RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 GLYCTKQ8IVS8 523 aa9.87□□□□□ -0.83
PTP4A1-202ENST00000470661 POLIQ9UNA4 740 aa9.87□□□□□ -0.83
PTP4A1-202ENST00000470661 PTPRUQ92729 1446 aa9.87□□□□□ -0.83
PTP4A1-202ENST00000470661 METP08581 1390 aa9.87□□□□□ -0.83
PTP4A1-202ENST00000470661 M0R082 166 aa9.86□□□□□ -0.83
PTP4A1-202ENST00000470661 CPB1P15086 417 aa9.86□□□□□ -0.83
PTP4A1-202ENST00000470661 SPHKAPQ2M3C7 1700 aa9.86□□□□□ -0.83
PTP4A1-202ENST00000470661 ALKBH2Q6NS38 261 aa9.86□□□□□ -0.83
PTP4A1-202ENST00000470661 HFE2Q6ZVN8 426 aa9.86□□□□□ -0.83
PTP4A1-202ENST00000470661 ZNF417Q8TAU3 575 aa9.86□□□□□ -0.83
PTP4A1-202ENST00000470661 ZNF587Q96SQ5 575 aaPredicted RBP9.86□□□□□ -0.83
PTP4A1-202ENST00000470661 SETD5Q9C0A6 1442 aa9.86□□□□□ -0.83
PTP4A1-202ENST00000470661 CCDC87Q9NVE4 849 aa9.86□□□□□ -0.83
PTP4A1-202ENST00000470661 TLR7Q9NYK1 1049 aaKnown RBP9.86□□□□□ -0.83
PTP4A1-202ENST00000470661 MKL2Q9ULH7 1088 aa9.86□□□□□ -0.83
PTP4A1-202ENST00000470661 FNDC3AQ9Y2H6 1198 aaKnown RBP9.86□□□□□ -0.83
PTP4A1-202ENST00000470661 RNF225M0QZC1 329 aaPredicted RBP9.85□□□□□ -0.83
PTP4A1-202ENST00000470661 FZD6O60353 706 aa9.85□□□□□ -0.83
PTP4A1-202ENST00000470661 MZF1P28698 734 aaPredicted RBP9.85□□□□□ -0.83
PTP4A1-202ENST00000470661 GSK3AP49840 483 aa9.85□□□□□ -0.83
PTP4A1-202ENST00000470661 C8orf34Q49A92 452 aa9.85□□□□□ -0.83
PTP4A1-202ENST00000470661 FAM35AQ86V20 835 aa9.85□□□□□ -0.83
PTP4A1-202ENST00000470661 CCER1Q8TC90 406 aaPredicted RBP9.85□□□□□ -0.83
PTP4A1-202ENST00000470661 NSUN5Q96P11 429 aaKnown RBP9.85□□□□□ -0.83
PTP4A1-202ENST00000470661 GGNBP2Q9H3C7 697 aa9.85□□□□□ -0.83
PTP4A1-202ENST00000470661 RAB3GAP2Q9H2M9 1393 aa9.85□□□□□ -0.83
PTP4A1-202ENST00000470661 ADGRF5Q8IZF2 1346 aa9.84□□□□□ -0.83
PTP4A1-202ENST00000470661 PHF20L1A8MW92 1017 aa9.84□□□□□ -0.83
PTP4A1-202ENST00000470661 PSAPP07602 524 aa9.84□□□□□ -0.83
PTP4A1-202ENST00000470661 GPLD1P80108 840 aa9.84□□□□□ -0.83
PTP4A1-202ENST00000470661 KANK3Q6NY19 840 aa9.84□□□□□ -0.83
PTP4A1-202ENST00000470661 MICALL1Q8N3F8 863 aa9.84□□□□□ -0.83
PTP4A1-202ENST00000470661 TRPM4Q8TD43 1214 aa9.84□□□□□ -0.83
PTP4A1-202ENST00000470661 NUDT8Q8WV74 236 aa9.84□□□□□ -0.83
PTP4A1-202ENST00000470661 SUV39H2Q9H5I1 410 aa9.84□□□□□ -0.83
PTP4A1-202ENST00000470661 TMEM63CQ9P1W3 806 aa9.84□□□□□ -0.83
PTP4A1-202ENST00000470661 STK26Q9P289 416 aa9.84□□□□□ -0.83
PTP4A1-202ENST00000470661 KDM5AP29375 1690 aaKnown RBP9.83□□□□□ -0.84
PTP4A1-202ENST00000470661 PCSK2P16519 638 aa9.83□□□□□ -0.84
PTP4A1-202ENST00000470661 KCNMA1Q12791 1236 aa9.83□□□□□ -0.84
PTP4A1-202ENST00000470661 ECM1Q16610 540 aa9.83□□□□□ -0.84
PTP4A1-202ENST00000470661 TMEM132EQ6IEE7 984 aa9.83□□□□□ -0.84
PTP4A1-202ENST00000470661 PSAPL1Q6NUJ1 521 aa9.83□□□□□ -0.84
PTP4A1-202ENST00000470661 C20orf204Q6ZNR8 217 aa9.83□□□□□ -0.84
PTP4A1-202ENST00000470661 ZNF438Q7Z4V0 828 aa9.83□□□□□ -0.84
PTP4A1-202ENST00000470661 ELP3Q9H9T3 547 aa9.83□□□□□ -0.84
PTP4A1-202ENST00000470661 J3QW42 95 aa9.82□□□□□ -0.84
PTP4A1-202ENST00000470661 GNB5O14775 395 aa9.82□□□□□ -0.84
PTP4A1-202ENST00000470661 NRLP54845 237 aa9.82□□□□□ -0.84
PTP4A1-202ENST00000470661 RASSF7Q02833 373 aa9.82□□□□□ -0.84
PTP4A1-202ENST00000470661 PLAURQ03405 335 aa9.82□□□□□ -0.84
PTP4A1-202ENST00000470661 PERM1Q5SV97 790 aa9.82□□□□□ -0.84
PTP4A1-202ENST00000470661 TTC39BQ5VTQ0 682 aaPredicted RBP9.82□□□□□ -0.84
PTP4A1-202ENST00000470661 DDX17Q92841 729 aaKnown RBP9.82□□□□□ -0.84
PTP4A1-202ENST00000470661 TRAIPQ9BWF2 469 aa9.82□□□□□ -0.84
PTP4A1-202ENST00000470661 JPH1Q9HDC5 661 aaPredicted RBP9.82□□□□□ -0.84
PTP4A1-202ENST00000470661 TRPM2O94759 1503 aa9.82□□□□□ -0.84
PTP4A1-202ENST00000470661 CYP2E1P05181 493 aaPredicted RBP9.81□□□□□ -0.84
PTP4A1-202ENST00000470661 ARHGAP4P98171 946 aa9.81□□□□□ -0.84
PTP4A1-202ENST00000470661 PCSK7Q16549 785 aa9.81□□□□□ -0.84
PTP4A1-202ENST00000470661 COL13A1Q5TAT6 717 aaPredicted RBP9.81□□□□□ -0.84
PTP4A1-202ENST00000470661 PDE12Q6L8Q7 609 aaKnown RBP9.81□□□□□ -0.84
PTP4A1-202ENST00000470661 TTC16Q8NEE8 873 aa9.81□□□□□ -0.84
PTP4A1-202ENST00000470661 TRIM11Q96F44 468 aa9.81□□□□□ -0.84
PTP4A1-202ENST00000470661 ABI2Q9NYB9 513 aaPredicted RBP9.81□□□□□ -0.84
PTP4A1-202ENST00000470661 CHD2O14647 1828 aaKnown RBP9.81□□□□□ -0.84
PTP4A1-202ENST00000470661 NEXMIFQ5QGS0 1516 aa9.81□□□□□ -0.84
PTP4A1-202ENST00000470661 RPLP1P05386 114 aaKnown RBP9.8□□□□□ -0.84
PTP4A1-202ENST00000470661 EIF2AK2P19525 551 aaKnown RBP9.8□□□□□ -0.84
PTP4A1-202ENST00000470661 OR13H1Q8NG92 308 aa9.8□□□□□ -0.84
PTP4A1-202ENST00000470661 CNTN3Q9P232 1028 aa9.8□□□□□ -0.84
PTP4A1-202ENST00000470661 GNEQ9Y223 722 aaKnown RBP9.8□□□□□ -0.84
PTP4A1-202ENST00000470661 NRXN3Q9Y4C0 1643 aa9.8□□□□□ -0.84
PTP4A1-202ENST00000470661 MSH6P52701 1360 aa9.79□□□□□ -0.84
PTP4A1-202ENST00000470661 SOWAHDA6NJG2 315 aa9.79□□□□□ -0.84
PTP4A1-202ENST00000470661 LILRB5O75023 590 aa9.79□□□□□ -0.84
PTP4A1-202ENST00000470661 COL8A1P27658 744 aa9.79□□□□□ -0.84
PTP4A1-202ENST00000470661 SOX18P35713 384 aa9.79□□□□□ -0.84
PTP4A1-202ENST00000470661 COL9A3Q14050 684 aaPredicted RBP9.79□□□□□ -0.84
PTP4A1-202ENST00000470661 ELMSAN1Q6PJG2 1045 aa9.79□□□□□ -0.84
PTP4A1-202ENST00000470661 WAPLQ7Z5K2 1190 aa9.79□□□□□ -0.84
PTP4A1-202ENST00000470661 LPIN3Q9BQK8 851 aa9.79□□□□□ -0.84
PTP4A1-202ENST00000470661 KIF1BO60333 1816 aa9.79□□□□□ -0.84
PTP4A1-202ENST00000470661 LOC102724428A0A0B4J2F2 783 aa9.78□□□□□ -0.84
PTP4A1-202ENST00000470661 RGS9O75916 674 aaPredicted RBP9.78□□□□□ -0.84
PTP4A1-202ENST00000470661 GDF11O95390 407 aa9.78□□□□□ -0.84
PTP4A1-202ENST00000470661 HOXD8P13378 290 aaPredicted RBP9.78□□□□□ -0.84
PTP4A1-202ENST00000470661 ATF3P18847 181 aa9.78□□□□□ -0.84
PTP4A1-202ENST00000470661 SIK1P57059 783 aa9.78□□□□□ -0.84
PTP4A1-202ENST00000470661 PLVAPQ9BX97 442 aa9.78□□□□□ -0.84
PTP4A1-202ENST00000470661 SMG9Q9H0W8 520 aaKnown RBP9.78□□□□□ -0.84
PTP4A1-202ENST00000470661 C19orf44Q9H6X5 657 aa9.78□□□□□ -0.84
PTP4A1-202ENST00000470661 PRDM6Q9NQX0 595 aa9.78□□□□□ -0.84
PTP4A1-202ENST00000470661 BRPF3Q9ULD4 1205 aa9.78□□□□□ -0.84
PTP4A1-202ENST00000470661 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.78□□□□□ -0.84
PTP4A1-202ENST00000470661 IVNS1ABPQ9Y6Y0 642 aa9.78□□□□□ -0.84
PTP4A1-202ENST00000470661 ROBO2Q9HCK4 1378 aa9.77□□□□□ -0.84
PTP4A1-202ENST00000470661 NWD1Q149M9 1564 aa9.77□□□□□ -0.85
PTP4A1-202ENST00000470661 CCDC144AA2RUR9 1427 aa9.77□□□□□ -0.85
PTP4A1-202ENST00000470661 NID1P14543 1247 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms