RNA–Protein interactions for RNA: ENST00000472749.6

ZIC4-208, Transcript of Zic family member 4, human

TSL 2

Gene ZIC4, Length 3,550 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZIC4-208	ENST00000472749	REXO1L1P	Q8IX06	675 aa		11.22	□□□□□ -0.61
ZIC4-208	ENST00000472749	FSIP1	Q8NA03	581 aa		11.22	□□□□□ -0.61
ZIC4-208	ENST00000472749	GIMAP7	Q8NHV1	300 aa		11.22	□□□□□ -0.61
ZIC4-208	ENST00000472749	METTL22	Q9BUU2	404 aa	Predicted RBP	11.22	□□□□□ -0.61
ZIC4-208	ENST00000472749	SLC52A2	Q9HAB3	445 aa		11.22	□□□□□ -0.61
ZIC4-208	ENST00000472749	RAI14	Q9P0K7	980 aa		11.22	□□□□□ -0.61
ZIC4-208	ENST00000472749	RGPD8	O14715	1765 aa	Predicted RBP	11.22	□□□□□ -0.61
ZIC4-208	ENST00000472749	CEMIP	Q8WUJ3	1361 aa		11.21	□□□□□ -0.61
ZIC4-208	ENST00000472749	SASH3	O75995	380 aa		11.21	□□□□□ -0.61
ZIC4-208	ENST00000472749	MARCKS	P29966	332 aa	Predicted RBP	11.21	□□□□□ -0.61
ZIC4-208	ENST00000472749	TM6SF1	Q9BZW5	370 aa		11.21	□□□□□ -0.61
ZIC4-208	ENST00000472749	MED4	Q9NPJ6	270 aa		11.21	□□□□□ -0.61
ZIC4-208	ENST00000472749	PAG1	Q9NWQ8	432 aa		11.21	□□□□□ -0.61
ZIC4-208	ENST00000472749	DNAI1	Q9UI46	699 aa		11.21	□□□□□ -0.61
ZIC4-208	ENST00000472749	ERBB3	P21860	1342 aa		11.21	□□□□□ -0.61
ZIC4-208	ENST00000472749	PTPN21	Q16825	1174 aa		11.21	□□□□□ -0.62
ZIC4-208	ENST00000472749	METTL24	Q5JXM2	366 aa		11.21	□□□□□ -0.62
ZIC4-208	ENST00000472749		A0A1B0GVL5	298 aa		11.21	□□□□□ -0.62
ZIC4-208	ENST00000472749	LIG3	P49916	1009 aa		11.21	□□□□□ -0.62
ZIC4-208	ENST00000472749	MTX1	Q13505	466 aa		11.21	□□□□□ -0.62
ZIC4-208	ENST00000472749	SLC4A8	Q2Y0W8	1093 aa		11.21	□□□□□ -0.62
ZIC4-208	ENST00000472749	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.21	□□□□□ -0.62
ZIC4-208	ENST00000472749	PTPDC1	A2A3K4	754 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	GOLGA8B	A8MQT2	603 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	KIF2A	O00139	706 aa	Predicted RBP	11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	CYP21A2	P08686	494 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	LEO1	Q8WVC0	666 aa	Predicted RBP	11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	FUCA2	Q9BTY2	467 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	CARD6	Q9BX69	1037 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	CWC25	Q9NXE8	425 aa	Predicted RBP	11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	MRVI1	Q9Y6F6	885 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	RGPD1	P0DJD0	1748 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749		H0YHG0	523 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	SARNP	P82979	210 aa	Known RBP	11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	KRT32	Q14532	448 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	MICU3	Q86XE3	530 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	IL17RA	Q96F46	866 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	ZSWIM4	Q9H7M6	989 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	CFAP45	Q9UL16	551 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	TAF5L	O75529	589 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	PDE6B	P35913	854 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	SYNE4	Q8N205	404 aa		11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	JPH2	Q9BR39	696 aa	Predicted RBP	11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749		U3KPZ7	1027 aa	Predicted RBP	11.2	□□□□□ -0.62
ZIC4-208	ENST00000472749	TPM1	P09493	284 aa		11.19	□□□□□ -0.62
ZIC4-208	ENST00000472749	NYAP1	Q6ZVC0	841 aa		11.19	□□□□□ -0.62
ZIC4-208	ENST00000472749	PLCD4	Q9BRC7	762 aa		11.19	□□□□□ -0.62
ZIC4-208	ENST00000472749	ARFGAP3	Q9NP61	516 aa		11.19	□□□□□ -0.62
ZIC4-208	ENST00000472749	ORC3	Q9UBD5	711 aa	Predicted RBP	11.19	□□□□□ -0.62
ZIC4-208	ENST00000472749	SH3BP1	Q9Y3L3	701 aa		11.19	□□□□□ -0.62
ZIC4-208	ENST00000472749	KLF18	A0A0U1RQI7	1052 aa		11.19	□□□□□ -0.62
ZIC4-208	ENST00000472749	EVC	P57679	992 aa		11.19	□□□□□ -0.62
ZIC4-208	ENST00000472749	TOB2	Q14106	344 aa	Predicted RBP	11.19	□□□□□ -0.62
ZIC4-208	ENST00000472749	NUP133	Q8WUM0	1156 aa		11.19	□□□□□ -0.62
ZIC4-208	ENST00000472749	EXOC4	Q96A65	974 aa		11.19	□□□□□ -0.62
ZIC4-208	ENST00000472749	NPHP3	Q7Z494	1330 aa		11.19	□□□□□ -0.62
ZIC4-208	ENST00000472749	DIP2A	Q14689	1571 aa		11.19	□□□□□ -0.62
ZIC4-208	ENST00000472749	CCDC189	A1A4V9	331 aa		11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	PHKG2	P15735	406 aa		11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	LDHAL6A	Q6ZMR3	332 aa		11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	C8orf76	Q96K31	380 aa		11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	MYL10	Q9BUA6	226 aa		11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	TBC1D2B	Q9UPU7	963 aa		11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	USP42	Q9H9J4	1324 aa	Known RBP	11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	MPHOSPH10	O00566	681 aa	Known RBP	11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	PDILT	Q8N807	584 aa		11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	TBC1D8	O95759	1140 aa		11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	ADORA1	P30542	326 aa		11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	PTPN12	Q05209	780 aa	Known RBP	11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	NAIF1	Q69YI7	327 aa	Predicted RBP	11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	CEP120	Q8N960	986 aa		11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	RABEP2	Q9H5N1	569 aa		11.18	□□□□□ -0.62
ZIC4-208	ENST00000472749	SNAP23	O00161	211 aa		11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	SCRN1	Q12765	414 aa		11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	FBXW10	Q5XX13	1052 aa		11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	GBP6	Q6ZN66	633 aa		11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	PXDNL	A1KZ92	1463 aa		11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	GSC	P56915	257 aa	Predicted RBP	11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	KIF6	Q6ZMV9	814 aa		11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	AOPEP	Q8N6M6	819 aa		11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	CCDC102A	Q96A19	550 aa		11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	UBR1	Q8IWV7	1749 aa		11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	XRN1	Q8IZH2	1706 aa	Known RBP	11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749		H3BQF6	201 aa		11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	PPP1R12A	O14974	1030 aa	Predicted RBP	11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	CALR	P27797	417 aa	Known RBP	11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	IFIT5	Q13325	482 aa	Known RBP	11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	IMMT	Q16891	758 aa	Known RBP	11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	ZKSCAN3	Q9BRR0	538 aa		11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	ABCF2	Q9UG63	623 aa		11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	PIK3C2A	O00443	1686 aa		11.17	□□□□□ -0.62
ZIC4-208	ENST00000472749	CYP27B1	O15528	508 aa		11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	ERLIN2	O94905	339 aa		11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	SET	Q01105	290 aa	Predicted RBP	11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	TRIM29	Q14134	588 aa		11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	SPECC1	Q5M775	1068 aa		11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	PGBD1	Q96JS3	809 aa		11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	ZNF396	Q96N95	335 aa	Predicted RBP	11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	PDE11A	Q9HCR9	933 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms