RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 USP48Q86UV5 1035 aa7.51□□□□□ -1.21
RTF1-203ENST00000473214 CREBRFQ8IUR6 639 aa7.51□□□□□ -1.21
RTF1-203ENST00000473214 TMC1Q8TDI8 760 aa7.51□□□□□ -1.21
RTF1-203ENST00000473214 C12orf49Q9H741 205 aa7.51□□□□□ -1.21
RTF1-203ENST00000473214 CASS4Q9NQ75 786 aa7.51□□□□□ -1.21
RTF1-203ENST00000473214 AVENQ9NQS1 362 aaPredicted RBP7.51□□□□□ -1.21
RTF1-203ENST00000473214 ANAPC4Q9UJX5 808 aa7.51□□□□□ -1.21
RTF1-203ENST00000473214 NOS2P35228 1153 aa7.5□□□□□ -1.21
RTF1-203ENST00000473214 TLR1Q15399 786 aa7.5□□□□□ -1.21
RTF1-203ENST00000473214 ZMYM1Q5SVZ6 1142 aa7.5□□□□□ -1.21
RTF1-203ENST00000473214 CCDC174Q6PII3 467 aa7.5□□□□□ -1.21
RTF1-203ENST00000473214 FIGNL1Q6PIW4 674 aa7.5□□□□□ -1.21
RTF1-203ENST00000473214 GET4Q7L5D6 327 aaPredicted RBP7.5□□□□□ -1.21
RTF1-203ENST00000473214 OGFOD1Q8N543 542 aa7.5□□□□□ -1.21
RTF1-203ENST00000473214 MKNK1Q9BUB5 465 aa7.5□□□□□ -1.21
RTF1-203ENST00000473214 ZCCHC2Q9C0B9 1178 aaKnown RBP7.5□□□□□ -1.21
RTF1-203ENST00000473214 NOP53Q9NZM5 478 aaKnown RBP7.5□□□□□ -1.21
RTF1-203ENST00000473214 CHIC2Q9UKJ5 165 aa7.5□□□□□ -1.21
RTF1-203ENST00000473214 DOLKQ9UPQ8 538 aa7.5□□□□□ -1.21
RTF1-203ENST00000473214 FRMD4BQ9Y2L6 1034 aa7.5□□□□□ -1.21
RTF1-203ENST00000473214 RUSC2Q8N2Y8 1516 aa7.5□□□□□ -1.21
RTF1-203ENST00000473214 BPNT1O95861 308 aa7.49□□□□□ -1.21
RTF1-203ENST00000473214 MYL1P05976 194 aa7.49□□□□□ -1.21
RTF1-203ENST00000473214 HCLS1P14317 486 aaPredicted RBP7.49□□□□□ -1.21
RTF1-203ENST00000473214 ATP4AP20648 1035 aa7.49□□□□□ -1.21
RTF1-203ENST00000473214 ATP2B2Q01814 1243 aa7.49□□□□□ -1.21
RTF1-203ENST00000473214 PLCB3Q01970 1234 aa7.49□□□□□ -1.21
RTF1-203ENST00000473214 CNGB1Q14028 1251 aaPredicted RBP7.49□□□□□ -1.21
RTF1-203ENST00000473214 MAPRE1Q15691 268 aaKnown RBP7.49□□□□□ -1.21
RTF1-203ENST00000473214 NLRP8Q86W28 1048 aa7.49□□□□□ -1.21
RTF1-203ENST00000473214 IPO4Q8TEX9 1081 aaKnown RBP7.49□□□□□ -1.21
RTF1-203ENST00000473214 SLC39A13Q96H72 371 aa7.49□□□□□ -1.21
RTF1-203ENST00000473214 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.49□□□□□ -1.21
RTF1-203ENST00000473214 HCN2Q9UL51 889 aa7.49□□□□□ -1.21
RTF1-203ENST00000473214 PCDHGC4Q9Y5F7 938 aa7.49□□□□□ -1.21
RTF1-203ENST00000473214 RPGRIP1LQ68CZ1 1315 aa7.49□□□□□ -1.21
RTF1-203ENST00000473214 NEURL1BA8MQ27 555 aa7.48□□□□□ -1.21
RTF1-203ENST00000473214 TCERG1O14776 1098 aaKnown RBP7.48□□□□□ -1.21
RTF1-203ENST00000473214 NDUFB5O43674 189 aa7.48□□□□□ -1.21
RTF1-203ENST00000473214 ATF4P18848 351 aaPredicted RBP7.48□□□□□ -1.21
RTF1-203ENST00000473214 PLA2G4AP47712 749 aa7.48□□□□□ -1.21
RTF1-203ENST00000473214 SCNN1DP51172 638 aa7.48□□□□□ -1.21
RTF1-203ENST00000473214 RAPGEF1Q13905 1077 aa7.48□□□□□ -1.21
RTF1-203ENST00000473214 ARSHQ5FYA8 562 aa7.48□□□□□ -1.21
RTF1-203ENST00000473214 APPBP2Q92624 585 aa7.48□□□□□ -1.21
RTF1-203ENST00000473214 RUNDC1Q96C34 613 aa7.48□□□□□ -1.21
RTF1-203ENST00000473214 ARNT2Q9HBZ2 717 aa7.48□□□□□ -1.21
RTF1-203ENST00000473214 KLF15Q9UIH9 416 aa7.48□□□□□ -1.21
RTF1-203ENST00000473214 FHAD1B1AJZ9 1412 aa7.47□□□□□ -1.21
RTF1-203ENST00000473214 TIMM44O43615 452 aa7.47□□□□□ -1.21
RTF1-203ENST00000473214 TSPAN6O43657 245 aa7.47□□□□□ -1.21
RTF1-203ENST00000473214 INHAP05111 366 aa7.47□□□□□ -1.21
RTF1-203ENST00000473214 EXOSC10Q01780 885 aaKnown RBP7.47□□□□□ -1.21
RTF1-203ENST00000473214 FAM182BQ5T319 152 aa7.47□□□□□ -1.21
RTF1-203ENST00000473214 DRC7Q8IY82 874 aa7.47□□□□□ -1.21
RTF1-203ENST00000473214 SH3TC2Q8TF17 1288 aa7.47□□□□□ -1.21
RTF1-203ENST00000473214 NEUROD6Q96NK8 337 aa7.47□□□□□ -1.21
RTF1-203ENST00000473214 NEUROD4Q9HD90 331 aa7.47□□□□□ -1.21
RTF1-203ENST00000473214 CHST12Q9NRB3 414 aa7.47□□□□□ -1.21
RTF1-203ENST00000473214 SIRPGQ9P1W8 387 aa7.47□□□□□ -1.21
RTF1-203ENST00000473214 LZTS1Q9Y250 596 aa7.47□□□□□ -1.21
RTF1-203ENST00000473214 ATXN7O15265 892 aaPredicted RBP7.46□□□□□ -1.22
RTF1-203ENST00000473214 LDHCP07864 332 aa7.46□□□□□ -1.22
RTF1-203ENST00000473214 MASP1P48740 699 aa7.46□□□□□ -1.22
RTF1-203ENST00000473214 EHHADHQ08426 723 aa7.46□□□□□ -1.22
RTF1-203ENST00000473214 BRDTQ58F21 947 aaPredicted RBP7.46□□□□□ -1.22
RTF1-203ENST00000473214 C10orf62Q5T681 223 aaPredicted RBP7.46□□□□□ -1.22
RTF1-203ENST00000473214 CHSY3Q70JA7 882 aa7.46□□□□□ -1.22
RTF1-203ENST00000473214 ZNF295-AS1Q8N0V1 137 aa7.46□□□□□ -1.22
RTF1-203ENST00000473214 TRIM55Q9BYV6 548 aa7.46□□□□□ -1.22
RTF1-203ENST00000473214 SNTG2Q9NY99 539 aa7.46□□□□□ -1.22
RTF1-203ENST00000473214 NOD1Q9Y239 953 aa7.46□□□□□ -1.22
RTF1-203ENST00000473214 SSBP05455 408 aaKnown RBP eCLIP7.45□□□□□ -1.22
RTF1-203ENST00000473214 MAPTP10636 758 aaKnown RBP7.45□□□□□ -1.22
RTF1-203ENST00000473214 COL6A1P12109 1028 aa7.45□□□□□ -1.22
RTF1-203ENST00000473214 ADH6P28332 368 aa7.45□□□□□ -1.22
RTF1-203ENST00000473214 POLD1P28340 1107 aa7.45□□□□□ -1.22
RTF1-203ENST00000473214 CDC27P30260 824 aa7.45□□□□□ -1.22
RTF1-203ENST00000473214 GATA4P43694 442 aa7.45□□□□□ -1.22
RTF1-203ENST00000473214 GDF10P55107 478 aa7.45□□□□□ -1.22
RTF1-203ENST00000473214 CLDN10P78369 228 aa7.45□□□□□ -1.22
RTF1-203ENST00000473214 TNP2Q05952 138 aa7.45□□□□□ -1.22
RTF1-203ENST00000473214 DSC3Q14574 896 aa7.45□□□□□ -1.22
RTF1-203ENST00000473214 FTSJ3Q8IY81 847 aaKnown RBP7.45□□□□□ -1.22
RTF1-203ENST00000473214 SVIPQ8NHG7 77 aa7.45□□□□□ -1.22
RTF1-203ENST00000473214 ENOX1Q8TC92 643 aaKnown RBP7.45□□□□□ -1.22
RTF1-203ENST00000473214 DEPDC7Q96QD5 511 aa7.45□□□□□ -1.22
RTF1-203ENST00000473214 SETDB2Q96T68 719 aa7.45□□□□□ -1.22
RTF1-203ENST00000473214 CDC5LQ99459 802 aaKnown RBP7.45□□□□□ -1.22
RTF1-203ENST00000473214 NIFKQ9BYG3 293 aaKnown RBP7.45□□□□□ -1.22
RTF1-203ENST00000473214 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.45□□□□□ -1.22
RTF1-203ENST00000473214 KANSL2Q9H9L4 492 aa7.45□□□□□ -1.22
RTF1-203ENST00000473214 SRA1Q9HD15 236 aaKnown RBP7.45□□□□□ -1.22
RTF1-203ENST00000473214 INTUQ9ULD6 942 aa7.45□□□□□ -1.22
RTF1-203ENST00000473214 ESYT3A0FGR9 886 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 TBX3O15119 743 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 VDRP11473 427 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 ATF3P18847 181 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 GJA8P48165 433 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 TRAPPC10P48553 1259 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms