RNA–Protein interactions for RNA: ENST00000474952.5

TFAP2A-210, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 1,621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-210ENST00000474952 CCDC88AQ3V6T2 1871 aa29.42■■■□□ 2.3
TFAP2A-210ENST00000474952 COL9A3Q14050 684 aaPredicted RBP29.42■■■□□ 2.3
TFAP2A-210ENST00000474952 NAA16Q6N069 864 aaPredicted RBP29.42■■■□□ 2.3
TFAP2A-210ENST00000474952 CNKSR1Q969H4 720 aa29.42■■■□□ 2.3
TFAP2A-210ENST00000474952 JAG2Q9Y219 1238 aa29.42■■■□□ 2.3
TFAP2A-210ENST00000474952 LAMA4Q16363 1823 aa29.41■■■□□ 2.3
TFAP2A-210ENST00000474952 SLX4Q8IY92 1834 aa29.41■■■□□ 2.3
TFAP2A-210ENST00000474952 IMMTQ16891 758 aaKnown RBP29.41■■■□□ 2.3
TFAP2A-210ENST00000474952 SPTY2D1Q68D10 685 aaPredicted RBP29.41■■■□□ 2.3
TFAP2A-210ENST00000474952 DPP8Q6V1X1 898 aaPredicted RBP29.41■■■□□ 2.3
TFAP2A-210ENST00000474952 LCORLQ8N3X6 602 aa29.41■■■□□ 2.3
TFAP2A-210ENST00000474952 ZGPATQ8N5A5 531 aaKnown RBP29.41■■■□□ 2.3
TFAP2A-210ENST00000474952 ZNF384Q8TF68 577 aa29.41■■■□□ 2.3
TFAP2A-210ENST00000474952 NSUN4Q96CB9 384 aaKnown RBP29.41■■■□□ 2.3
TFAP2A-210ENST00000474952 PATL2C9JE40 543 aaKnown RBP29.4■■■□□ 2.3
TFAP2A-210ENST00000474952 MECOMQ03112 1051 aa29.4■■■□□ 2.3
TFAP2A-210ENST00000474952 MIGA1Q8NAN2 632 aa29.4■■■□□ 2.3
TFAP2A-210ENST00000474952 ALDH8A1Q9H2A2 487 aaPredicted RBP29.4■■■□□ 2.3
TFAP2A-210ENST00000474952 CHMP5Q9NZZ3 219 aa29.4■■■□□ 2.3
TFAP2A-210ENST00000474952 APPP05067 770 aa29.39■■■□□ 2.3
TFAP2A-210ENST00000474952 GNAT2P19087 354 aa29.39■■■□□ 2.3
TFAP2A-210ENST00000474952 PRDX5P30044 214 aa29.39■■■□□ 2.3
TFAP2A-210ENST00000474952 ALX1Q15699 326 aa29.39■■■□□ 2.3
TFAP2A-210ENST00000474952 LIMCH1Q9UPQ0 1083 aa29.39■■■□□ 2.3
TFAP2A-210ENST00000474952 MAGEB6P1A0A0J9YX57 407 aa29.38■■■□□ 2.29
TFAP2A-210ENST00000474952 E7EWF7 191 aa29.38■■■□□ 2.29
TFAP2A-210ENST00000474952 CUL4AQ13619 759 aa29.38■■■□□ 2.29
TFAP2A-210ENST00000474952 TMED8Q6PL24 325 aaPredicted RBP29.38■■■□□ 2.29
TFAP2A-210ENST00000474952 DLEC1Q9Y238 1755 aa29.38■■■□□ 2.29
TFAP2A-210ENST00000474952 ZMYM6O95789 1325 aa29.38■■■□□ 2.29
TFAP2A-210ENST00000474952 IGSF3O75054 1194 aa29.38■■■□□ 2.29
TFAP2A-210ENST00000474952 KIAA1551Q9HCM1 1747 aa29.37■■■□□ 2.29
TFAP2A-210ENST00000474952 HMGB1P09429 215 aaKnown RBP29.37■■■□□ 2.29
TFAP2A-210ENST00000474952 ZNF213O14771 459 aa29.36■■■□□ 2.29
TFAP2A-210ENST00000474952 RIMBP2O15034 1052 aa29.36■■■□□ 2.29
TFAP2A-210ENST00000474952 HAND2P61296 217 aa29.36■■■□□ 2.29
TFAP2A-210ENST00000474952 RIOK1Q9BRS2 568 aaKnown RBP29.36■■■□□ 2.29
TFAP2A-210ENST00000474952 EPB41L4AQ9HCS5 686 aaPredicted RBP29.36■■■□□ 2.29
TFAP2A-210ENST00000474952 CIZ1Q9ULV3 898 aaPredicted RBP29.36■■■□□ 2.29
TFAP2A-210ENST00000474952 SLC4A4Q9Y6R1 1079 aa29.36■■■□□ 2.29
TFAP2A-210ENST00000474952 GSG1L2A8MUP6 293 aa29.35■■■□□ 2.29
TFAP2A-210ENST00000474952 PRKAB2O43741 272 aa29.35■■■□□ 2.29
TFAP2A-210ENST00000474952 IFNL3Q8IZI9 196 aa29.35■■■□□ 2.29
TFAP2A-210ENST00000474952 LARP6Q9BRS8 491 aaKnown RBP29.35■■■□□ 2.29
TFAP2A-210ENST00000474952 ZC3H12CQ9C0D7 883 aaKnown RBP29.35■■■□□ 2.29
TFAP2A-210ENST00000474952 COA1Q9GZY4 146 aa29.35■■■□□ 2.29
TFAP2A-210ENST00000474952 LDHBP07195 334 aaKnown RBP29.34■■■□□ 2.29
TFAP2A-210ENST00000474952 DZIP1Q86YF9 867 aaKnown RBP29.34■■■□□ 2.29
TFAP2A-210ENST00000474952 TCEANC2Q96MN5 208 aa29.34■■■□□ 2.29
TFAP2A-210ENST00000474952 KIF13BQ9NQT8 1826 aa29.34■■■□□ 2.29
TFAP2A-210ENST00000474952 ANKRD1Q15327 319 aa29.34■■■□□ 2.29
TFAP2A-210ENST00000474952 ZBTB7AO95365 584 aa29.33■■■□□ 2.29
TFAP2A-210ENST00000474952 DHX32Q7L7V1 743 aaKnown RBP29.33■■■□□ 2.29
TFAP2A-210ENST00000474952 C7orf43Q8WVR3 580 aa29.33■■■□□ 2.29
TFAP2A-210ENST00000474952 ZSCAN31Q96LW9 406 aaPredicted RBP29.33■■■□□ 2.29
TFAP2A-210ENST00000474952 EYA3Q99504 573 aa29.33■■■□□ 2.29
TFAP2A-210ENST00000474952 NAPBQ9H115 298 aa29.33■■■□□ 2.29
TFAP2A-210ENST00000474952 CWC22Q9HCG8 908 aaKnown RBP29.33■■■□□ 2.29
TFAP2A-210ENST00000474952 DYNLL1P63167 89 aaKnown RBP29.32■■■□□ 2.28
TFAP2A-210ENST00000474952 TOB2Q14106 344 aaPredicted RBP29.32■■■□□ 2.28
TFAP2A-210ENST00000474952 UPF1Q92900 1129 aaKnown RBP eCLIP29.32■■■□□ 2.28
TFAP2A-210ENST00000474952 INTS4Q96HW7 963 aaKnown RBP29.32■■■□□ 2.28
TFAP2A-210ENST00000474952 NACAP1Q9BZK3 213 aa29.32■■■□□ 2.28
TFAP2A-210ENST00000474952 NBPF3Q9H094 633 aa29.32■■■□□ 2.28
TFAP2A-210ENST00000474952 FAM205AQ6ZU69 1335 aa29.32■■■□□ 2.28
TFAP2A-210ENST00000474952 ZNF219Q9P2Y4 722 aaPredicted RBP29.31■■■□□ 2.28
TFAP2A-210ENST00000474952 CHD4Q14839 1912 aa29.31■■■□□ 2.28
TFAP2A-210ENST00000474952 EXOSC10Q01780 885 aaKnown RBP29.31■■■□□ 2.28
TFAP2A-210ENST00000474952 GRIK5Q16478 980 aa29.31■■■□□ 2.28
TFAP2A-210ENST00000474952 MTFR1LQ9H019 292 aa29.3■■■□□ 2.28
TFAP2A-210ENST00000474952 SH2B1Q9NRF2 756 aaPredicted RBP29.3■■■□□ 2.28
TFAP2A-210ENST00000474952 LARGE1O95461 756 aa29.29■■■□□ 2.28
TFAP2A-210ENST00000474952 GSTO1P78417 241 aa29.29■■■□□ 2.28
TFAP2A-210ENST00000474952 Q6ZUG5 572 aa29.29■■■□□ 2.28
TFAP2A-210ENST00000474952 TBC1D22AQ8WUA7 517 aa29.29■■■□□ 2.28
TFAP2A-210ENST00000474952 RTFDC1Q9BY42 306 aaPredicted RBP29.29■■■□□ 2.28
TFAP2A-210ENST00000474952 TPCN1Q9ULQ1 816 aa29.29■■■□□ 2.28
TFAP2A-210ENST00000474952 TDO2P48775 406 aa29.28■■■□□ 2.28
TFAP2A-210ENST00000474952 CC2D2BQ6DHV5 1058 aa29.28■■■□□ 2.28
TFAP2A-210ENST00000474952 TBC1D10CQ8IV04 446 aa29.28■■■□□ 2.28
TFAP2A-210ENST00000474952 ATF5Q9Y2D1 282 aaPredicted RBP29.28■■■□□ 2.28
TFAP2A-210ENST00000474952 SNED1Q8TER0 1413 aa29.27■■■□□ 2.28
TFAP2A-210ENST00000474952 SDR42E1Q8WUS8 393 aa29.27■■■□□ 2.28
TFAP2A-210ENST00000474952 AATFQ9NY61 560 aaKnown RBP eCLIP29.27■■■□□ 2.28
TFAP2A-210ENST00000474952 DPEP1P16444 411 aa29.27■■■□□ 2.28
TFAP2A-210ENST00000474952 R3HDM1Q15032 1099 aaKnown RBP29.27■■■□□ 2.28
TFAP2A-210ENST00000474952 ME3Q16798 604 aa29.27■■■□□ 2.28
TFAP2A-210ENST00000474952 DOK7Q18PE1 504 aa29.27■■■□□ 2.28
TFAP2A-210ENST00000474952 MFSD14BQ5SR56 506 aa29.27■■■□□ 2.28
TFAP2A-210ENST00000474952 TTLL6Q8N841 843 aa29.27■■■□□ 2.28
TFAP2A-210ENST00000474952 NCOA7Q8NI08 942 aa29.27■■■□□ 2.28
TFAP2A-210ENST00000474952 TIAM2Q8IVF5 1701 aa29.26■■■□□ 2.28
TFAP2A-210ENST00000474952 GTF2IP78347 998 aa29.26■■■□□ 2.27
TFAP2A-210ENST00000474952 MB21D2Q8IYB1 491 aaPredicted RBP29.26■■■□□ 2.27
TFAP2A-210ENST00000474952 KCNA3P22001 575 aa29.25■■■□□ 2.27
TFAP2A-210ENST00000474952 POLD1P28340 1107 aa29.25■■■□□ 2.27
TFAP2A-210ENST00000474952 RALYLQ86SE5 291 aaKnown RBP29.25■■■□□ 2.27
TFAP2A-210ENST00000474952 LRRC2Q9BYS8 371 aa29.25■■■□□ 2.27
TFAP2A-210ENST00000474952 MYH2Q9UKX2 1941 aa29.25■■■□□ 2.27
TFAP2A-210ENST00000474952 G3V3G9 751 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms