RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 UNCXA6NJT0 531 aa10.54□□□□□ -0.72
SATB1-213ENST00000476178 USP2O75604 605 aaPredicted RBP10.54□□□□□ -0.72
SATB1-213ENST00000476178 IFIT1P09914 478 aaKnown RBP10.54□□□□□ -0.72
SATB1-213ENST00000476178 ZBTB48P10074 688 aaPredicted RBP10.54□□□□□ -0.72
SATB1-213ENST00000476178 CRKP46108 304 aa10.54□□□□□ -0.72
SATB1-213ENST00000476178 TNNI2P48788 182 aa10.54□□□□□ -0.72
SATB1-213ENST00000476178 BCAMP50895 628 aa10.54□□□□□ -0.72
SATB1-213ENST00000476178 MAP3K11Q16584 847 aa10.54□□□□□ -0.72
SATB1-213ENST00000476178 SPDYE2Q495Y8 402 aa10.54□□□□□ -0.72
SATB1-213ENST00000476178 OTUD7BQ6GQQ9 843 aa10.54□□□□□ -0.72
SATB1-213ENST00000476178 ANKRD13AQ8IZ07 590 aa10.54□□□□□ -0.72
SATB1-213ENST00000476178 VGLL2Q8N8G2 317 aa10.54□□□□□ -0.72
SATB1-213ENST00000476178 TBC1D22AQ8WUA7 517 aa10.54□□□□□ -0.72
SATB1-213ENST00000476178 ARHGAP45Q92619 1136 aa10.54□□□□□ -0.72
SATB1-213ENST00000476178 WNK4Q96J92 1243 aa10.54□□□□□ -0.72
SATB1-213ENST00000476178 HPS5Q9UPZ3 1129 aa10.54□□□□□ -0.72
SATB1-213ENST00000476178 PUM3Q15397 648 aaKnown RBP10.53□□□□□ -0.72
SATB1-213ENST00000476178 IFNL1Q8IU54 200 aa10.53□□□□□ -0.72
SATB1-213ENST00000476178 R3HDMLQ9H3Y0 253 aa10.53□□□□□ -0.72
SATB1-213ENST00000476178 TMOD2Q9NZR1 351 aa10.53□□□□□ -0.72
SATB1-213ENST00000476178 EYA2O00167 538 aa10.52□□□□□ -0.73
SATB1-213ENST00000476178 BCAR3O75815 825 aa10.52□□□□□ -0.73
SATB1-213ENST00000476178 UBTFL1P0CB47 393 aaPredicted RBP10.52□□□□□ -0.73
SATB1-213ENST00000476178 SLC5A1P13866 664 aa10.52□□□□□ -0.73
SATB1-213ENST00000476178 GRIK5Q16478 980 aa10.52□□□□□ -0.73
SATB1-213ENST00000476178 NOM1Q5C9Z4 860 aaKnown RBP10.52□□□□□ -0.73
SATB1-213ENST00000476178 INTS3Q68E01 1043 aaKnown RBP10.52□□□□□ -0.73
SATB1-213ENST00000476178 TEKT1Q969V4 418 aa10.52□□□□□ -0.73
SATB1-213ENST00000476178 TMEM39BQ9GZU3 492 aa10.52□□□□□ -0.73
SATB1-213ENST00000476178 ELP3Q9H9T3 547 aa10.52□□□□□ -0.73
SATB1-213ENST00000476178 FGFR2P21802 821 aa10.51□□□□□ -0.73
SATB1-213ENST00000476178 CACNB3P54284 484 aa10.51□□□□□ -0.73
SATB1-213ENST00000476178 MAP3K9P80192 1104 aa10.51□□□□□ -0.73
SATB1-213ENST00000476178 HDLBPQ00341 1268 aaKnown RBP10.51□□□□□ -0.73
SATB1-213ENST00000476178 HNRNPUQ00839 825 aaKnown RBP eCLIP10.51□□□□□ -0.73
SATB1-213ENST00000476178 FBXO46Q6PJ61 603 aaPredicted RBP10.51□□□□□ -0.73
SATB1-213ENST00000476178 ATG9AQ7Z3C6 839 aa10.51□□□□□ -0.73
SATB1-213ENST00000476178 OPTNQ96CV9 577 aa10.51□□□□□ -0.73
SATB1-213ENST00000476178 MEIS3Q99687 375 aa10.51□□□□□ -0.73
SATB1-213ENST00000476178 CFHR5Q9BXR6 569 aa10.51□□□□□ -0.73
SATB1-213ENST00000476178 SIL1Q9H173 461 aa10.51□□□□□ -0.73
SATB1-213ENST00000476178 HDAC5Q9UQL6 1122 aa10.51□□□□□ -0.73
SATB1-213ENST00000476178 TNNQ9UQP3 1299 aa10.51□□□□□ -0.73
SATB1-213ENST00000476178 CSADQ9Y600 493 aa10.51□□□□□ -0.73
SATB1-213ENST00000476178 KIF16BQ96L93 1317 aa10.51□□□□□ -0.73
SATB1-213ENST00000476178 IGF2BP3O00425 579 aaKnown RBP eCLIP10.5□□□□□ -0.73
SATB1-213ENST00000476178 LPIN2Q92539 896 aa10.5□□□□□ -0.73
SATB1-213ENST00000476178 TEPSINQ96N21 525 aa10.5□□□□□ -0.73
SATB1-213ENST00000476178 GNL3LQ9NVN8 582 aaKnown RBP10.5□□□□□ -0.73
SATB1-213ENST00000476178 CEP126Q9P2H0 1117 aa10.5□□□□□ -0.73
SATB1-213ENST00000476178 TRIM17Q9Y577 477 aa10.5□□□□□ -0.73
SATB1-213ENST00000476178 LRRFIP2Q9Y608 721 aaKnown RBP10.5□□□□□ -0.73
SATB1-213ENST00000476178 SSC5DA1L4H1 1573 aa10.5□□□□□ -0.73
SATB1-213ENST00000476178 MAST3O60307 1309 aa10.5□□□□□ -0.73
SATB1-213ENST00000476178 IPO8O15397 1037 aaKnown RBP10.49□□□□□ -0.73
SATB1-213ENST00000476178 CIAO1O76071 339 aa10.49□□□□□ -0.73
SATB1-213ENST00000476178 TRIM27P14373 513 aa10.49□□□□□ -0.73
SATB1-213ENST00000476178 GJA5P36382 358 aa10.49□□□□□ -0.73
SATB1-213ENST00000476178 CRHR2Q13324 411 aa10.49□□□□□ -0.73
SATB1-213ENST00000476178 ATF7IPQ6VMQ6 1270 aa10.49□□□□□ -0.73
SATB1-213ENST00000476178 CDAN1Q8IWY9 1227 aa10.49□□□□□ -0.73
SATB1-213ENST00000476178 WDR66Q8TBY9 1149 aa10.49□□□□□ -0.73
SATB1-213ENST00000476178 HOOK2Q96ED9 719 aa10.49□□□□□ -0.73
SATB1-213ENST00000476178 OTUD5Q96G74 571 aa10.49□□□□□ -0.73
SATB1-213ENST00000476178 ERO1AQ96HE7 468 aa10.49□□□□□ -0.73
SATB1-213ENST00000476178 ZDHHC15Q96MV8 337 aa10.49□□□□□ -0.73
SATB1-213ENST00000476178 MRIQ9BWK5 157 aa10.49□□□□□ -0.73
SATB1-213ENST00000476178 FBXO3Q9UK99 471 aa10.49□□□□□ -0.73
SATB1-213ENST00000476178 SUGT1Q9Y2Z0 365 aa10.49□□□□□ -0.73
SATB1-213ENST00000476178 CCL15-CCL14A0A0B4J2E2 113 aa10.48□□□□□ -0.73
SATB1-213ENST00000476178 WDHD1O75717 1129 aaPredicted RBP10.48□□□□□ -0.73
SATB1-213ENST00000476178 GTF2A2P52657 109 aa10.48□□□□□ -0.73
SATB1-213ENST00000476178 VGLL4Q14135 290 aa10.48□□□□□ -0.73
SATB1-213ENST00000476178 CCL15Q16663 113 aa10.48□□□□□ -0.73
SATB1-213ENST00000476178 ATP2B3Q16720 1220 aa10.48□□□□□ -0.73
SATB1-213ENST00000476178 HHIPL2Q6UWX4 724 aa10.48□□□□□ -0.73
SATB1-213ENST00000476178 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.48□□□□□ -0.73
SATB1-213ENST00000476178 CNKSR2Q8WXI2 1034 aa10.48□□□□□ -0.73
SATB1-213ENST00000476178 FRAT1Q92837 279 aaPredicted RBP10.48□□□□□ -0.73
SATB1-213ENST00000476178 PTPN18Q99952 460 aa10.48□□□□□ -0.73
SATB1-213ENST00000476178 COPRSQ9NQ92 184 aa10.48□□□□□ -0.73
SATB1-213ENST00000476178 PA2G4Q9UQ80 394 aaKnown RBP10.48□□□□□ -0.73
SATB1-213ENST00000476178 GNAI3P08754 354 aa10.47□□□□□ -0.73
SATB1-213ENST00000476178 SP3Q02447 781 aa10.47□□□□□ -0.73
SATB1-213ENST00000476178 MTX1Q13505 466 aa10.47□□□□□ -0.73
SATB1-213ENST00000476178 TAF1CQ15572 869 aaPredicted RBP10.47□□□□□ -0.73
SATB1-213ENST00000476178 FKBP1CQ5VVH2 108 aa10.47□□□□□ -0.73
SATB1-213ENST00000476178 DCAF15Q66K64 600 aa10.47□□□□□ -0.73
SATB1-213ENST00000476178 APOBEC3HQ6NTF7 200 aaKnown RBP10.47□□□□□ -0.73
SATB1-213ENST00000476178 OTOP1Q7RTM1 612 aa10.47□□□□□ -0.73
SATB1-213ENST00000476178 FAM83AQ86UY5 434 aa10.47□□□□□ -0.73
SATB1-213ENST00000476178 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.47□□□□□ -0.73
SATB1-213ENST00000476178 CD99L2Q8TCZ2 262 aa10.47□□□□□ -0.73
SATB1-213ENST00000476178 WRNIP1Q96S55 665 aa10.47□□□□□ -0.73
SATB1-213ENST00000476178 EFCC1Q9HA90 598 aa10.47□□□□□ -0.73
SATB1-213ENST00000476178 ZFYVE28Q9HCC9 887 aa10.47□□□□□ -0.73
SATB1-213ENST00000476178 ECM29Q5VYK3 1845 aa10.47□□□□□ -0.73
SATB1-213ENST00000476178 TESPA1A2RU30 521 aaPredicted RBP10.46□□□□□ -0.73
SATB1-213ENST00000476178 LDHBP07195 334 aaKnown RBP10.46□□□□□ -0.73
SATB1-213ENST00000476178 IL15P40933 162 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms