RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 TRDNQ13061 729 aa21.61■■□□□ 1.05
SEC61A2-213ENST00000475268 TBC1D10CQ8IV04 446 aa21.61■■□□□ 1.05
SEC61A2-213ENST00000475268 RPGRQ92834 1020 aaKnown RBP21.61■■□□□ 1.05
SEC61A2-213ENST00000475268 NAPBQ9H115 298 aa21.61■■□□□ 1.05
SEC61A2-213ENST00000475268 GDPD2Q9HCC8 539 aa21.61■■□□□ 1.05
SEC61A2-213ENST00000475268 GPHNQ9NQX3 736 aaPredicted RBP21.61■■□□□ 1.05
SEC61A2-213ENST00000475268 ANKIB1Q9P2G1 1089 aa21.61■■□□□ 1.05
SEC61A2-213ENST00000475268 ATP6V1DQ9Y5K8 247 aa21.61■■□□□ 1.05
SEC61A2-213ENST00000475268 PRKAB2O43741 272 aa21.61■■□□□ 1.05
SEC61A2-213ENST00000475268 ALX1Q15699 326 aa21.61■■□□□ 1.05
SEC61A2-213ENST00000475268 GPT2Q8TD30 523 aa21.61■■□□□ 1.05
SEC61A2-213ENST00000475268 EPB41L4AQ9HCS5 686 aaPredicted RBP21.61■■□□□ 1.05
SEC61A2-213ENST00000475268 GOLGA6L3A6NEY3 463 aa21.6■■□□□ 1.05
SEC61A2-213ENST00000475268 APBA3O96018 575 aa21.6■■□□□ 1.05
SEC61A2-213ENST00000475268 CCT2P78371 535 aaKnown RBP21.6■■□□□ 1.05
SEC61A2-213ENST00000475268 SLC51AQ86UW1 340 aa21.6■■□□□ 1.05
SEC61A2-213ENST00000475268 FBXL16Q8N461 479 aa21.6■■□□□ 1.05
SEC61A2-213ENST00000475268 SLC4A4Q9Y6R1 1079 aa21.6■■□□□ 1.05
SEC61A2-213ENST00000475268 PNPLA7Q6ZV29 1317 aa21.6■■□□□ 1.05
SEC61A2-213ENST00000475268 GSG1L2A8MUP6 293 aa21.6■■□□□ 1.05
SEC61A2-213ENST00000475268 SEMA3EO15041 775 aa21.6■■□□□ 1.05
SEC61A2-213ENST00000475268 PDIA4P13667 645 aaKnown RBP21.6■■□□□ 1.05
SEC61A2-213ENST00000475268 GNAT2P19087 354 aa21.6■■□□□ 1.05
SEC61A2-213ENST00000475268 ANTXR2P58335 489 aa21.6■■□□□ 1.05
SEC61A2-213ENST00000475268 ADGRA1Q86SQ6 560 aa21.6■■□□□ 1.05
SEC61A2-213ENST00000475268 PDIA3P30101 505 aaKnown RBP21.59■■□□□ 1.05
SEC61A2-213ENST00000475268 CAVIN1Q6NZI2 390 aaKnown RBP21.59■■□□□ 1.05
SEC61A2-213ENST00000475268 TXNRD3Q86VQ6 643 aa21.59■■□□□ 1.05
SEC61A2-213ENST00000475268 DDX11Q96FC9 970 aa21.59■■□□□ 1.05
SEC61A2-213ENST00000475268 ZNF274Q96GC6 653 aaPredicted RBP21.59■■□□□ 1.05
SEC61A2-213ENST00000475268 ZMYM6O95789 1325 aa21.59■■□□□ 1.05
SEC61A2-213ENST00000475268 HMGB2P26583 209 aaKnown RBP21.58■■□□□ 1.05
SEC61A2-213ENST00000475268 DDR1Q08345 913 aa21.58■■□□□ 1.05
SEC61A2-213ENST00000475268 CDC37L1Q7L3B6 337 aa21.58■■□□□ 1.05
SEC61A2-213ENST00000475268 LLPHQ9BRT6 129 aaKnown RBP21.58■■□□□ 1.05
SEC61A2-213ENST00000475268 NACAP1Q9BZK3 213 aa21.58■■□□□ 1.05
SEC61A2-213ENST00000475268 NCOA5Q9HCD5 579 aaKnown RBP21.58■■□□□ 1.05
SEC61A2-213ENST00000475268 CNPY2Q9Y2B0 182 aa21.58■■□□□ 1.05
SEC61A2-213ENST00000475268 USP48Q86UV5 1035 aa21.58■■□□□ 1.04
SEC61A2-213ENST00000475268 TDO2P48775 406 aa21.57■■□□□ 1.04
SEC61A2-213ENST00000475268 ZNF827Q17R98 1081 aa21.57■■□□□ 1.04
SEC61A2-213ENST00000475268 MAGEB6P1A0A0J9YX57 407 aa21.57■■□□□ 1.04
SEC61A2-213ENST00000475268 FSD2A1L4K1 749 aa21.57■■□□□ 1.04
SEC61A2-213ENST00000475268 PLSCR1O15162 318 aa21.57■■□□□ 1.04
SEC61A2-213ENST00000475268 RXRBP28702 533 aa21.57■■□□□ 1.04
SEC61A2-213ENST00000475268 CHAF1AQ13111 956 aaPredicted RBP21.57■■□□□ 1.04
SEC61A2-213ENST00000475268 CRY2Q49AN0 593 aa21.57■■□□□ 1.04
SEC61A2-213ENST00000475268 POLRMTO00411 1230 aaKnown RBP21.56■■□□□ 1.04
SEC61A2-213ENST00000475268 EVCP57679 992 aa21.56■■□□□ 1.04
SEC61A2-213ENST00000475268 CTDSPL2Q05D32 466 aa21.56■■□□□ 1.04
SEC61A2-213ENST00000475268 L1TD1Q5T7N2 865 aaKnown RBP21.56■■□□□ 1.04
SEC61A2-213ENST00000475268 NAA16Q6N069 864 aaPredicted RBP21.56■■□□□ 1.04
SEC61A2-213ENST00000475268 FERMT3Q86UX7 667 aa21.56■■□□□ 1.04
SEC61A2-213ENST00000475268 FAM184AQ8NB25 1140 aa21.56■■□□□ 1.04
SEC61A2-213ENST00000475268 NSUN7Q8NE18 718 aaKnown RBP21.56■■□□□ 1.04
SEC61A2-213ENST00000475268 SMARCC2Q8TAQ2 1214 aa21.56■■□□□ 1.04
SEC61A2-213ENST00000475268 NSFL1CQ9UNZ2 370 aaKnown RBP21.56■■□□□ 1.04
SEC61A2-213ENST00000475268 WDR19Q8NEZ3 1342 aa21.56■■□□□ 1.04
SEC61A2-213ENST00000475268 B4E1Z4 1266 aa21.55■■□□□ 1.04
SEC61A2-213ENST00000475268 CTDNEP1O95476 244 aa21.55■■□□□ 1.04
SEC61A2-213ENST00000475268 NKX2-3Q8TAU0 364 aa21.55■■□□□ 1.04
SEC61A2-213ENST00000475268 RBM17Q96I25 401 aaKnown RBP21.55■■□□□ 1.04
SEC61A2-213ENST00000475268 INCENPQ9NQS7 918 aa21.55■■□□□ 1.04
SEC61A2-213ENST00000475268 BRPF3Q9ULD4 1205 aa21.55■■□□□ 1.04
SEC61A2-213ENST00000475268 LEMD3Q9Y2U8 911 aa21.55■■□□□ 1.04
SEC61A2-213ENST00000475268 XDHP47989 1333 aa21.55■■□□□ 1.04
SEC61A2-213ENST00000475268 KLF18A0A0U1RQI7 1052 aa21.55■■□□□ 1.04
SEC61A2-213ENST00000475268 MBD3O95983 291 aa21.55■■□□□ 1.04
SEC61A2-213ENST00000475268 DNM1Q05193 864 aaKnown RBP21.55■■□□□ 1.04
SEC61A2-213ENST00000475268 CYB5R4Q7L1T6 521 aa21.55■■□□□ 1.04
SEC61A2-213ENST00000475268 NEDD4P46934 1319 aa21.55■■□□□ 1.04
SEC61A2-213ENST00000475268 IRS2Q9Y4H2 1338 aa21.55■■□□□ 1.04
SEC61A2-213ENST00000475268 PTPDC1A2A3K4 754 aa21.54■■□□□ 1.04
SEC61A2-213ENST00000475268 RBM27Q9P2N5 1060 aaKnown RBP21.54■■□□□ 1.04
SEC61A2-213ENST00000475268 JAG2Q9Y219 1238 aa21.54■■□□□ 1.04
SEC61A2-213ENST00000475268 PDS5AQ29RF7 1337 aaKnown RBP21.54■■□□□ 1.04
SEC61A2-213ENST00000475268 FIBPO43427 364 aa21.54■■□□□ 1.04
SEC61A2-213ENST00000475268 GADD45BO75293 160 aaPredicted RBP21.54■■□□□ 1.04
SEC61A2-213ENST00000475268 ZNF384Q8TF68 577 aa21.54■■□□□ 1.04
SEC61A2-213ENST00000475268 SDR42E1Q8WUS8 393 aa21.54■■□□□ 1.04
SEC61A2-213ENST00000475268 TCHHQ07283 1943 aa21.53■■□□□ 1.04
SEC61A2-213ENST00000475268 GOLGA8BA8MQT2 603 aa21.53■■□□□ 1.04
SEC61A2-213ENST00000475268 HMGN5P82970 282 aaKnown RBP21.53■■□□□ 1.04
SEC61A2-213ENST00000475268 TMEM87AQ8NBN3 555 aa21.53■■□□□ 1.04
SEC61A2-213ENST00000475268 RIOK1Q9BRS2 568 aaKnown RBP21.53■■□□□ 1.04
SEC61A2-213ENST00000475268 CACNA1SQ13698 1873 aa21.53■■□□□ 1.04
SEC61A2-213ENST00000475268 PPFIA3O75145 1194 aa21.53■■□□□ 1.04
SEC61A2-213ENST00000475268 DYNLL1P63167 89 aaKnown RBP21.53■■□□□ 1.04
SEC61A2-213ENST00000475268 MECOMQ03112 1051 aa21.53■■□□□ 1.04
SEC61A2-213ENST00000475268 COL23A1Q86Y22 540 aaPredicted RBP21.53■■□□□ 1.04
SEC61A2-213ENST00000475268 AKT1S1Q96B36 256 aa21.53■■□□□ 1.04
SEC61A2-213ENST00000475268 NSUN4Q96CB9 384 aaKnown RBP21.53■■□□□ 1.04
SEC61A2-213ENST00000475268 CHMP4CQ96CF2 233 aa21.53■■□□□ 1.04
SEC61A2-213ENST00000475268 H3BQV1 296 aa21.52■■□□□ 1.04
SEC61A2-213ENST00000475268 GPSM2P81274 684 aa21.52■■□□□ 1.04
SEC61A2-213ENST00000475268 AKNAD1Q5T1N1 836 aa21.52■■□□□ 1.04
SEC61A2-213ENST00000475268 IFFO2Q5TF58 517 aa21.52■■□□□ 1.04
SEC61A2-213ENST00000475268 RAB11FIP4Q86YS3 637 aa21.52■■□□□ 1.04
SEC61A2-213ENST00000475268 GPR101Q96P66 508 aaPredicted RBP21.52■■□□□ 1.04
SEC61A2-213ENST00000475268 ANGEL1Q9UNK9 670 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms