RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 LEKR1Q6ZMV7 388 aa16.78■□□□□ 0.28
SAMM50-203ENST00000474323 NUTM2AQ8IVF1 878 aaPredicted RBP16.78■□□□□ 0.28
SAMM50-203ENST00000474323 TEX2Q8IWB9 1127 aa16.78■□□□□ 0.28
SAMM50-203ENST00000474323 PI4KAP1Q8N8J0 262 aa16.78■□□□□ 0.28
SAMM50-203ENST00000474323 USP28Q96RU2 1077 aa16.78■□□□□ 0.28
SAMM50-203ENST00000474323 JCADQ9P266 1359 aa16.78■□□□□ 0.28
SAMM50-203ENST00000474323 A0A1B0GUL7 405 aa16.78■□□□□ 0.28
SAMM50-203ENST00000474323 ME1P48163 572 aa16.78■□□□□ 0.28
SAMM50-203ENST00000474323 DPCR1Q3MIW9 517 aa16.78■□□□□ 0.28
SAMM50-203ENST00000474323 MRPS27Q92552 414 aaKnown RBP16.78■□□□□ 0.28
SAMM50-203ENST00000474323 PARD6BQ9BYG5 372 aa16.78■□□□□ 0.28
SAMM50-203ENST00000474323 TAF6LQ9Y6J9 622 aa16.78■□□□□ 0.28
SAMM50-203ENST00000474323 MED23Q9ULK4 1368 aa16.78■□□□□ 0.28
SAMM50-203ENST00000474323 MYH15Q9Y2K3 1946 aa16.77■□□□□ 0.28
SAMM50-203ENST00000474323 CCDC151A5D8V7 595 aa16.77■□□□□ 0.28
SAMM50-203ENST00000474323 UBAP1LF5GYI3 381 aa16.77■□□□□ 0.28
SAMM50-203ENST00000474323 RPS6KA5O75582 802 aa16.77■□□□□ 0.28
SAMM50-203ENST00000474323 A0A0D9SFI3 127 aa16.77■□□□□ 0.27
SAMM50-203ENST00000474323 GOLGA6L9A6NEM1 432 aa16.77■□□□□ 0.27
SAMM50-203ENST00000474323 MAP2K7O14733 419 aa16.77■□□□□ 0.27
SAMM50-203ENST00000474323 MAGEA9P43362 315 aa16.77■□□□□ 0.27
SAMM50-203ENST00000474323 BEND3Q5T5X7 828 aa16.77■□□□□ 0.27
SAMM50-203ENST00000474323 USPL1Q5W0Q7 1092 aa16.77■□□□□ 0.27
SAMM50-203ENST00000474323 ADALQ6DHV7 355 aa16.77■□□□□ 0.27
SAMM50-203ENST00000474323 FBXW7Q969H0 707 aa16.77■□□□□ 0.27
SAMM50-203ENST00000474323 NEK1Q96PY6 1258 aa16.77■□□□□ 0.27
SAMM50-203ENST00000474323 FTOQ9C0B1 505 aaKnown RBP eCLIP16.77■□□□□ 0.27
SAMM50-203ENST00000474323 A0A1W2PQ27 194 aa16.76■□□□□ 0.27
SAMM50-203ENST00000474323 A0A1W2PQ64 194 aa16.76■□□□□ 0.27
SAMM50-203ENST00000474323 A0A1W2PQD8 194 aa16.76■□□□□ 0.27
SAMM50-203ENST00000474323 CHRM1P11229 460 aaPredicted RBP16.76■□□□□ 0.27
SAMM50-203ENST00000474323 BRD3Q15059 726 aa16.76■□□□□ 0.27
SAMM50-203ENST00000474323 CNPY4Q8N129 248 aa16.76■□□□□ 0.27
SAMM50-203ENST00000474323 ERCC4Q92889 916 aaPredicted RBP16.76■□□□□ 0.27
SAMM50-203ENST00000474323 IKBKBO14920 756 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 GYS2P54840 703 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 FANCCQ00597 558 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 PPP2R3AQ06190 1150 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 GNL2Q13823 731 aaKnown RBP16.75■□□□□ 0.27
SAMM50-203ENST00000474323 NCAPHQ15003 741 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 LONRF2Q1L5Z9 754 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 AACSQ86V21 672 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 MSL3Q8N5Y2 521 aaKnown RBP16.75■□□□□ 0.27
SAMM50-203ENST00000474323 DNAAF4Q8WXU2 420 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 FMNL2Q96PY5 1086 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 UTP14AQ9BVJ6 771 aaKnown RBP16.75■□□□□ 0.27
SAMM50-203ENST00000474323 EPC1Q9H2F5 836 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 MRFAP1Q9Y605 127 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 KAT6BQ8WYB5 2073 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 MYL6BP14649 208 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 NLRP12P59046 1061 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 AIMP1Q12904 312 aaKnown RBP16.75■□□□□ 0.27
SAMM50-203ENST00000474323 Q6ZUG5 572 aa16.75■□□□□ 0.27
SAMM50-203ENST00000474323 VWA3AA6NCI4 1184 aa16.74■□□□□ 0.27
SAMM50-203ENST00000474323 CBFA2T2O43439 604 aa16.74■□□□□ 0.27
SAMM50-203ENST00000474323 ALDH1L1O75891 902 aa16.74■□□□□ 0.27
SAMM50-203ENST00000474323 SCRN1Q12765 414 aa16.74■□□□□ 0.27
SAMM50-203ENST00000474323 NKX1-1Q15270 411 aaPredicted RBP16.74■□□□□ 0.27
SAMM50-203ENST00000474323 GOLGA1Q92805 767 aa16.74■□□□□ 0.27
SAMM50-203ENST00000474323 DDX21Q9NR30 783 aaKnown RBP eCLIP16.74■□□□□ 0.27
SAMM50-203ENST00000474323 PCDHA7Q9UN72 937 aa16.74■□□□□ 0.27
SAMM50-203ENST00000474323 ERVV-2B6SEH9 535 aa16.74■□□□□ 0.27
SAMM50-203ENST00000474323 H3BQF6 201 aa16.74■□□□□ 0.27
SAMM50-203ENST00000474323 ARHGAP6O43182 974 aa16.74■□□□□ 0.27
SAMM50-203ENST00000474323 PFKFB2O60825 505 aa16.74■□□□□ 0.27
SAMM50-203ENST00000474323 SNRPA1P09661 255 aaKnown RBP16.74■□□□□ 0.27
SAMM50-203ENST00000474323 GUCY2CP25092 1073 aa16.74■□□□□ 0.27
SAMM50-203ENST00000474323 TXLNAP40222 546 aa16.74■□□□□ 0.27
SAMM50-203ENST00000474323 PIP4K2AP48426 406 aaPredicted RBP16.74■□□□□ 0.27
SAMM50-203ENST00000474323 PDIA6Q15084 440 aa16.74■□□□□ 0.27
SAMM50-203ENST00000474323 HNRNPLLQ8WVV9 542 aaKnown RBP16.74■□□□□ 0.27
SAMM50-203ENST00000474323 FSD1Q9BTV5 496 aa16.74■□□□□ 0.27
SAMM50-203ENST00000474323 PLCH1Q4KWH8 1693 aa16.73■□□□□ 0.27
SAMM50-203ENST00000474323 TAF5LO75529 589 aa16.73■□□□□ 0.27
SAMM50-203ENST00000474323 TTC31Q49AM3 519 aaPredicted RBP16.73■□□□□ 0.27
SAMM50-203ENST00000474323 NSUN7Q8NE18 718 aaKnown RBP16.73■□□□□ 0.27
SAMM50-203ENST00000474323 MAP3K2Q9Y2U5 619 aa16.73■□□□□ 0.27
SAMM50-203ENST00000474323 JRKLQ9Y4A0 524 aa16.73■□□□□ 0.27
SAMM50-203ENST00000474323 RTEL1Q9NZ71 1219 aa16.73■□□□□ 0.27
SAMM50-203ENST00000474323 PPP2R2CQ9Y2T4 447 aa16.73■□□□□ 0.27
SAMM50-203ENST00000474323 SLC3A2P08195 630 aaKnown RBP16.72■□□□□ 0.27
SAMM50-203ENST00000474323 ZBTB9Q96C00 473 aa16.72■□□□□ 0.27
SAMM50-203ENST00000474323 HDAC5Q9UQL6 1122 aa16.72■□□□□ 0.27
SAMM50-203ENST00000474323 A0A1B0GVL5 298 aa16.72■□□□□ 0.27
SAMM50-203ENST00000474323 NDUFA8P51970 172 aa16.72■□□□□ 0.27
SAMM50-203ENST00000474323 UBASH3AP57075 661 aa16.72■□□□□ 0.27
SAMM50-203ENST00000474323 GNG11P61952 73 aa16.72■□□□□ 0.27
SAMM50-203ENST00000474323 APOBRQ0VD83 1088 aa16.72■□□□□ 0.27
SAMM50-203ENST00000474323 ZNF589Q86UQ0 364 aaPredicted RBP16.72■□□□□ 0.27
SAMM50-203ENST00000474323 MKRN1Q9UHC7 482 aaKnown RBP16.72■□□□□ 0.27
SAMM50-203ENST00000474323 LMOD1P29536 600 aaPredicted RBP16.71■□□□□ 0.27
SAMM50-203ENST00000474323 KSR2Q6VAB6 950 aa16.71■□□□□ 0.27
SAMM50-203ENST00000474323 TOGARAM1Q9Y4F4 1720 aa16.71■□□□□ 0.27
SAMM50-203ENST00000474323 PTCD1O75127 700 aaKnown RBP16.71■□□□□ 0.26
SAMM50-203ENST00000474323 NCAPGQ9BPX3 1015 aa16.71■□□□□ 0.26
SAMM50-203ENST00000474323 NEDD4P46934 1319 aa16.71■□□□□ 0.26
SAMM50-203ENST00000474323 DISP2A7MBM2 1401 aa16.71■□□□□ 0.26
SAMM50-203ENST00000474323 PTPDC1A2A3K4 754 aa16.7■□□□□ 0.26
SAMM50-203ENST00000474323 MYO1BO43795 1136 aa16.7■□□□□ 0.26
SAMM50-203ENST00000474323 HDXQ7Z353 690 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms