RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 LRRC2Q9BYS8 371 aa11.48□□□□□ -0.57
NUP50-214ENST00000469163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.48□□□□□ -0.57
NUP50-214ENST00000469163 SPATA31A5Q5VU36 1347 aa11.48□□□□□ -0.57
NUP50-214ENST00000469163 SPATA31A7Q8IWB4 1347 aa11.48□□□□□ -0.57
NUP50-214ENST00000469163 NRKQ7Z2Y5 1582 aa11.48□□□□□ -0.57
NUP50-214ENST00000469163 COL5A2P05997 1499 aaPredicted RBP11.47□□□□□ -0.57
NUP50-214ENST00000469163 ADCY9O60503 1353 aa11.47□□□□□ -0.57
NUP50-214ENST00000469163 C6orf229H3BNL8 230 aa11.47□□□□□ -0.57
NUP50-214ENST00000469163 PNMA6AP0CW24 399 aaPredicted RBP11.47□□□□□ -0.57
NUP50-214ENST00000469163 PDE6BP35913 854 aa11.47□□□□□ -0.57
NUP50-214ENST00000469163 SLC51AQ86UW1 340 aa11.47□□□□□ -0.57
NUP50-214ENST00000469163 DRC7Q8IY82 874 aa11.47□□□□□ -0.57
NUP50-214ENST00000469163 SYAP1Q96A49 352 aaPredicted RBP11.47□□□□□ -0.57
NUP50-214ENST00000469163 MIEF2Q96C03 454 aa11.47□□□□□ -0.57
NUP50-214ENST00000469163 EAF2Q96CJ1 260 aaPredicted RBP11.47□□□□□ -0.57
NUP50-214ENST00000469163 GOPCQ9HD26 462 aa11.47□□□□□ -0.57
NUP50-214ENST00000469163 FAM53CQ9NYF3 392 aa11.47□□□□□ -0.57
NUP50-214ENST00000469163 ANKRD18BA2A2Z9 1011 aa11.47□□□□□ -0.57
NUP50-214ENST00000469163 TPD52L2O43399 206 aaKnown RBP11.47□□□□□ -0.57
NUP50-214ENST00000469163 GSPT1P15170 499 aaKnown RBP11.47□□□□□ -0.57
NUP50-214ENST00000469163 SUSD4Q5VX71 490 aa11.47□□□□□ -0.57
NUP50-214ENST00000469163 CHST3Q7LGC8 479 aa11.47□□□□□ -0.57
NUP50-214ENST00000469163 FMNL3Q8IVF7 1028 aa11.47□□□□□ -0.57
NUP50-214ENST00000469163 ACRBPQ8NEB7 543 aa11.47□□□□□ -0.57
NUP50-214ENST00000469163 KCNF1Q9H3M0 494 aa11.47□□□□□ -0.57
NUP50-214ENST00000469163 PSDA5PKW4 1024 aaPredicted RBP11.46□□□□□ -0.57
NUP50-214ENST00000469163 AP1G2O75843 785 aa11.46□□□□□ -0.57
NUP50-214ENST00000469163 IVLP07476 585 aa11.46□□□□□ -0.57
NUP50-214ENST00000469163 CYP19A1P11511 503 aaPredicted RBP11.46□□□□□ -0.57
NUP50-214ENST00000469163 PLA2G4AP47712 749 aa11.46□□□□□ -0.57
NUP50-214ENST00000469163 TCIRG1Q13488 830 aa11.46□□□□□ -0.57
NUP50-214ENST00000469163 SEC62Q99442 399 aaKnown RBP11.46□□□□□ -0.57
NUP50-214ENST00000469163 JPH2Q9BR39 696 aaPredicted RBP11.46□□□□□ -0.57
NUP50-214ENST00000469163 IFIT1P09914 478 aaKnown RBP11.46□□□□□ -0.58
NUP50-214ENST00000469163 IGHMBP2P38935 993 aaKnown RBP11.46□□□□□ -0.58
NUP50-214ENST00000469163 USP8P40818 1118 aa11.46□□□□□ -0.58
NUP50-214ENST00000469163 PKP1Q13835 747 aa11.46□□□□□ -0.58
NUP50-214ENST00000469163 TRIM74Q86UV6 250 aa11.46□□□□□ -0.58
NUP50-214ENST00000469163 TRIM73Q86UV7 250 aa11.46□□□□□ -0.58
NUP50-214ENST00000469163 LINC00116Q8NCU8 138 aa11.46□□□□□ -0.58
NUP50-214ENST00000469163 UTP14AQ9BVJ6 771 aaKnown RBP11.46□□□□□ -0.58
NUP50-214ENST00000469163 OAS2P29728 719 aaKnown RBP11.46□□□□□ -0.58
NUP50-214ENST00000469163 ADORA1P30542 326 aa11.46□□□□□ -0.58
NUP50-214ENST00000469163 ERFEQ4G0M1 354 aa11.46□□□□□ -0.58
NUP50-214ENST00000469163 FAXDC2Q96IV6 333 aa11.46□□□□□ -0.58
NUP50-214ENST00000469163 TEX13AQ9BXU3 409 aaPredicted RBP11.46□□□□□ -0.58
NUP50-214ENST00000469163 PICK1Q9NRD5 415 aa11.46□□□□□ -0.58
NUP50-214ENST00000469163 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.58
NUP50-214ENST00000469163 MBD3O95983 291 aa11.45□□□□□ -0.58
NUP50-214ENST00000469163 ACTN2P35609 894 aa11.45□□□□□ -0.58
NUP50-214ENST00000469163 HSP90AB4PQ58FF6 505 aa11.45□□□□□ -0.58
NUP50-214ENST00000469163 CEP135Q66GS9 1140 aa11.45□□□□□ -0.58
NUP50-214ENST00000469163 TMCO3Q6UWJ1 677 aa11.45□□□□□ -0.58
NUP50-214ENST00000469163 NFXL1Q6ZNB6 911 aa11.45□□□□□ -0.58
NUP50-214ENST00000469163 CNTROBQ8N137 903 aa11.45□□□□□ -0.58
NUP50-214ENST00000469163 KLHL23Q8NBE8 558 aa11.45□□□□□ -0.58
NUP50-214ENST00000469163 TRIM6Q9C030 488 aaPredicted RBP11.45□□□□□ -0.58
NUP50-214ENST00000469163 SHPRHQ149N8 1683 aa11.45□□□□□ -0.58
NUP50-214ENST00000469163 ERC2O15083 957 aa11.45□□□□□ -0.58
NUP50-214ENST00000469163 NAP1L1P55209 391 aaKnown RBP11.45□□□□□ -0.58
NUP50-214ENST00000469163 WWC2Q6AWC2 1192 aa11.45□□□□□ -0.58
NUP50-214ENST00000469163 PRPF40BQ6NWY9 871 aaKnown RBP11.45□□□□□ -0.58
NUP50-214ENST00000469163 FAM227BQ96M60 508 aa11.45□□□□□ -0.58
NUP50-214ENST00000469163 G3BP2Q9UN86 482 aaKnown RBP11.45□□□□□ -0.58
NUP50-214ENST00000469163 ZNF652Q9Y2D9 606 aa11.45□□□□□ -0.58
NUP50-214ENST00000469163 FHOD1Q9Y613 1164 aa11.45□□□□□ -0.58
NUP50-214ENST00000469163 MED1Q15648 1581 aaPredicted RBP11.45□□□□□ -0.58
NUP50-214ENST00000469163 KINO60870 393 aaKnown RBP11.44□□□□□ -0.58
NUP50-214ENST00000469163 CCDC158Q5M9N0 1113 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 CCDC186Q7Z3E2 898 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 MIGA1Q8NAN2 632 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 N4BP2L2Q92802 583 aaPredicted RBP11.44□□□□□ -0.58
NUP50-214ENST00000469163 TMX4Q9H1E5 349 aaPredicted RBP11.44□□□□□ -0.58
NUP50-214ENST00000469163 LRP2BPQ9P2M1 347 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 CCP110O43303 1012 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 COQ9O75208 318 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 PTGS1P23219 599 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 TTC22Q5TAA0 569 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 CCDC34Q96HJ3 373 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 ANAPC4Q9UJX5 808 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 ABCD1P33897 745 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 DHX8Q14562 1220 aaKnown RBP11.44□□□□□ -0.58
NUP50-214ENST00000469163 TBC1D9BQ66K14 1250 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 CCDC82Q8N4S0 544 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 CEMIPQ8WUJ3 1361 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 SMARCC1Q92922 1105 aaPredicted RBP11.44□□□□□ -0.58
NUP50-214ENST00000469163 RMI1Q9H9A7 625 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 VEZTQ9HBM0 779 aa11.44□□□□□ -0.58
NUP50-214ENST00000469163 SPATS2LQ9NUQ6 558 aaKnown RBP11.44□□□□□ -0.58
NUP50-214ENST00000469163 KIF24Q5T7B8 1368 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 ALDH1L1O75891 902 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 ZBTB7AO95365 584 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 CLCN6P51797 869 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 OLFM4Q6UX06 510 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 CLEC17AQ6ZS10 378 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 ARHGEF1Q92888 912 aaKnown RBP11.43□□□□□ -0.58
NUP50-214ENST00000469163 ECHDC1Q9NTX5 307 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 MARF1Q9Y4F3 1742 aaKnown RBP11.43□□□□□ -0.58
NUP50-214ENST00000469163 SH3TC1Q8TE82 1336 aa11.43□□□□□ -0.58
NUP50-214ENST00000469163 NF2P35240 595 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms