RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 ZSWIM6Q9HCJ5 1215 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 EPB41L4AQ9HCS5 686 aaPredicted RBP9.97□□□□□ -0.81
GTF3A-206ENST00000470606 MYH2Q9UKX2 1941 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 SMIM22K7EJ46 135 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 K7ELQ4 463 aaPredicted RBP9.97□□□□□ -0.81
GTF3A-206ENST00000470606 FRAT2O75474 233 aaPredicted RBP9.97□□□□□ -0.81
GTF3A-206ENST00000470606 MBD4O95243 580 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 CASTP20810 708 aaKnown RBP9.97□□□□□ -0.81
GTF3A-206ENST00000470606 CYP7A1P22680 504 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 BECN1Q14457 450 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 ZSCAN25Q6NSZ9 544 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 DPP8Q6V1X1 898 aaPredicted RBP9.97□□□□□ -0.81
GTF3A-206ENST00000470606 TCEANC2Q96MN5 208 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 RIOK1Q9BRS2 568 aaKnown RBP9.97□□□□□ -0.81
GTF3A-206ENST00000470606 KCNQ5Q9NR82 932 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 RAI14Q9P0K7 980 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 TACC3Q9Y6A5 838 aa9.97□□□□□ -0.81
GTF3A-206ENST00000470606 U3KPZ7 1027 aaPredicted RBP9.97□□□□□ -0.81
GTF3A-206ENST00000470606 MAST2Q6P0Q8 1798 aa9.96□□□□□ -0.81
GTF3A-206ENST00000470606 SALL1Q9NSC2 1324 aa9.96□□□□□ -0.81
GTF3A-206ENST00000470606 GSG1L2A8MUP6 293 aa9.96□□□□□ -0.81
GTF3A-206ENST00000470606 DDIT3P35638 169 aa9.96□□□□□ -0.81
GTF3A-206ENST00000470606 PTGER2P43116 358 aa9.96□□□□□ -0.81
GTF3A-206ENST00000470606 HAND2P61296 217 aa9.96□□□□□ -0.81
GTF3A-206ENST00000470606 DYNLL1P63167 89 aaKnown RBP9.96□□□□□ -0.81
GTF3A-206ENST00000470606 LRRFIP1Q32MZ4 808 aaKnown RBP9.96□□□□□ -0.81
GTF3A-206ENST00000470606 ZNF804AQ7Z570 1209 aa9.96□□□□□ -0.81
GTF3A-206ENST00000470606 HSCBQ8IWL3 235 aa9.96□□□□□ -0.81
GTF3A-206ENST00000470606 MTFR1LQ9H019 292 aa9.96□□□□□ -0.81
GTF3A-206ENST00000470606 SLKQ9H2G2 1235 aaPredicted RBP9.96□□□□□ -0.81
GTF3A-206ENST00000470606 C21orf2O43822 256 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 AK2P54819 239 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 DOK7Q18PE1 504 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 NOL8Q76FK4 1167 aaKnown RBP9.95□□□□□ -0.82
GTF3A-206ENST00000470606 RUFY3Q7L099 469 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 CERS5Q8N5B7 392 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 CNKSR1Q969H4 720 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 MXD3Q9BW11 206 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 TM6SF1Q9BZW5 370 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 CDK5RAP2Q96SN8 1893 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 COL4A5P29400 1685 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 LARGE1O95461 756 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 ZKSCAN1P17029 563 aaPredicted RBP9.95□□□□□ -0.82
GTF3A-206ENST00000470606 DIXDC1Q155Q3 683 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 ERICH6Q7L0X2 663 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 AIDAQ96BJ3 306 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 RTFDC1Q9BY42 306 aaPredicted RBP9.95□□□□□ -0.82
GTF3A-206ENST00000470606 FOXD4L1Q9NU39 408 aa9.95□□□□□ -0.82
GTF3A-206ENST00000470606 ADAMTSL1Q8N6G6 1762 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 E7EWF7 191 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 ST18O60284 1047 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 DTNBO60941 627 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 EVX2Q03828 476 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 NAA16Q6N069 864 aaPredicted RBP9.94□□□□□ -0.82
GTF3A-206ENST00000470606 WDR66Q8TBY9 1149 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 SDR42E1Q8WUS8 393 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 TMX3Q96JJ7 454 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 INCENPQ9NQS7 918 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 FAM205AQ6ZU69 1335 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 PATL2C9JE40 543 aaKnown RBP9.94□□□□□ -0.82
GTF3A-206ENST00000470606 GTF2IP78347 998 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 ST3GAL1Q11201 340 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 TOB2Q14106 344 aaPredicted RBP9.94□□□□□ -0.82
GTF3A-206ENST00000470606 RNF20Q5VTR2 975 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 TBC1D10CQ8IV04 446 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 IFNL3Q8IZI9 196 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 ZGPATQ8N5A5 531 aaKnown RBP9.94□□□□□ -0.82
GTF3A-206ENST00000470606 TTLL6Q8N841 843 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 ZC3H12CQ9C0D7 883 aaKnown RBP9.94□□□□□ -0.82
GTF3A-206ENST00000470606 COA1Q9GZY4 146 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 DBNDD1Q9H9R9 158 aa9.94□□□□□ -0.82
GTF3A-206ENST00000470606 DAXXQ9UER7 740 aaPredicted RBP9.94□□□□□ -0.82
GTF3A-206ENST00000470606 MAGEB6P1A0A0J9YX57 407 aa9.93□□□□□ -0.82
GTF3A-206ENST00000470606 RPS6KB1P23443 525 aa9.93□□□□□ -0.82
GTF3A-206ENST00000470606 ALX1Q15699 326 aa9.93□□□□□ -0.82
GTF3A-206ENST00000470606 MFSD14BQ5SR56 506 aa9.93□□□□□ -0.82
GTF3A-206ENST00000470606 AATFQ9NY61 560 aaKnown RBP eCLIP9.93□□□□□ -0.82
GTF3A-206ENST00000470606 APPP05067 770 aa9.92□□□□□ -0.82
GTF3A-206ENST00000470606 LDHBP07195 334 aaKnown RBP9.92□□□□□ -0.82
GTF3A-206ENST00000470606 EXOSC10Q01780 885 aaKnown RBP9.92□□□□□ -0.82
GTF3A-206ENST00000470606 AOC3Q16853 763 aa9.92□□□□□ -0.82
GTF3A-206ENST00000470606 NEK1Q96PY6 1258 aa9.92□□□□□ -0.82
GTF3A-206ENST00000470606 LRRC2Q9BYS8 371 aa9.92□□□□□ -0.82
GTF3A-206ENST00000470606 PDRG1Q9NUG6 133 aa9.92□□□□□ -0.82
GTF3A-206ENST00000470606 CYP46A1Q9Y6A2 500 aa9.92□□□□□ -0.82
GTF3A-206ENST00000470606 SLC4A4Q9Y6R1 1079 aa9.92□□□□□ -0.82
GTF3A-206ENST00000470606 FER1L6Q2WGJ9 1857 aa9.92□□□□□ -0.82
GTF3A-206ENST00000470606 CYP2D7A0A087X1C5 515 aa9.92□□□□□ -0.82
GTF3A-206ENST00000470606 YDJCA8MPS7 323 aa9.92□□□□□ -0.82
GTF3A-206ENST00000470606 BLOC1S2Q6QNY1 142 aa9.92□□□□□ -0.82
GTF3A-206ENST00000470606 CHST3Q7LGC8 479 aa9.92□□□□□ -0.82
GTF3A-206ENST00000470606 GPHNQ9NQX3 736 aaPredicted RBP9.92□□□□□ -0.82
GTF3A-206ENST00000470606 TPCN1Q9ULQ1 816 aa9.92□□□□□ -0.82
GTF3A-206ENST00000470606 ZMYM6O95789 1325 aa9.91□□□□□ -0.82
GTF3A-206ENST00000470606 ANTXR2P58335 489 aa9.91□□□□□ -0.82
GTF3A-206ENST00000470606 TGFB2P61812 414 aa9.91□□□□□ -0.82
GTF3A-206ENST00000470606 CTDSPL2Q05D32 466 aa9.91□□□□□ -0.82
GTF3A-206ENST00000470606 KIAA2012Q0VF49 1180 aa9.91□□□□□ -0.82
GTF3A-206ENST00000470606 CUL4AQ13619 759 aa9.91□□□□□ -0.82
GTF3A-206ENST00000470606 ME3Q16798 604 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms