RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 HAND2P61296 217 aa23.52■■□□□ 1.36
SSR1-204ENST00000474597 STOX1Q6ZVD7 989 aa23.52■■□□□ 1.36
SSR1-204ENST00000474597 C2CD5Q86YS7 1000 aa23.52■■□□□ 1.36
SSR1-204ENST00000474597 TCEANC2Q96MN5 208 aa23.52■■□□□ 1.36
SSR1-204ENST00000474597 GPR101Q96P66 508 aaPredicted RBP23.52■■□□□ 1.36
SSR1-204ENST00000474597 H0YIN7 160 aa23.51■■□□□ 1.35
SSR1-204ENST00000474597 SPTY2D1Q68D10 685 aaPredicted RBP23.51■■□□□ 1.35
SSR1-204ENST00000474597 MIGA1Q8NAN2 632 aa23.51■■□□□ 1.35
SSR1-204ENST00000474597 TBC1D16Q8TBP0 767 aa23.51■■□□□ 1.35
SSR1-204ENST00000474597 WDR66Q8TBY9 1149 aa23.51■■□□□ 1.35
SSR1-204ENST00000474597 A0A0G2JLW4 131 aa23.5■■□□□ 1.35
SSR1-204ENST00000474597 MAGEB6P1A0A0J9YX57 407 aa23.5■■□□□ 1.35
SSR1-204ENST00000474597 FGD1P98174 961 aa23.5■■□□□ 1.35
SSR1-204ENST00000474597 TDRD7Q8NHU6 1098 aaKnown RBP23.5■■□□□ 1.35
SSR1-204ENST00000474597 NUCB2P80303 420 aa23.49■■□□□ 1.35
SSR1-204ENST00000474597 DHX32Q7L7V1 743 aaKnown RBP23.49■■□□□ 1.35
SSR1-204ENST00000474597 NACAP1Q9BZK3 213 aa23.49■■□□□ 1.35
SSR1-204ENST00000474597 NAPBQ9H115 298 aa23.49■■□□□ 1.35
SSR1-204ENST00000474597 MAST2Q6P0Q8 1798 aa23.49■■□□□ 1.35
SSR1-204ENST00000474597 RAB3GAP1Q15042 981 aa23.49■■□□□ 1.35
SSR1-204ENST00000474597 CCDC125Q86Z20 511 aa23.49■■□□□ 1.35
SSR1-204ENST00000474597 LCORLQ8N3X6 602 aa23.49■■□□□ 1.35
SSR1-204ENST00000474597 POLLQ9UGP5 575 aa23.49■■□□□ 1.35
SSR1-204ENST00000474597 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.49■■□□□ 1.35
SSR1-204ENST00000474597 SLC4A4Q9Y6R1 1079 aa23.49■■□□□ 1.35
SSR1-204ENST00000474597 COL9A3Q14050 684 aaPredicted RBP23.48■■□□□ 1.35
SSR1-204ENST00000474597 ALX1Q15699 326 aa23.48■■□□□ 1.35
SSR1-204ENST00000474597 TMED8Q6PL24 325 aaPredicted RBP23.48■■□□□ 1.35
SSR1-204ENST00000474597 JAG2Q9Y219 1238 aa23.48■■□□□ 1.35
SSR1-204ENST00000474597 LTBP1Q14766 1721 aa23.48■■□□□ 1.35
SSR1-204ENST00000474597 ZMYM6O95789 1325 aa23.48■■□□□ 1.35
SSR1-204ENST00000474597 SALL1Q9NSC2 1324 aa23.48■■□□□ 1.35
SSR1-204ENST00000474597 STYK1Q6J9G0 422 aa23.47■■□□□ 1.35
SSR1-204ENST00000474597 Q6ZUG5 572 aa23.47■■□□□ 1.35
SSR1-204ENST00000474597 IFNL3Q8IZI9 196 aa23.47■■□□□ 1.35
SSR1-204ENST00000474597 MPNDQ8N594 471 aa23.47■■□□□ 1.35
SSR1-204ENST00000474597 NSUN4Q96CB9 384 aaKnown RBP23.47■■□□□ 1.35
SSR1-204ENST00000474597 CD209Q9NNX6 404 aa23.47■■□□□ 1.35
SSR1-204ENST00000474597 MECOMQ03112 1051 aa23.47■■□□□ 1.35
SSR1-204ENST00000474597 TOB2Q14106 344 aaPredicted RBP23.47■■□□□ 1.35
SSR1-204ENST00000474597 RALYLQ86SE5 291 aaKnown RBP23.47■■□□□ 1.35
SSR1-204ENST00000474597 DZIP1Q86YF9 867 aaKnown RBP23.47■■□□□ 1.35
SSR1-204ENST00000474597 IGSF3O75054 1194 aa23.46■■□□□ 1.35
SSR1-204ENST00000474597 PRDX5P30044 214 aa23.46■■□□□ 1.35
SSR1-204ENST00000474597 TDO2P48775 406 aa23.46■■□□□ 1.35
SSR1-204ENST00000474597 TRDNQ13061 729 aa23.46■■□□□ 1.35
SSR1-204ENST00000474597 ADGRA1Q86SQ6 560 aa23.46■■□□□ 1.35
SSR1-204ENST00000474597 TPCN1Q9ULQ1 816 aa23.46■■□□□ 1.35
SSR1-204ENST00000474597 LARGE1O95461 756 aa23.45■■□□□ 1.34
SSR1-204ENST00000474597 LDHBP07195 334 aaKnown RBP23.45■■□□□ 1.34
SSR1-204ENST00000474597 DPP8Q6V1X1 898 aaPredicted RBP23.45■■□□□ 1.34
SSR1-204ENST00000474597 CCDC83Q8IWF9 413 aa23.45■■□□□ 1.34
SSR1-204ENST00000474597 NCOA7Q8NI08 942 aa23.45■■□□□ 1.34
SSR1-204ENST00000474597 GSG1L2A8MUP6 293 aa23.45■■□□□ 1.34
SSR1-204ENST00000474597 IL1R1P14778 569 aa23.45■■□□□ 1.34
SSR1-204ENST00000474597 ME3Q16798 604 aa23.45■■□□□ 1.34
SSR1-204ENST00000474597 SLC16A10Q8TF71 515 aa23.45■■□□□ 1.34
SSR1-204ENST00000474597 CHD4Q14839 1912 aa23.44■■□□□ 1.34
SSR1-204ENST00000474597 PRKAB2O43741 272 aa23.44■■□□□ 1.34
SSR1-204ENST00000474597 TNPO1Q92973 898 aaKnown RBP23.44■■□□□ 1.34
SSR1-204ENST00000474597 CNKSR1Q969H4 720 aa23.44■■□□□ 1.34
SSR1-204ENST00000474597 ZC3H12CQ9C0D7 883 aaKnown RBP23.44■■□□□ 1.34
SSR1-204ENST00000474597 PDGFDQ9GZP0 370 aaPredicted RBP23.44■■□□□ 1.34
SSR1-204ENST00000474597 EPB41L4AQ9HCS5 686 aaPredicted RBP23.44■■□□□ 1.34
SSR1-204ENST00000474597 DUOX1Q9NRD9 1551 aa23.44■■□□□ 1.34
SSR1-204ENST00000474597 EXOSC10Q01780 885 aaKnown RBP23.43■■□□□ 1.34
SSR1-204ENST00000474597 LRRC2Q9BYS8 371 aa23.43■■□□□ 1.34
SSR1-204ENST00000474597 SMC3Q9UQE7 1217 aa23.43■■□□□ 1.34
SSR1-204ENST00000474597 ZNF384Q8TF68 577 aa23.43■■□□□ 1.34
SSR1-204ENST00000474597 BRF1Q92994 677 aa23.43■■□□□ 1.34
SSR1-204ENST00000474597 GBP4Q96PP9 640 aa23.43■■□□□ 1.34
SSR1-204ENST00000474597 RIOK1Q9BRS2 568 aaKnown RBP23.43■■□□□ 1.34
SSR1-204ENST00000474597 RIMBP2O15034 1052 aa23.42■■□□□ 1.34
SSR1-204ENST00000474597 MCM5P33992 734 aa23.42■■□□□ 1.34
SSR1-204ENST00000474597 GSTO1P78417 241 aa23.42■■□□□ 1.34
SSR1-204ENST00000474597 KIAA1551Q9HCM1 1747 aa23.42■■□□□ 1.34
SSR1-204ENST00000474597 CHRNA5P30532 468 aa23.41■■□□□ 1.34
SSR1-204ENST00000474597 DYNLL1P63167 89 aaKnown RBP23.41■■□□□ 1.34
SSR1-204ENST00000474597 OLFM4Q6UX06 510 aa23.41■■□□□ 1.34
SSR1-204ENST00000474597 EYA3Q99504 573 aa23.41■■□□□ 1.34
SSR1-204ENST00000474597 COA1Q9GZY4 146 aa23.41■■□□□ 1.34
SSR1-204ENST00000474597 G3V3G9 751 aa23.4■■□□□ 1.34
SSR1-204ENST00000474597 DCAF8Q5TAQ9 597 aa23.4■■□□□ 1.34
SSR1-204ENST00000474597 NECAB1Q8N987 351 aa23.4■■□□□ 1.34
SSR1-204ENST00000474597 SDR42E1Q8WUS8 393 aa23.4■■□□□ 1.34
SSR1-204ENST00000474597 SLX4Q8IY92 1834 aa23.4■■□□□ 1.34
SSR1-204ENST00000474597 STK3Q13188 491 aa23.4■■□□□ 1.34
SSR1-204ENST00000474597 CHST3Q7LGC8 479 aa23.4■■□□□ 1.34
SSR1-204ENST00000474597 TBC1D10CQ8IV04 446 aa23.4■■□□□ 1.34
SSR1-204ENST00000474597 MB21D2Q8IYB1 491 aaPredicted RBP23.4■■□□□ 1.34
SSR1-204ENST00000474597 TBC1D22AQ8WUA7 517 aa23.4■■□□□ 1.34
SSR1-204ENST00000474597 AATFQ9NY61 560 aaKnown RBP eCLIP23.4■■□□□ 1.34
SSR1-204ENST00000474597 PRC1O43663 620 aa23.39■■□□□ 1.33
SSR1-204ENST00000474597 NOL10Q9BSC4 688 aaKnown RBP23.39■■□□□ 1.33
SSR1-204ENST00000474597 CRNKL1Q9BZJ0 848 aaKnown RBP23.39■■□□□ 1.33
SSR1-204ENST00000474597 NBPF3Q9H094 633 aa23.39■■□□□ 1.33
SSR1-204ENST00000474597 LDHCP07864 332 aa23.38■■□□□ 1.33
SSR1-204ENST00000474597 AGXT2Q9BYV1 514 aa23.38■■□□□ 1.33
SSR1-204ENST00000474597 MCM4P33991 863 aa23.38■■□□□ 1.33
SSR1-204ENST00000474597 CTDSPL2Q05D32 466 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms