RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 ECE2O60344 883 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 IFIT1BQ5T764 474 aaKnown RBP6.5□□□□□ -1.37
CBWD1-212ENST00000475411 CCDC73Q6ZRK6 1079 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 VPS33BQ9H267 617 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 GPR108Q9NPR9 543 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 PRKAG2Q9UGJ0 569 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 PA2G4Q9UQ80 394 aaKnown RBP6.5□□□□□ -1.37
CBWD1-212ENST00000475411 JAG2Q9Y219 1238 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 C9orf131Q5VYM1 1079 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 SMARCC2Q8TAQ2 1214 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 JAKMIP1Q96N16 626 aaKnown RBP6.49□□□□□ -1.37
CBWD1-212ENST00000475411 NAP1L4Q99733 375 aaKnown RBP6.49□□□□□ -1.37
CBWD1-212ENST00000475411 ATRNO75882 1429 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 MYO5BQ9ULV0 1848 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 CCDC194A0A1B0GVG4 234 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 TCP10L2B9ZVM9 353 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 NT5C2P49902 561 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 KRT26Q7Z3Y9 468 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 CHURC1Q8WUH1 139 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 CCDC17Q96LX7 622 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 PLEKHF1Q96S99 279 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 GZF1Q9H116 711 aaPredicted RBP6.49□□□□□ -1.37
CBWD1-212ENST00000475411 HELLSQ9NRZ9 838 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 PDRG1Q9NUG6 133 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 ABCC6O95255 1503 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 IBTKQ9P2D0 1353 aaPredicted RBP6.49□□□□□ -1.37
CBWD1-212ENST00000475411 XRN1Q8IZH2 1706 aaKnown RBP6.49□□□□□ -1.37
CBWD1-212ENST00000475411 PDE8BO95263 885 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 CHRNA5P30532 468 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 MCM5P33992 734 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 TRIM28Q13263 835 aaKnown RBP6.49□□□□□ -1.37
CBWD1-212ENST00000475411 GREM2Q9H772 168 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 ZNF277Q9NRM2 450 aaPredicted RBP6.49□□□□□ -1.37
CBWD1-212ENST00000475411 SWAP70Q9UH65 585 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 ATP6V0A2Q9Y487 856 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 MBD4O95243 580 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 TPM1P09493 284 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 SREBF2Q12772 1141 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 KIF4BQ2VIQ3 1234 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 APBB1IPQ7Z5R6 666 aaPredicted RBP6.49□□□□□ -1.37
CBWD1-212ENST00000475411 BICD2Q8TD16 824 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 APPBP2Q92624 585 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 ZNF594Q96JF6 807 aaPredicted RBP6.49□□□□□ -1.37
CBWD1-212ENST00000475411 ZNF341Q9BYN7 854 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 CWC15Q9P013 229 aaKnown RBP6.49□□□□□ -1.37
CBWD1-212ENST00000475411 SUGT1Q9Y2Z0 365 aa6.49□□□□□ -1.37
CBWD1-212ENST00000475411 SMARCA5O60264 1052 aaPredicted RBP6.48□□□□□ -1.37
CBWD1-212ENST00000475411 TSR1Q2NL82 804 aaKnown RBP6.48□□□□□ -1.37
CBWD1-212ENST00000475411 MIGA1Q8NAN2 632 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 SMC1BQ8NDV3 1235 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 MAPK8IP2Q13387 824 aaPredicted RBP6.48□□□□□ -1.37
CBWD1-212ENST00000475411 HDAC1Q13547 482 aaPredicted RBP6.48□□□□□ -1.37
CBWD1-212ENST00000475411 BEND3Q5T5X7 828 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 CEP85Q6P2H3 762 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 CHD2O14647 1828 aaKnown RBP6.48□□□□□ -1.37
CBWD1-212ENST00000475411 AOX1Q06278 1338 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 SIGLEC1Q9BZZ2 1709 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 IFT172Q9UG01 1749 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 NEK4P51957 841 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 HMGN5P82970 282 aaKnown RBP6.48□□□□□ -1.37
CBWD1-212ENST00000475411 SSRP1Q08945 709 aaKnown RBP6.48□□□□□ -1.37
CBWD1-212ENST00000475411 TCP10Q12799 353 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 ITPK1Q13572 414 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 RRP36Q96EU6 259 aaKnown RBP6.48□□□□□ -1.37
CBWD1-212ENST00000475411 SPDYE3A6NKU9 549 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 CAMTA2O94983 1202 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 BTDP43251 543 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 NUCB2P80303 420 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 NCBP1Q09161 790 aaKnown RBP6.48□□□□□ -1.37
CBWD1-212ENST00000475411 AOC3Q16853 763 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 ERMNQ8TAM6 284 aa6.48□□□□□ -1.37
CBWD1-212ENST00000475411 FHDC1Q9C0D6 1143 aaPredicted RBP6.48□□□□□ -1.37
CBWD1-212ENST00000475411 ATP2B1P20020 1258 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 GYG1P46976 350 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 SCNN1DP51172 638 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 NLRP5P59047 1200 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 DHX37Q8IY37 1157 aaKnown RBP6.47□□□□□ -1.37
CBWD1-212ENST00000475411 TMEM106CQ9BVX2 250 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 PDCL3Q9H2J4 239 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 COPRSQ9NQ92 184 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 SAP30BPQ9UHR5 308 aaKnown RBP6.47□□□□□ -1.37
CBWD1-212ENST00000475411 ANGEL1Q9UNK9 670 aaKnown RBP6.47□□□□□ -1.37
CBWD1-212ENST00000475411 MEGF6O75095 1541 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 DKC1O60832 514 aaKnown RBP eCLIP6.47□□□□□ -1.37
CBWD1-212ENST00000475411 GYS1P13807 737 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 EPS15P42566 896 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 CDC37L1Q7L3B6 337 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 AATFQ9NY61 560 aaKnown RBP eCLIP6.47□□□□□ -1.37
CBWD1-212ENST00000475411 PES1O00541 588 aaKnown RBP6.47□□□□□ -1.37
CBWD1-212ENST00000475411 ZEB2O60315 1214 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 TPM3P06753 285 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 PARP1P09874 1014 aaKnown RBP6.47□□□□□ -1.37
CBWD1-212ENST00000475411 NEFHP12036 1026 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 COPB2P35606 906 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 STK38Q15208 465 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 SPRYD3Q8NCJ5 442 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 KIF20BQ96Q89 1820 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 CSRNP1Q96S65 589 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 ISCA1Q9BUE6 129 aa6.47□□□□□ -1.37
CBWD1-212ENST00000475411 BCL9O00512 1426 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms