1009 aa13.4□□□□□ -0.26
SEC13-214ENST00000476597 MANSC4A6NHS7 340 aaPredicted RBP13.39□□□□□ -0.27
SEC13-214ENST00000476597 CACNB3P54284 484 aa13.39□□□□□ -0.27
SEC13-214ENST00000476597 TFCP2Q12800 502 aa13.39□□□□□ -0.27
SEC13-214ENST00000476597 FAM83AQ86UY5 434 aa13.39□□□□□ -0.27
SEC13-214ENST00000476597 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.39□□□□□ -0.27
SEC13-214ENST00000476597 AKAP2Q9Y2D5 859 aa13.39□□□□□ -0.27
SEC13-214ENST00000476597 SALL1Q9NSC2 1324 aa13.39□□□□□ -0.27
SEC13-214ENST00000476597 PNMA6EA0A0J9YXQ4 647 aa13.38□□□□□ -0.27
SEC13-214ENST00000476597 A0A1B0GUL7 405 aa13.38□□□□□ -0.27
SEC13-214ENST00000476597 ALDH1A1P00352 501 aa13.38□□□□□ -0.27
SEC13-214ENST00000476597 PRDX5P30044 214 aa13.38□□□□□ -0.27
SEC13-214ENST00000476597 MAP3K9P80192 1104 aa13.38□□□□□ -0.27
SEC13-214ENST00000476597 NOM1Q5C9Z4 860 aaKnown RBP13.38□□□□□ -0.27
SEC13-214ENST00000476597 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.38□□□□□ -0.27
SEC13-214ENST00000476597 XAGE2Q96GT9 111 aa13.38□□□□□ -0.27
SEC13-214ENST00000476597 TMOD2Q9NZR1 351 aa13.38□□□□□ -0.27
SEC13-214ENST00000476597 DAGLAQ9Y4D2 1042 aa13.38□□□□□ -0.27
SEC13-214ENST00000476597 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.38□□□□□ -0.27
SEC13-214ENST00000476597 ZBED9Q6R2W3 1325 aa13.38□□□□□ -0.27
SEC13-214ENST00000476597 CCDC85CA6NKD9 419 aa13.37□□□□□ -0.27
SEC13-214ENST00000476597 GPR25O00155 361 aa13.37□□□□□ -0.27
SEC13-214ENST00000476597 LDHBP07195 334 aaKnown RBP13.37□□□□□ -0.27
SEC13-214ENST00000476597 GJA5P36382 358 aa13.37□□□□□ -0.27
SEC13-214ENST00000476597 DIXDC1Q155Q3 683 aa13.37□□□□□ -0.27
SEC13-214ENST00000476597 CTU1Q7Z7A3 348 aaKnown RBP13.37□□□□□ -0.27
SEC13-214ENST00000476597 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.37□□□□□ -0.27
SEC13-214ENST00000476597 ZNF296Q8WUU4 475 aaPredicted RBP13.37□□□□□ -0.27
SEC13-214ENST00000476597 R3HDMLQ9H3Y0 253 aa13.37□□□□□ -0.27
SEC13-214ENST00000476597 TESPA1A2RU30 521 aaPredicted RBP13.36□□□□□ -0.27
SEC13-214ENST00000476597 ZBTB7BO15156 539 aaPredicted RBP13.36□□□□□ -0.27
SEC13-214ENST00000476597 ATP8B2P98198 1209 aa13.36□□□□□ -0.27
SEC13-214ENST00000476597 G3BP1Q13283 466 aaKnown RBP eCLIP13.36□□□□□ -0.273e-11■■■■□ 19.3
SEC13-214ENST00000476597 RASGRF1Q13972 1273 aa13.36□□□□□ -0.27
SEC13-214ENST00000476597 POLA2Q14181 598 aa13.36□□□□□ -0.27
SEC13-214ENST00000476597 CDC42EP5Q6NZY7 148 aa13.36□□□□□ -0.27
SEC13-214ENST00000476597 IFNL1Q8IU54 200 aa13.36□□□□□ -0.27
SEC13-214ENST00000476597 FAM151AQ8WW52 585 aa13.36□□□□□ -0.27
SEC13-214ENST00000476597 NEUROD6Q96NK8 337 aa13.36□□□□□ -0.27
SEC13-214ENST00000476597 ELP3Q9H9T3 547 aa13.36□□□□□ -0.27
SEC13-214ENST00000476597 PDS5AQ29RF7 1337 aaKnown RBP13.36□□□□□ -0.27
SEC13-214ENST00000476597 CASP8AP2Q9UKL3 1982 aa13.35□□□□□ -0.27
SEC13-214ENST00000476597 IGF2BP3O00425 579 aaKnown RBP eCLIP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms