RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 TAF1P21675 1872 aa11.42□□□□□ -0.58
XRN1-208ENST00000470537 PAPPA2Q9BXP8 1791 aa11.41□□□□□ -0.58
XRN1-208ENST00000470537 UBE2Q2LH0YL09 131 aa11.41□□□□□ -0.58
XRN1-208ENST00000470537 CALD1Q05682 793 aaKnown RBP11.41□□□□□ -0.58
XRN1-208ENST00000470537 GMLQ99445 158 aa11.41□□□□□ -0.58
XRN1-208ENST00000470537 CFHR5Q9BXR6 569 aa11.41□□□□□ -0.58
XRN1-208ENST00000470537 PCCAP05165 728 aaPredicted RBP11.4□□□□□ -0.58
XRN1-208ENST00000470537 OTUD7BQ6GQQ9 843 aa11.4□□□□□ -0.58
XRN1-208ENST00000470537 NYAP1Q6ZVC0 841 aa11.4□□□□□ -0.58
XRN1-208ENST00000470537 APOBEC3FQ8IUX4 373 aaKnown RBP11.4□□□□□ -0.58
XRN1-208ENST00000470537 RUNDC1Q96C34 613 aa11.4□□□□□ -0.58
XRN1-208ENST00000470537 CWC25Q9NXE8 425 aaPredicted RBP11.4□□□□□ -0.58
XRN1-208ENST00000470537 ASTN2O75129 1339 aaPredicted RBP11.39□□□□□ -0.59
XRN1-208ENST00000470537 UNCXA6NJT0 531 aa11.39□□□□□ -0.59
XRN1-208ENST00000470537 WDR43Q15061 677 aaKnown RBP eCLIP11.39□□□□□ -0.59
XRN1-208ENST00000470537 STRIP1Q5VSL9 837 aa11.39□□□□□ -0.59
XRN1-208ENST00000470537 DUSP27Q5VZP5 1158 aa11.39□□□□□ -0.59
XRN1-208ENST00000470537 ZNF428Q96B54 188 aa11.39□□□□□ -0.59
XRN1-208ENST00000470537 COA1Q9GZY4 146 aa11.39□□□□□ -0.59
XRN1-208ENST00000470537 SEC31BQ9NQW1 1179 aa11.39□□□□□ -0.59
XRN1-208ENST00000470537 MANSC4A6NHS7 340 aaPredicted RBP11.38□□□□□ -0.59
XRN1-208ENST00000470537 TRIM6-TRIM34B2RNG4 842 aa11.38□□□□□ -0.59
XRN1-208ENST00000470537 WNT10BO00744 389 aa11.38□□□□□ -0.59
XRN1-208ENST00000470537 PPP1R12BO60237 982 aaPredicted RBP11.38□□□□□ -0.59
XRN1-208ENST00000470537 ARHGEF6Q15052 776 aa11.38□□□□□ -0.59
XRN1-208ENST00000470537 KRT24Q2M2I5 525 aa11.38□□□□□ -0.59
XRN1-208ENST00000470537 DDX12PQ92771 950 aa11.38□□□□□ -0.59
XRN1-208ENST00000470537 SLC10A4Q96EP9 437 aa11.38□□□□□ -0.59
XRN1-208ENST00000470537 BSDC1Q9NW68 430 aaPredicted RBP11.38□□□□□ -0.59
XRN1-208ENST00000470537 NEXNQ0ZGT2 675 aa11.37□□□□□ -0.59
XRN1-208ENST00000470537 NBPF9Q3BBW0 867 aa11.37□□□□□ -0.59
XRN1-208ENST00000470537 TTLL5Q6EMB2 1281 aa11.37□□□□□ -0.59
XRN1-208ENST00000470537 MYD88Q99836 296 aa11.37□□□□□ -0.59
XRN1-208ENST00000470537 LEMD3Q9Y2U8 911 aa11.37□□□□□ -0.59
XRN1-208ENST00000470537 MED23Q9ULK4 1368 aa11.37□□□□□ -0.59
XRN1-208ENST00000470537 MYO1BO43795 1136 aa11.36□□□□□ -0.59
XRN1-208ENST00000470537 ZBTB48P10074 688 aaPredicted RBP11.36□□□□□ -0.59
XRN1-208ENST00000470537 SUPT20HL1Q3ZLR7 823 aa11.36□□□□□ -0.59
XRN1-208ENST00000470537 DACT2Q5SW24 774 aa11.36□□□□□ -0.59
XRN1-208ENST00000470537 CCDC30Q5VVM6 783 aa11.36□□□□□ -0.59
XRN1-208ENST00000470537 SPRYD7Q5W111 196 aa11.36□□□□□ -0.59
XRN1-208ENST00000470537 MOB2Q70IA6 237 aa11.36□□□□□ -0.59
XRN1-208ENST00000470537 ERO1AQ96HE7 468 aa11.36□□□□□ -0.59
XRN1-208ENST00000470537 ANKRD2Q9GZV1 360 aa11.36□□□□□ -0.59
XRN1-208ENST00000470537 SCN9AQ15858 1988 aa11.36□□□□□ -0.59
XRN1-208ENST00000470537 IGHMBP2P38935 993 aaKnown RBP11.35□□□□□ -0.59
XRN1-208ENST00000470537 CCT4P50991 539 aaKnown RBP11.35□□□□□ -0.59
XRN1-208ENST00000470537 GNAI1P63096 354 aa11.35□□□□□ -0.59
XRN1-208ENST00000470537 PTPN12Q05209 780 aaKnown RBP11.35□□□□□ -0.59
XRN1-208ENST00000470537 LDLRAD1Q5T700 205 aa11.35□□□□□ -0.59
XRN1-208ENST00000470537 PRAMEF18Q5VWM3 479 aa11.35□□□□□ -0.59
XRN1-208ENST00000470537 METTL22Q9BUU2 404 aaPredicted RBP11.35□□□□□ -0.59
XRN1-208ENST00000470537 ANGEL1Q9UNK9 670 aaKnown RBP11.35□□□□□ -0.59
XRN1-208ENST00000470537 MINPP1Q9UNW1 487 aa11.35□□□□□ -0.59
XRN1-208ENST00000470537 TRIM17Q9Y577 477 aa11.35□□□□□ -0.59
XRN1-208ENST00000470537 PPP2R3BQ9Y5P8 575 aa11.35□□□□□ -0.59
XRN1-208ENST00000470537 CTSWP56202 376 aa11.34□□□□□ -0.59
XRN1-208ENST00000470537 DLGAP5Q15398 846 aa11.34□□□□□ -0.59
XRN1-208ENST00000470537 HABP4Q5JVS0 413 aaKnown RBP11.34□□□□□ -0.59
XRN1-208ENST00000470537 NBPF11Q86T75 865 aa11.34□□□□□ -0.59
XRN1-208ENST00000470537 CCDC146Q8IYE0 955 aa11.34□□□□□ -0.59
XRN1-208ENST00000470537 CCDC85AQ96PX6 553 aaPredicted RBP11.34□□□□□ -0.59
XRN1-208ENST00000470537 MPHOSPH8Q99549 860 aa11.34□□□□□ -0.59
XRN1-208ENST00000470537 MBIPQ9NS73 344 aa11.34□□□□□ -0.59
XRN1-208ENST00000470537 COL1A1P02452 1464 aaPredicted RBP11.33□□□□□ -0.6
XRN1-208ENST00000470537 PSME4Q14997 1843 aa11.33□□□□□ -0.6
XRN1-208ENST00000470537 WDHD1O75717 1129 aaPredicted RBP11.33□□□□□ -0.6
XRN1-208ENST00000470537 KCNJ4P48050 445 aa11.33□□□□□ -0.6
XRN1-208ENST00000470537 KCNC4Q03721 635 aa11.33□□□□□ -0.6
XRN1-208ENST00000470537 TTLL11Q8NHH1 800 aa11.33□□□□□ -0.6
XRN1-208ENST00000470537 DEFB129Q9H1M3 183 aa11.33□□□□□ -0.6
XRN1-208ENST00000470537 PHAXQ9H814 394 aaKnown RBP11.33□□□□□ -0.6
XRN1-208ENST00000470537 IFT57Q9NWB7 429 aa11.33□□□□□ -0.6
XRN1-208ENST00000470537 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.33□□□□□ -0.6
XRN1-208ENST00000470537 SCAF8Q9UPN6 1271 aaKnown RBP11.33□□□□□ -0.6
XRN1-208ENST00000470537 IREB2P48200 963 aaKnown RBP11.32□□□□□ -0.6
XRN1-208ENST00000470537 PRKG1Q13976 671 aa11.32□□□□□ -0.6
XRN1-208ENST00000470537 NBR1Q14596 966 aa11.32□□□□□ -0.6
XRN1-208ENST00000470537 MAP3K11Q16584 847 aa11.32□□□□□ -0.6
XRN1-208ENST00000470537 KSR2Q6VAB6 950 aa11.32□□□□□ -0.6
XRN1-208ENST00000470537 OTOP1Q7RTM1 612 aa11.32□□□□□ -0.6
XRN1-208ENST00000470537 KIAA0825Q8IV33 1275 aa11.32□□□□□ -0.6
XRN1-208ENST00000470537 LRCH3Q96II8 777 aa11.32□□□□□ -0.6
XRN1-208ENST00000470537 STK31Q9BXU1 1019 aa11.32□□□□□ -0.6
XRN1-208ENST00000470537 ZNF804BA4D1E1 1349 aa11.32□□□□□ -0.6
XRN1-208ENST00000470537 MYBBP1AQ9BQG0 1328 aaKnown RBP11.32□□□□□ -0.6
XRN1-208ENST00000470537 ELL2O00472 640 aaPredicted RBP11.31□□□□□ -0.6
XRN1-208ENST00000470537 MAP3K7O43318 606 aa11.31□□□□□ -0.6
XRN1-208ENST00000470537 SASH1O94885 1247 aa11.31□□□□□ -0.6
XRN1-208ENST00000470537 GTF2IP78347 998 aa11.31□□□□□ -0.6
XRN1-208ENST00000470537 MTMR14Q8NCE2 650 aa11.31□□□□□ -0.6
XRN1-208ENST00000470537 EFCC1Q9HA90 598 aa11.31□□□□□ -0.6
XRN1-208ENST00000470537 TSR3Q9UJK0 312 aaKnown RBP11.31□□□□□ -0.6
XRN1-208ENST00000470537 PTPN22Q9Y2R2 807 aa11.31□□□□□ -0.6
XRN1-208ENST00000470537 MAP3K2Q9Y2U5 619 aa11.31□□□□□ -0.6
XRN1-208ENST00000470537 ZNF853P0CG23 659 aa11.3□□□□□ -0.6
XRN1-208ENST00000470537 SP3Q02447 781 aa11.3□□□□□ -0.6
XRN1-208ENST00000470537 TNFAIP1Q13829 316 aa11.3□□□□□ -0.6
XRN1-208ENST00000470537 ANKRD13AQ8IZ07 590 aa11.3□□□□□ -0.6
XRN1-208ENST00000470537 ARMC5Q96C12 935 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms