RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 PPP2R3AQ06190 1150 aa20.46■□□□□ 0.87
CCM2-207ENST00000475551 JAKMIP3Q5VZ66 844 aa20.46■□□□□ 0.87
CCM2-207ENST00000475551 TMEM139Q8IV31 216 aa20.46■□□□□ 0.87
CCM2-207ENST00000475551 FBXO18Q8NFZ0 1043 aa20.46■□□□□ 0.87
CCM2-207ENST00000475551 DPF2Q92785 391 aa20.46■□□□□ 0.87
CCM2-207ENST00000475551 EPC1Q9H2F5 836 aa20.46■□□□□ 0.87
CCM2-207ENST00000475551 AHDC1Q5TGY3 1603 aaPredicted RBP20.46■□□□□ 0.87
CCM2-207ENST00000475551 SERPINC1P01008 464 aa20.46■□□□□ 0.87
CCM2-207ENST00000475551 BRAPQ7Z569 592 aa20.46■□□□□ 0.87
CCM2-207ENST00000475551 FBXL16Q8N461 479 aa20.46■□□□□ 0.87
CCM2-207ENST00000475551 EFCC1Q9HA90 598 aa20.46■□□□□ 0.87
CCM2-207ENST00000475551 IGKV5-2P06315 115 aa20.45■□□□□ 0.86
CCM2-207ENST00000475551 TOP1P11387 765 aaKnown RBP20.45■□□□□ 0.86
CCM2-207ENST00000475551 MYL5Q02045 173 aa20.45■□□□□ 0.86
CCM2-207ENST00000475551 IQUBQ8NA54 791 aa20.45■□□□□ 0.86
CCM2-207ENST00000475551 CCDC191Q8NCU4 936 aa20.45■□□□□ 0.86
CCM2-207ENST00000475551 PARD6BQ9BYG5 372 aa20.45■□□□□ 0.86
CCM2-207ENST00000475551 CFAP100Q494V2 611 aa20.45■□□□□ 0.86
CCM2-207ENST00000475551 AXDND1Q5T1B0 1012 aaPredicted RBP20.45■□□□□ 0.86
CCM2-207ENST00000475551 MYSM1Q5VVJ2 828 aa20.45■□□□□ 0.86
CCM2-207ENST00000475551 KBTBD3Q8NAB2 608 aa20.45■□□□□ 0.86
CCM2-207ENST00000475551 CCDC34Q96HJ3 373 aa20.45■□□□□ 0.86
CCM2-207ENST00000475551 HELLSQ9NRZ9 838 aa20.45■□□□□ 0.86
CCM2-207ENST00000475551 E7EWF7 191 aa20.44■□□□□ 0.86
CCM2-207ENST00000475551 MYO1CO00159 1063 aa20.44■□□□□ 0.86
CCM2-207ENST00000475551 PFKFB1P16118 471 aa20.44■□□□□ 0.86
CCM2-207ENST00000475551 ADAM21Q9UKJ8 722 aa20.44■□□□□ 0.86
CCM2-207ENST00000475551 NDUFB9Q9Y6M9 179 aa20.44■□□□□ 0.86
CCM2-207ENST00000475551 NBPF6Q5VWK0 638 aa20.44■□□□□ 0.86
CCM2-207ENST00000475551 NBPF4Q96M43 638 aa20.44■□□□□ 0.86
CCM2-207ENST00000475551 DDX21Q9NR30 783 aaKnown RBP eCLIP20.44■□□□□ 0.86
CCM2-207ENST00000475551 PHLPP1O60346 1717 aa20.43■□□□□ 0.86
CCM2-207ENST00000475551 GNG11P61952 73 aa20.43■□□□□ 0.86
CCM2-207ENST00000475551 TFCP2Q12800 502 aa20.43■□□□□ 0.86
CCM2-207ENST00000475551 TICAM2Q86XR7 235 aa20.43■□□□□ 0.86
CCM2-207ENST00000475551 GOLGA1Q92805 767 aa20.43■□□□□ 0.86
CCM2-207ENST00000475551 C8orf76Q96K31 380 aa20.43■□□□□ 0.86
CCM2-207ENST00000475551 WDR24Q96S15 920 aa20.43■□□□□ 0.86
CCM2-207ENST00000475551 PALLDQ8WX93 1383 aa20.43■□□□□ 0.86
CCM2-207ENST00000475551 CCDC151A5D8V7 595 aa20.43■□□□□ 0.86
CCM2-207ENST00000475551 RNMTO43148 476 aaKnown RBP20.43■□□□□ 0.86
CCM2-207ENST00000475551 MAPK8IP2Q13387 824 aaPredicted RBP20.43■□□□□ 0.86
CCM2-207ENST00000475551 GNL2Q13823 731 aaKnown RBP20.43■□□□□ 0.86
CCM2-207ENST00000475551 EPHA10Q5JZY3 1008 aa20.43■□□□□ 0.86
CCM2-207ENST00000475551 ZNF530Q6P9A1 599 aaPredicted RBP20.43■□□□□ 0.86
CCM2-207ENST00000475551 MPRIPQ6WCQ1 1025 aa20.43■□□□□ 0.86
CCM2-207ENST00000475551 IP6K1Q92551 441 aa20.43■□□□□ 0.86
CCM2-207ENST00000475551 MAP2K7O14733 419 aa20.42■□□□□ 0.86
CCM2-207ENST00000475551 PPFIA3O75145 1194 aa20.42■□□□□ 0.86
CCM2-207ENST00000475551 POLR3DP05423 398 aaPredicted RBP20.42■□□□□ 0.86
CCM2-207ENST00000475551 RFX5P48382 616 aaPredicted RBP20.42■□□□□ 0.86
CCM2-207ENST00000475551 BRD3Q15059 726 aa20.42■□□□□ 0.86
CCM2-207ENST00000475551 CABLES1Q8TDN4 633 aa20.42■□□□□ 0.86
CCM2-207ENST00000475551 KIFC2Q96AC6 838 aa20.42■□□□□ 0.86
CCM2-207ENST00000475551 OVOS2A0A0G2JMS6 1433 aa20.42■□□□□ 0.86
CCM2-207ENST00000475551 NEURL1BA8MQ27 555 aa20.42■□□□□ 0.86
CCM2-207ENST00000475551 TXLNAP40222 546 aa20.42■□□□□ 0.86
CCM2-207ENST00000475551 ANO1Q5XXA6 986 aa20.42■□□□□ 0.86
CCM2-207ENST00000475551 SYNE3Q6ZMZ3 975 aa20.42■□□□□ 0.86
CCM2-207ENST00000475551 DDX46Q7L014 1031 aaKnown RBP20.42■□□□□ 0.86
CCM2-207ENST00000475551 PLCD3Q8N3E9 789 aa20.42■□□□□ 0.86
CCM2-207ENST00000475551 STX10O60499 249 aa20.41■□□□□ 0.86
CCM2-207ENST00000475551 PTPN12Q05209 780 aaKnown RBP20.41■□□□□ 0.86
CCM2-207ENST00000475551 TBX2Q13207 712 aaPredicted RBP20.41■□□□□ 0.86
CCM2-207ENST00000475551 LONRF2Q1L5Z9 754 aa20.41■□□□□ 0.86
CCM2-207ENST00000475551 PLEKHO1Q53GL0 409 aaPredicted RBP20.41■□□□□ 0.86
CCM2-207ENST00000475551 FAM177A1Q8N128 213 aaPredicted RBP20.41■□□□□ 0.86
CCM2-207ENST00000475551 DBNDD2Q9BQY9 259 aa20.41■□□□□ 0.86
CCM2-207ENST00000475551 ATG3Q9NT62 314 aa20.41■□□□□ 0.86
CCM2-207ENST00000475551 PRAMEF22A3QJZ6 481 aa20.41■□□□□ 0.86
CCM2-207ENST00000475551 ACTN2P35609 894 aa20.41■□□□□ 0.86
CCM2-207ENST00000475551 GCKRQ14397 625 aa20.41■□□□□ 0.86
CCM2-207ENST00000475551 OTUD7BQ6GQQ9 843 aa20.41■□□□□ 0.86
CCM2-207ENST00000475551 SRLQ86TD4 932 aa20.41■□□□□ 0.86
CCM2-207ENST00000475551 BAG1Q99933 345 aaPredicted RBP20.41■□□□□ 0.86
CCM2-207ENST00000475551 RSPH14Q9UHP6 348 aa20.41■□□□□ 0.86
CCM2-207ENST00000475551 TMEM232C9JQI7 657 aa20.4■□□□□ 0.86
CCM2-207ENST00000475551 TNNT3P45378 269 aaPredicted RBP20.4■□□□□ 0.86
CCM2-207ENST00000475551 NEXNQ0ZGT2 675 aa20.4■□□□□ 0.86
CCM2-207ENST00000475551 AIMP1Q12904 312 aaKnown RBP20.4■□□□□ 0.86
CCM2-207ENST00000475551 ISM2Q6H9L7 571 aa20.4■□□□□ 0.86
CCM2-207ENST00000475551 RIC3Q7Z5B4 369 aa20.4■□□□□ 0.86
CCM2-207ENST00000475551 COL16A1Q07092 1604 aaPredicted RBP20.4■□□□□ 0.86
CCM2-207ENST00000475551 SYKP43405 635 aa20.39■□□□□ 0.86
CCM2-207ENST00000475551 LMAN1P49257 510 aa20.39■□□□□ 0.86
CCM2-207ENST00000475551 GOLGA8FQ08AF8 430 aa20.39■□□□□ 0.86
CCM2-207ENST00000475551 GOLGA8DPQ0D2H9 430 aa20.39■□□□□ 0.86
CCM2-207ENST00000475551 PDIA6Q15084 440 aa20.39■□□□□ 0.86
CCM2-207ENST00000475551 MSL3Q8N5Y2 521 aaKnown RBP20.39■□□□□ 0.86
CCM2-207ENST00000475551 RGS22Q8NE09 1264 aa20.39■□□□□ 0.86
CCM2-207ENST00000475551 HNRNPLLQ8WVV9 542 aaKnown RBP20.39■□□□□ 0.86
CCM2-207ENST00000475551 LRRC59Q96AG4 307 aaKnown RBP20.39■□□□□ 0.86
CCM2-207ENST00000475551 LCMT1Q9UIC8 334 aa20.39■□□□□ 0.86
CCM2-207ENST00000475551 HPSEQ9Y251 543 aa20.39■□□□□ 0.86
CCM2-207ENST00000475551 H3BQF6 201 aa20.39■□□□□ 0.85
CCM2-207ENST00000475551 MROH7-TTC4A0A0A0MT08 1334 aa20.39■□□□□ 0.85
CCM2-207ENST00000475551 WDHD1O75717 1129 aaPredicted RBP20.38■□□□□ 0.85
CCM2-207ENST00000475551 HSPD1P10809 573 aaKnown RBP20.38■□□□□ 0.85
CCM2-207ENST00000475551 SLC39A14Q15043 492 aa20.38■□□□□ 0.85
CCM2-207ENST00000475551 AMOTQ4VCS5 1084 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms