RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 HSPA6P17066 643 aa15.21■□□□□ 0.03
SCNM1-205ENST00000471039 NBPF9Q3BBW0 867 aa15.21■□□□□ 0.03
SCNM1-205ENST00000471039 CFAP100Q494V2 611 aa15.21■□□□□ 0.03
SCNM1-205ENST00000471039 CCDC158Q5M9N0 1113 aa15.21■□□□□ 0.03
SCNM1-205ENST00000471039 AK9Q5TCS8 1911 aa15.21■□□□□ 0.02
SCNM1-205ENST00000471039 AOX1Q06278 1338 aa15.2■□□□□ 0.02
SCNM1-205ENST00000471039 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
SCNM1-205ENST00000471039 SMARCA5O60264 1052 aaPredicted RBP15.2■□□□□ 0.02
SCNM1-205ENST00000471039 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
SCNM1-205ENST00000471039 CRKP46108 304 aa15.2■□□□□ 0.02
SCNM1-205ENST00000471039 HDAC1Q13547 482 aaPredicted RBP15.2■□□□□ 0.02
SCNM1-205ENST00000471039 DLGAP5Q15398 846 aa15.2■□□□□ 0.02
SCNM1-205ENST00000471039 ANGEL2Q5VTE6 544 aaKnown RBP15.2■□□□□ 0.02
SCNM1-205ENST00000471039 ZGPATQ8N5A5 531 aaKnown RBP15.2■□□□□ 0.02
SCNM1-205ENST00000471039 SPATA5Q8NB90 893 aa15.2■□□□□ 0.02
SCNM1-205ENST00000471039 ZNF512BQ96KM6 892 aaPredicted RBP15.2■□□□□ 0.02
SCNM1-205ENST00000471039 GLIS2Q9BZE0 524 aaPredicted RBP15.2■□□□□ 0.02
SCNM1-205ENST00000471039 SERPINA10Q9UK55 444 aa15.2■□□□□ 0.02
SCNM1-205ENST00000471039 THSD7BQ9C0I4 1608 aa15.2■□□□□ 0.02
SCNM1-205ENST00000471039 ADM5C9JUS6 153 aa15.19■□□□□ 0.02
SCNM1-205ENST00000471039 TRAF5O00463 557 aa15.19■□□□□ 0.02
SCNM1-205ENST00000471039 LDHBP07195 334 aaKnown RBP15.19■□□□□ 0.02
SCNM1-205ENST00000471039 IFIT2P09913 472 aaKnown RBP15.19■□□□□ 0.02
SCNM1-205ENST00000471039 TEKT1Q969V4 418 aa15.19■□□□□ 0.02
SCNM1-205ENST00000471039 DCPSQ96C86 337 aaKnown RBP15.19■□□□□ 0.02
SCNM1-205ENST00000471039 DDX60LQ5H9U9 1706 aaKnown RBP15.18■□□□□ 0.02
SCNM1-205ENST00000471039 APLP1P51693 650 aa15.18■□□□□ 0.02
SCNM1-205ENST00000471039 RBM5P52756 815 aaKnown RBP eCLIP15.18■□□□□ 0.02
SCNM1-205ENST00000471039 HDLBPQ00341 1268 aaKnown RBP15.18■□□□□ 0.02
SCNM1-205ENST00000471039 FMR1Q06787 632 aaKnown RBP eCLIP15.18■□□□□ 0.02
SCNM1-205ENST00000471039 CDC37L1Q7L3B6 337 aa15.18■□□□□ 0.02
SCNM1-205ENST00000471039 KRT26Q7Z3Y9 468 aa15.18■□□□□ 0.02
SCNM1-205ENST00000471039 BCL11AQ9H165 835 aa15.18■□□□□ 0.02
SCNM1-205ENST00000471039 ABCF2Q9UG63 623 aa15.18■□□□□ 0.02
SCNM1-205ENST00000471039 LAMB1P07942 1786 aa15.18■□□□□ 0.02
SCNM1-205ENST00000471039 NAV1Q8NEY1 1877 aa15.18■□□□□ 0.02
SCNM1-205ENST00000471039 DIXDC1Q155Q3 683 aa15.17■□□□□ 0.02
SCNM1-205ENST00000471039 DZIP1Q86YF9 867 aaKnown RBP15.17■□□□□ 0.02
SCNM1-205ENST00000471039 APOBEC3FQ8IUX4 373 aaKnown RBP15.17■□□□□ 0.02
SCNM1-205ENST00000471039 SULF1Q8IWU6 871 aa15.17■□□□□ 0.02
SCNM1-205ENST00000471039 PRMT6Q96LA8 375 aaPredicted RBP15.17■□□□□ 0.02
SCNM1-205ENST00000471039 ZDHHC15Q96MV8 337 aa15.17■□□□□ 0.02
SCNM1-205ENST00000471039 SNRKQ9NRH2 765 aa15.17■□□□□ 0.02
SCNM1-205ENST00000471039 SCAF8Q9UPN6 1271 aaKnown RBP15.17■□□□□ 0.02
SCNM1-205ENST00000471039 CEP350Q5VT06 3117 aa15.17■□□□□ 0.02
SCNM1-205ENST00000471039 SSC5DA1L4H1 1573 aa15.16■□□□□ 0.02
SCNM1-205ENST00000471039 CLRN2A0PK11 232 aa15.16■□□□□ 0.02
SCNM1-205ENST00000471039 MYO1BO43795 1136 aa15.16■□□□□ 0.02
SCNM1-205ENST00000471039 ZAP70P43403 619 aa15.16■□□□□ 0.02
SCNM1-205ENST00000471039 USP48Q86UV5 1035 aa15.16■□□□□ 0.02
SCNM1-205ENST00000471039 GCC1Q96CN9 775 aa15.16■□□□□ 0.02
SCNM1-205ENST00000471039 DAGLAQ9Y4D2 1042 aa15.16■□□□□ 0.02
SCNM1-205ENST00000471039 GAKO14976 1311 aa15.16■□□□□ 0.02
SCNM1-205ENST00000471039 RFX7Q2KHR2 1363 aa15.15■□□□□ 0.02
SCNM1-205ENST00000471039 CYP2E1P05181 493 aaPredicted RBP15.15■□□□□ 0.02
SCNM1-205ENST00000471039 SPDYE2Q495Y8 402 aa15.15■□□□□ 0.02
SCNM1-205ENST00000471039 SPTY2D1Q68D10 685 aaPredicted RBP15.15■□□□□ 0.02
SCNM1-205ENST00000471039 HHIPL2Q6UWX4 724 aa15.15■□□□□ 0.02
SCNM1-205ENST00000471039 DLK2Q6UY11 383 aa15.15■□□□□ 0.02
SCNM1-205ENST00000471039 TBC1D9Q6ZT07 1266 aa15.15■□□□□ 0.02
SCNM1-205ENST00000471039 ERICH6Q7L0X2 663 aa15.15■□□□□ 0.02
SCNM1-205ENST00000471039 ZNF384Q8TF68 577 aa15.15■□□□□ 0.02
SCNM1-205ENST00000471039 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.15■□□□□ 0.02
SCNM1-205ENST00000471039 NDUFB9Q9Y6M9 179 aa15.15■□□□□ 0.02
SCNM1-205ENST00000471039 SIPA1L1O43166 1804 aa15.15■□□□□ 0.02
SCNM1-205ENST00000471039 MROH7-TTC4A0A0A0MT08 1334 aa15.15■□□□□ 0.02
SCNM1-205ENST00000471039 MYH1P12882 1939 aa15.14■□□□□ 0.01
SCNM1-205ENST00000471039 MECOMQ03112 1051 aa15.14■□□□□ 0.01
SCNM1-205ENST00000471039 APOBEC3HQ6NTF7 200 aaKnown RBP15.14■□□□□ 0.01
SCNM1-205ENST00000471039 CDCA5Q96FF9 252 aa15.14■□□□□ 0.01
SCNM1-205ENST00000471039 MRIQ9BWK5 157 aa15.14■□□□□ 0.01
SCNM1-205ENST00000471039 TDRD3Q9H7E2 651 aaKnown RBP15.14■□□□□ 0.01
SCNM1-205ENST00000471039 VEZTQ9HBM0 779 aa15.14■□□□□ 0.01
SCNM1-205ENST00000471039 PIH1D3Q9NQM4 214 aaKnown RBP15.14■□□□□ 0.01
SCNM1-205ENST00000471039 CREBZFQ9NS37 354 aa15.14■□□□□ 0.01
SCNM1-205ENST00000471039 TMEM88BA6NKF7 163 aa15.13■□□□□ 0.01
SCNM1-205ENST00000471039 IGHDP01880 384 aa15.13■□□□□ 0.01
SCNM1-205ENST00000471039 HTRA3P83110 453 aa15.13■□□□□ 0.01
SCNM1-205ENST00000471039 SMC5Q8IY18 1101 aa15.13■□□□□ 0.01
SCNM1-205ENST00000471039 NSUN4Q96CB9 384 aaKnown RBP15.13■□□□□ 0.01
SCNM1-205ENST00000471039 RWDD1Q9H446 243 aaPredicted RBP15.13■□□□□ 0.01
SCNM1-205ENST00000471039 ZNF408Q9H9D4 720 aa15.13■□□□□ 0.01
SCNM1-205ENST00000471039 RAI14Q9P0K7 980 aa15.13■□□□□ 0.01
SCNM1-205ENST00000471039 ZNF70Q9UC06 446 aaPredicted RBP15.13■□□□□ 0.01
SCNM1-205ENST00000471039 SALL3Q9BXA9 1300 aa15.13■□□□□ 0.01
SCNM1-205ENST00000471039 RPAP1Q9BWH6 1393 aaPredicted RBP15.12■□□□□ 0.01
SCNM1-205ENST00000471039 CELF2O95319 508 aaKnown RBP15.12■□□□□ 0.01
SCNM1-205ENST00000471039 ATP5JP18859 108 aa15.12■□□□□ 0.01
SCNM1-205ENST00000471039 CST9Q5W186 159 aa15.12■□□□□ 0.01
SCNM1-205ENST00000471039 DNAJC2Q99543 621 aaKnown RBP15.12■□□□□ 0.01
SCNM1-205ENST00000471039 ANTXR1Q9H6X2 564 aa15.12■□□□□ 0.01
SCNM1-205ENST00000471039 LRP2BPQ9P2M1 347 aa15.12■□□□□ 0.01
SCNM1-205ENST00000471039 ATAD5Q96QE3 1844 aa15.12■□□□□ 0.01
SCNM1-205ENST00000471039 CNTNAP1P78357 1384 aa15.11■□□□□ 0.01
SCNM1-205ENST00000471039 CACNB3P54284 484 aa15.11■□□□□ 0.01
SCNM1-205ENST00000471039 TNFAIP1Q13829 316 aa15.11■□□□□ 0.01
SCNM1-205ENST00000471039 TSHZ3Q63HK5 1081 aa15.11■□□□□ 0.01
SCNM1-205ENST00000471039 SLF2Q8IX21 1173 aa15.11■□□□□ 0.01
SCNM1-205ENST00000471039 OTUD7AQ8TE49 926 aaPredicted RBP15.11■□□□□ 0.01
SCNM1-205ENST00000471039 FAM163AQ96GL9 167 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms