RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 TTF1Q15361 905 aaPredicted RBP7.04□□□□□ -1.28
HERC4-209ENST00000473533 TTC39AQ5SRH9 613 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 CCDC129Q6ZRS4 1044 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 STOX1Q6ZVD7 989 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 NBPF11Q86T75 865 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 VSTM4Q8IW00 320 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 MLKLQ8NB16 471 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 CCDC191Q8NCU4 936 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 PODXL2Q9NZ53 605 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 ZMYM6O95789 1325 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 KLF18A0A0U1RQI7 1052 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 H7C1W4 665 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 ZNF213O14771 459 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 PFKFB1P16118 471 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 PIP4K2AP48426 406 aaPredicted RBP7.04□□□□□ -1.28
HERC4-209ENST00000473533 SLC20A2Q08357 652 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 DPCR1Q3MIW9 517 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 ARMCX5Q6P1M9 558 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 LMBR1LQ6UX01 489 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 APPBP2Q92624 585 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 RABGGTAQ92696 567 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 TMEM87BQ96K49 555 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 ARFGAP3Q9NP61 516 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 TAF6LQ9Y6J9 622 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 RGPD2P0DJD1 1756 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 ARFGEF2Q9Y6D5 1785 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 MAST3O60307 1309 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 URI1O94763 535 aaPredicted RBP7.04□□□□□ -1.28
HERC4-209ENST00000473533 KIF23Q02241 960 aaPredicted RBP7.04□□□□□ -1.28
HERC4-209ENST00000473533 BRD3Q15059 726 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 GOLGA1Q92805 767 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 STK36Q9NRP7 1315 aa7.04□□□□□ -1.28
HERC4-209ENST00000473533 CPDO75976 1380 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 PNMA6AP0CW24 399 aaPredicted RBP7.03□□□□□ -1.28
HERC4-209ENST00000473533 PHKG2P15735 406 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 CYP2C19P33261 490 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 CLCN6P51797 869 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 ERCC6LQ2NKX8 1250 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 EPHA10Q5JZY3 1008 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 MSL3Q8N5Y2 521 aaKnown RBP7.03□□□□□ -1.28
HERC4-209ENST00000473533 CEP112Q8N8E3 955 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 LRRC2Q9BYS8 371 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.03□□□□□ -1.28
HERC4-209ENST00000473533 ERBB3P21860 1342 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 C5P01031 1676 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 ARID5BQ14865 1188 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 WASHC4Q2M389 1173 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 KLHDC4Q8TBB5 520 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 ERCC4Q92889 916 aaPredicted RBP7.03□□□□□ -1.28
HERC4-209ENST00000473533 EDC3Q96F86 508 aaKnown RBP7.03□□□□□ -1.28
HERC4-209ENST00000473533 CTAGE1Q96RT6 745 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 PYM1Q9BRP8 204 aaKnown RBP7.03□□□□□ -1.28
HERC4-209ENST00000473533 TMX1Q9H3N1 280 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 C19orf44Q9H6X5 657 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 IQSEC3Q9UPP2 1182 aaPredicted RBP7.03□□□□□ -1.28
HERC4-209ENST00000473533 TADA3O75528 432 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 FOSBP53539 338 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 FILIP1LQ4L180 1135 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 NUTM2AQ8IVF1 878 aaPredicted RBP7.03□□□□□ -1.28
HERC4-209ENST00000473533 CNNM3Q8NE01 707 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 SMARCE1Q969G3 411 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 SEC62Q99442 399 aaKnown RBP7.03□□□□□ -1.28
HERC4-209ENST00000473533 BAG1Q99933 345 aaPredicted RBP7.03□□□□□ -1.28
HERC4-209ENST00000473533 MTA3Q9BTC8 594 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 PSD3Q9NYI0 1048 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 ANGEL1Q9UNK9 670 aaKnown RBP7.03□□□□□ -1.28
HERC4-209ENST00000473533 HPSEQ9Y251 543 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 CLIC4Q9Y696 253 aa7.03□□□□□ -1.28
HERC4-209ENST00000473533 BMP15O95972 392 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 MCM3P25205 808 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 LMOD1P29536 600 aaPredicted RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 METAP2P50579 478 aaKnown RBP eCLIP7.02□□□□□ -1.29
HERC4-209ENST00000473533 GUCY1B3Q02153 619 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 NCAPHQ15003 741 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 CCDC57Q2TAC2 916 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 MUM1L1Q5H9M0 696 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 RESP18Q5W5W9 173 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 ILDR1Q86SU0 546 aaPredicted RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 MB21D2Q8IYB1 491 aaPredicted RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 CCDC51Q96ER9 411 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 ALG1Q9BT22 464 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 PARP4Q9UKK3 1724 aaKnown RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 CCDC196A0A1B0GTZ2 297 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 CCDC151A5D8V7 595 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 ZRANB2O95218 330 aaKnown RBP eCLIP7.02□□□□□ -1.293e-7■■■■□ 26
HERC4-209ENST00000473533 FDPSP14324 419 aaKnown RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 CASP7P55210 303 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 CABP4P57796 275 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 AXDND1Q5T1B0 1012 aaPredicted RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 SPECC1LQ69YQ0 1117 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 KRI1Q8N9T8 703 aaKnown RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 CNNM2Q9H8M5 875 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 NCOA5Q9HCD5 579 aaKnown RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 TBC1D2BQ9UPU7 963 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 PPP2R2CQ9Y2T4 447 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 FHOD1Q9Y613 1164 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 A0A1B0GUL7 405 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 POLR3DP05423 398 aaPredicted RBP7.02□□□□□ -1.29
HERC4-209ENST00000473533 IVLP07476 585 aa7.02□□□□□ -1.29
HERC4-209ENST00000473533 CCDC175P0C221 793 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms