RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 A0A1B0GUL6 1792 aa12.71□□□□□ -0.37
UBE2F-220ENST00000472479 MAST3O60307 1309 aa12.71□□□□□ -0.37
UBE2F-220ENST00000472479 RNF113AO15541 343 aaKnown RBP12.71□□□□□ -0.38
UBE2F-220ENST00000472479 ZFYP08048 801 aaPredicted RBP12.71□□□□□ -0.38
UBE2F-220ENST00000472479 LMOD1P29536 600 aaPredicted RBP12.71□□□□□ -0.38
UBE2F-220ENST00000472479 PRDX5P30044 214 aa12.71□□□□□ -0.38
UBE2F-220ENST00000472479 DACT2Q5SW24 774 aa12.71□□□□□ -0.38
UBE2F-220ENST00000472479 RUFY2Q8WXA3 655 aa12.71□□□□□ -0.38
UBE2F-220ENST00000472479 SUGT1Q9Y2Z0 365 aa12.71□□□□□ -0.38
UBE2F-220ENST00000472479 FER1L6Q2WGJ9 1857 aa12.7□□□□□ -0.38
UBE2F-220ENST00000472479 SALL1Q9NSC2 1324 aa12.7□□□□□ -0.38
UBE2F-220ENST00000472479 H7C1D1 291 aa12.7□□□□□ -0.38
UBE2F-220ENST00000472479 CDC45O75419 566 aa12.7□□□□□ -0.38
UBE2F-220ENST00000472479 VIL1P09327 827 aaKnown RBP12.7□□□□□ -0.38
UBE2F-220ENST00000472479 SCNN1DP51172 638 aa12.7□□□□□ -0.38
UBE2F-220ENST00000472479 FKBP1AP62942 108 aaKnown RBP12.7□□□□□ -0.38
UBE2F-220ENST00000472479 RBM26Q5T8P6 1007 aaKnown RBP12.7□□□□□ -0.38
UBE2F-220ENST00000472479 LTBP1Q14766 1721 aa12.7□□□□□ -0.38
UBE2F-220ENST00000472479 DDNO94850 711 aaPredicted RBP12.69□□□□□ -0.38
UBE2F-220ENST00000472479 USP17L8P0C7I0 530 aa12.69□□□□□ -0.38
UBE2F-220ENST00000472479 RPS12P25398 132 aaKnown RBP12.69□□□□□ -0.38
UBE2F-220ENST00000472479 MECOMQ03112 1051 aa12.69□□□□□ -0.38
UBE2F-220ENST00000472479 GPC2Q8N158 579 aa12.69□□□□□ -0.38
UBE2F-220ENST00000472479 AGBL3Q8NEM8 1001 aa12.69□□□□□ -0.38
UBE2F-220ENST00000472479 TEKT1Q969V4 418 aa12.69□□□□□ -0.38
UBE2F-220ENST00000472479 ZNF541Q9H0D2 1346 aa12.68□□□□□ -0.38
UBE2F-220ENST00000472479 ZNF532Q9HCE3 1301 aa12.68□□□□□ -0.38
UBE2F-220ENST00000472479 ARAP2Q8WZ64 1704 aa12.68□□□□□ -0.38
UBE2F-220ENST00000472479 BAG3O95817 575 aa12.68□□□□□ -0.38
UBE2F-220ENST00000472479 PDE6AP16499 860 aa12.68□□□□□ -0.38
UBE2F-220ENST00000472479 GMPSP49915 693 aaPredicted RBP12.68□□□□□ -0.38
UBE2F-220ENST00000472479 CWC27Q6UX04 472 aaKnown RBP12.68□□□□□ -0.38
UBE2F-220ENST00000472479 CERS5Q8N5B7 392 aa12.68□□□□□ -0.38
UBE2F-220ENST00000472479 CNOT7Q9UIV1 285 aaKnown RBP12.68□□□□□ -0.38
UBE2F-220ENST00000472479 IGSF3O75054 1194 aa12.67□□□□□ -0.38
UBE2F-220ENST00000472479 ADD2P35612 726 aa12.67□□□□□ -0.38
UBE2F-220ENST00000472479 DLGAP5Q15398 846 aa12.67□□□□□ -0.38
UBE2F-220ENST00000472479 DIXDC1Q155Q3 683 aa12.67□□□□□ -0.38
UBE2F-220ENST00000472479 GRIK5Q16478 980 aa12.67□□□□□ -0.38
UBE2F-220ENST00000472479 KIAA1211Q6ZU35 1233 aa12.67□□□□□ -0.38
UBE2F-220ENST00000472479 AIDAQ96BJ3 306 aa12.67□□□□□ -0.38
UBE2F-220ENST00000472479 NSUN4Q96CB9 384 aaKnown RBP12.67□□□□□ -0.38
UBE2F-220ENST00000472479 COL1A1P02452 1464 aaPredicted RBP12.67□□□□□ -0.38
UBE2F-220ENST00000472479 MAGEB6P1A0A0J9YX57 407 aa12.66□□□□□ -0.38
UBE2F-220ENST00000472479 APPP05067 770 aa12.66□□□□□ -0.38
UBE2F-220ENST00000472479 CHMLP26374 656 aa12.66□□□□□ -0.38
UBE2F-220ENST00000472479 CRKP46108 304 aa12.66□□□□□ -0.38
UBE2F-220ENST00000472479 MFAP1P55081 439 aaKnown RBP12.66□□□□□ -0.38
UBE2F-220ENST00000472479 NMIQ13287 307 aaPredicted RBP12.66□□□□□ -0.38
UBE2F-220ENST00000472479 UBE3CQ15386 1083 aa12.66□□□□□ -0.38
UBE2F-220ENST00000472479 CFAP100Q494V2 611 aa12.66□□□□□ -0.38
UBE2F-220ENST00000472479 MIGA1Q8NAN2 632 aa12.66□□□□□ -0.38
UBE2F-220ENST00000472479 APPBP2Q92624 585 aa12.66□□□□□ -0.38
UBE2F-220ENST00000472479 DPF2Q92785 391 aa12.66□□□□□ -0.38
UBE2F-220ENST00000472479 GLTPD2A6NH11 291 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 MYO1BO43795 1136 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 EIF5BO60841 1220 aaKnown RBP12.65□□□□□ -0.38
UBE2F-220ENST00000472479 SLFNL1Q499Z3 407 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 MCMDC2Q4G0Z9 681 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 TICAM2Q86XR7 235 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 ZNF526Q8TF50 670 aaPredicted RBP12.65□□□□□ -0.38
UBE2F-220ENST00000472479 HELLSQ9NRZ9 838 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 AATFQ9NY61 560 aaKnown RBP eCLIP12.65□□□□□ -0.38
UBE2F-220ENST00000472479 COL4A5P29400 1685 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 CHD4Q14839 1912 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 ZC3H4Q9UPT8 1303 aaKnown RBP12.65□□□□□ -0.38
UBE2F-220ENST00000472479 SRCAPQ6ZRS2 3230 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 BTDP43251 543 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 MMP14P50281 582 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 HDLBPQ00341 1268 aaKnown RBP12.65□□□□□ -0.38
UBE2F-220ENST00000472479 TBC1D10BQ4KMP7 808 aaPredicted RBP12.65□□□□□ -0.38
UBE2F-220ENST00000472479 TMED8Q6PL24 325 aaPredicted RBP12.65□□□□□ -0.38
UBE2F-220ENST00000472479 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 FAM227BQ96M60 508 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 TMOD2Q9NZR1 351 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 SERPINA10Q9UK55 444 aa12.65□□□□□ -0.38
UBE2F-220ENST00000472479 MROH7-TTC4A0A0A0MT08 1334 aa12.64□□□□□ -0.39
UBE2F-220ENST00000472479 MBD4O95243 580 aa12.64□□□□□ -0.39
UBE2F-220ENST00000472479 CHGBP05060 677 aa12.64□□□□□ -0.39
UBE2F-220ENST00000472479 PLCG2P16885 1265 aa12.64□□□□□ -0.39
UBE2F-220ENST00000472479 USP5P45974 858 aa12.64□□□□□ -0.39
UBE2F-220ENST00000472479 DYNLL1P63167 89 aaKnown RBP12.64□□□□□ -0.39
UBE2F-220ENST00000472479 ZMYM1Q5SVZ6 1142 aa12.64□□□□□ -0.39
UBE2F-220ENST00000472479 HHIPL2Q6UWX4 724 aa12.64□□□□□ -0.39
UBE2F-220ENST00000472479 SEC62Q99442 399 aaKnown RBP12.64□□□□□ -0.39
UBE2F-220ENST00000472479 CRNKL1Q9BZJ0 848 aaKnown RBP12.64□□□□□ -0.39
UBE2F-220ENST00000472479 ARMT1Q9H993 441 aa12.64□□□□□ -0.39
UBE2F-220ENST00000472479 MYOZ2Q9NPC6 264 aa12.64□□□□□ -0.39
UBE2F-220ENST00000472479 USP40Q9NVE5 1235 aa12.64□□□□□ -0.39
UBE2F-220ENST00000472479 GPRC5DQ9NZD1 345 aa12.64□□□□□ -0.39
UBE2F-220ENST00000472479 CCDC88AQ3V6T2 1871 aa12.63□□□□□ -0.39
UBE2F-220ENST00000472479 IQCA1LA6NCM1 817 aa12.63□□□□□ -0.39
UBE2F-220ENST00000472479 CCDC129Q6ZRS4 1044 aa12.63□□□□□ -0.39
UBE2F-220ENST00000472479 SAMD7Q7Z3H4 446 aa12.63□□□□□ -0.39
UBE2F-220ENST00000472479 CERS3Q8IU89 383 aa12.63□□□□□ -0.39
UBE2F-220ENST00000472479 TEX11Q8IYF3 940 aa12.63□□□□□ -0.39
UBE2F-220ENST00000472479 OSBP2Q969R2 916 aa12.63□□□□□ -0.39
UBE2F-220ENST00000472479 GMLQ99445 158 aa12.63□□□□□ -0.39
UBE2F-220ENST00000472479 MRIQ9BWK5 157 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms