RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 FILIP1Q7Z7B0 1213 aa12.77□□□□□ -0.37
C9orf3-214ENST00000473778 TICAM2Q86XR7 235 aa12.77□□□□□ -0.37
C9orf3-214ENST00000473778 ASAP1Q9ULH1 1129 aa12.77□□□□□ -0.37
C9orf3-214ENST00000473778 ECM29Q5VYK3 1845 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 CSF1RP07333 972 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 RXRAP19793 462 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 HLFQ16534 295 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 GORABQ5T7V8 394 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 DNAJC10Q8IXB1 793 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 APPBP2Q92624 585 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 C8orf76Q96K31 380 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 ORC3Q9UBD5 711 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-214ENST00000473778 MROH7-TTC4A0A0A0MT08 1334 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 UBE2Q2LH0YL09 131 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 IL2RBP14784 551 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 CHAF1AQ13111 956 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-214ENST00000473778 AXDND1Q5T1B0 1012 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-214ENST00000473778 MYSM1Q5VVJ2 828 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 TBC1D10CQ8IV04 446 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 GREM2Q9H772 168 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 ANO10Q9NW15 660 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 RIPOR2Q9Y4F9 1068 aa12.76□□□□□ -0.37
C9orf3-214ENST00000473778 BECN2A8MW95 431 aa12.75□□□□□ -0.37
C9orf3-214ENST00000473778 WDHD1O75717 1129 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-214ENST00000473778 RBM6P78332 1123 aaKnown RBP12.75□□□□□ -0.37
C9orf3-214ENST00000473778 CBX1P83916 185 aa12.75□□□□□ -0.37
C9orf3-214ENST00000473778 CYB5R4Q7L1T6 521 aa12.75□□□□□ -0.37
C9orf3-214ENST00000473778 INCENPQ9NQS7 918 aa12.75□□□□□ -0.37
C9orf3-214ENST00000473778 POLR3EQ9NVU0 708 aa12.75□□□□□ -0.37
C9orf3-214ENST00000473778 A0A1W2PQ27 194 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 A0A1W2PQ64 194 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 A0A1W2PQD8 194 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 CCDC69A6NI79 296 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 BIN1O00499 593 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 PCCAP05165 728 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-214ENST00000473778 GPTP24298 496 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 SDF4Q9BRK5 362 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 STRN4Q9NRL3 753 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 KIAA1468Q9P260 1216 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 SKILP12757 684 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 ZSCAN20P17040 1043 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-214ENST00000473778 U2AF2P26368 475 aaKnown RBP eCLIP12.74□□□□□ -0.37
C9orf3-214ENST00000473778 KIF23Q02241 960 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-214ENST00000473778 IFIT5Q13325 482 aaKnown RBP12.74□□□□□ -0.37
C9orf3-214ENST00000473778 STK38Q15208 465 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 TPD52L1Q16890 204 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-214ENST00000473778 VGLL2Q8N8G2 317 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 ZBTB38Q8NAP3 1195 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-214ENST00000473778 NCOA7Q8NI08 942 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 PLA2G12BQ9BX93 195 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 PIH1D3Q9NQM4 214 aaKnown RBP12.74□□□□□ -0.37
C9orf3-214ENST00000473778 CTNNA3Q9UI47 895 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 TAOK2Q9UL54 1235 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 AKAP2Q9Y2D5 859 aa12.74□□□□□ -0.37
C9orf3-214ENST00000473778 SPDYE4A6NLX3 237 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 SMTNL1A8MU46 457 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 SPTLC2O15270 562 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 ZFYP08048 801 aaPredicted RBP12.73□□□□□ -0.37
C9orf3-214ENST00000473778 ITGA6P23229 1130 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 DSG3P32926 999 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 TRIM28Q13263 835 aaKnown RBP12.73□□□□□ -0.37
C9orf3-214ENST00000473778 NYAP1Q6ZVC0 841 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 CEP57L1Q8IYX8 460 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 PDCL2Q8N4E4 241 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 TTLL11Q8NHH1 800 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 ABCA3Q99758 1704 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 MYH3P11055 1940 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 ZNF213O14771 459 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 ZNF202O95125 648 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 MARCKSP29966 332 aaPredicted RBP12.73□□□□□ -0.37
C9orf3-214ENST00000473778 CDC27P30260 824 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 ADD2P35612 726 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 ISM2Q6H9L7 571 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 PIGBQ92521 554 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 SLC4A9Q96Q91 983 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 HSD3B7Q9H2F3 369 aa12.73□□□□□ -0.37
C9orf3-214ENST00000473778 TRMT1Q9NXH9 659 aaKnown RBP12.73□□□□□ -0.37
C9orf3-214ENST00000473778 YEATS4O95619 227 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 NCAPHQ15003 741 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 TAF7LQ5H9L4 462 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 METTL24Q5JXM2 366 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 SLC9C2Q5TAH2 1124 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 PHKBQ93100 1093 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 CARD10Q9BWT7 1032 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 TACC3Q9Y6A5 838 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 KAT6BQ8WYB5 2073 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 ITGB4P16144 1822 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 SNAP23O00161 211 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 PFKFB1P16118 471 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 ANO1Q5XXA6 986 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 LDHAL6AQ6ZMR3 332 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 KCNG4Q8TDN1 519 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 ZNF592Q92610 1267 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 MYL10Q9BUA6 226 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 XPO4Q9C0E2 1151 aaKnown RBP12.72□□□□□ -0.37
C9orf3-214ENST00000473778 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 WWC3Q9ULE0 1092 aa12.72□□□□□ -0.37
C9orf3-214ENST00000473778 B4E1Z4 1266 aa12.71□□□□□ -0.37
C9orf3-214ENST00000473778 CPLX1O14810 134 aa12.71□□□□□ -0.37
C9orf3-214ENST00000473778 PHKA1P46020 1223 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms