RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 GTF2IP78347 998 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 MAP3K12Q12852 859 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 BMP2KLQ5H9B9 411 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 MFSD14BQ5SR56 506 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 TTLL5Q6EMB2 1281 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 PI16Q6UXB8 463 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 USP17L1Q7RTZ2 530 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 GPC2Q8N158 579 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 TDRD7Q8NHU6 1098 aaKnown RBP9.83□□□□□ -0.84
HDAC6-216ENST00000468949 CREBZFQ9NS37 354 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 DIAPH3Q9NSV4 1193 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 RAI14Q9P0K7 980 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 HMG20BQ9P0W2 317 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 MAST3O60307 1309 aa9.82□□□□□ -0.84
HDAC6-216ENST00000468949 MYO3BQ8WXR4 1341 aa9.82□□□□□ -0.84
HDAC6-216ENST00000468949 IRS2Q9Y4H2 1338 aa9.82□□□□□ -0.84
HDAC6-216ENST00000468949 HIP1O00291 1037 aa9.82□□□□□ -0.84
HDAC6-216ENST00000468949 RAD17O75943 681 aa9.82□□□□□ -0.84
HDAC6-216ENST00000468949 ECM2O94769 699 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-216ENST00000468949 LDHBP07195 334 aaKnown RBP9.82□□□□□ -0.84
HDAC6-216ENST00000468949 GSPT1P15170 499 aaKnown RBP9.82□□□□□ -0.84
HDAC6-216ENST00000468949 SCARF1Q14162 830 aa9.82□□□□□ -0.84
HDAC6-216ENST00000468949 TNIP1Q15025 636 aa9.82□□□□□ -0.84
HDAC6-216ENST00000468949 STRIP1Q5VSL9 837 aa9.82□□□□□ -0.84
HDAC6-216ENST00000468949 CIAPIN1Q6FI81 312 aa9.82□□□□□ -0.84
HDAC6-216ENST00000468949 ERICH6Q7L0X2 663 aa9.82□□□□□ -0.84
HDAC6-216ENST00000468949 SLF2Q8IX21 1173 aa9.82□□□□□ -0.84
HDAC6-216ENST00000468949 NOL10Q9BSC4 688 aaKnown RBP9.82□□□□□ -0.84
HDAC6-216ENST00000468949 NDUFB9Q9Y6M9 179 aa9.82□□□□□ -0.84
HDAC6-216ENST00000468949 MYH13Q9UKX3 1938 aa9.82□□□□□ -0.84
HDAC6-216ENST00000468949 PSME4Q14997 1843 aa9.82□□□□□ -0.84
HDAC6-216ENST00000468949 COL1A1P02452 1464 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-216ENST00000468949 RFX7Q2KHR2 1363 aa9.81□□□□□ -0.84
HDAC6-216ENST00000468949 SDSP20132 328 aa9.81□□□□□ -0.84
HDAC6-216ENST00000468949 LMOD1P29536 600 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-216ENST00000468949 APLP1P51693 650 aa9.81□□□□□ -0.84
HDAC6-216ENST00000468949 GSTO1P78417 241 aa9.81□□□□□ -0.84
HDAC6-216ENST00000468949 KBTBD3Q8NAB2 608 aa9.81□□□□□ -0.84
HDAC6-216ENST00000468949 HACL1Q9UJ83 578 aa9.81□□□□□ -0.84
HDAC6-216ENST00000468949 HDAC9Q9UKV0 1011 aa9.81□□□□□ -0.84
HDAC6-216ENST00000468949 CIZ1Q9ULV3 898 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-216ENST00000468949 GJA3Q9Y6H8 435 aa9.81□□□□□ -0.84
HDAC6-216ENST00000468949 FAM205AQ6ZU69 1335 aa9.81□□□□□ -0.84
HDAC6-216ENST00000468949 SALL1Q9NSC2 1324 aa9.81□□□□□ -0.84
HDAC6-216ENST00000468949 POTECB2RU33 542 aa9.8□□□□□ -0.84
HDAC6-216ENST00000468949 EIF5BO60841 1220 aaKnown RBP9.8□□□□□ -0.84
HDAC6-216ENST00000468949 CDC45O75419 566 aa9.8□□□□□ -0.84
HDAC6-216ENST00000468949 CYP2E1P05181 493 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-216ENST00000468949 ZFYP08048 801 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-216ENST00000468949 NAA16Q6N069 864 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-216ENST00000468949 OGFOD1Q8N543 542 aa9.8□□□□□ -0.84
HDAC6-216ENST00000468949 RUFY2Q8WXA3 655 aa9.8□□□□□ -0.84
HDAC6-216ENST00000468949 EDC3Q96F86 508 aaKnown RBP9.8□□□□□ -0.84
HDAC6-216ENST00000468949 TAF1DQ9H5J8 278 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-216ENST00000468949 SUGT1Q9Y2Z0 365 aa9.8□□□□□ -0.84
HDAC6-216ENST00000468949 YDJCA8MPS7 323 aa9.79□□□□□ -0.84
HDAC6-216ENST00000468949 F8W031 263 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-216ENST00000468949 PSMD14O00487 310 aa9.79□□□□□ -0.84
HDAC6-216ENST00000468949 IGSF3O75054 1194 aa9.79□□□□□ -0.84
HDAC6-216ENST00000468949 PRDX5P30044 214 aa9.79□□□□□ -0.84
HDAC6-216ENST00000468949 RBM5P52756 815 aaKnown RBP eCLIP9.79□□□□□ -0.84
HDAC6-216ENST00000468949 FKBP1AP62942 108 aaKnown RBP9.79□□□□□ -0.84
HDAC6-216ENST00000468949 SLC9C2Q5TAH2 1124 aa9.79□□□□□ -0.84
HDAC6-216ENST00000468949 RSBN1LQ6PCB5 846 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-216ENST00000468949 TMED8Q6PL24 325 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-216ENST00000468949 TBC1D9Q6ZT07 1266 aa9.79□□□□□ -0.84
HDAC6-216ENST00000468949 LDHDQ86WU2 507 aa9.79□□□□□ -0.84
HDAC6-216ENST00000468949 MAGEB6Q8N7X4 407 aa9.79□□□□□ -0.84
HDAC6-216ENST00000468949 ANTXR1Q9H6X2 564 aa9.79□□□□□ -0.84
HDAC6-216ENST00000468949 PIH1D3Q9NQM4 214 aaKnown RBP9.79□□□□□ -0.84
HDAC6-216ENST00000468949 MAST2Q6P0Q8 1798 aa9.78□□□□□ -0.84
HDAC6-216ENST00000468949 LDHCP07864 332 aa9.78□□□□□ -0.84
HDAC6-216ENST00000468949 CYP7A1P22680 504 aa9.78□□□□□ -0.84
HDAC6-216ENST00000468949 RPS12P25398 132 aaKnown RBP9.78□□□□□ -0.84
HDAC6-216ENST00000468949 EPHX2P34913 555 aa9.78□□□□□ -0.84
HDAC6-216ENST00000468949 SCNN1DP51172 638 aa9.78□□□□□ -0.84
HDAC6-216ENST00000468949 MFAP1P55081 439 aaKnown RBP9.78□□□□□ -0.84
HDAC6-216ENST00000468949 CXCL9Q07325 125 aa9.78□□□□□ -0.84
HDAC6-216ENST00000468949 DACT2Q5SW24 774 aa9.78□□□□□ -0.84
HDAC6-216ENST00000468949 CHADLQ6NUI6 762 aa9.78□□□□□ -0.84
HDAC6-216ENST00000468949 PNMA8AQ86V59 439 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-216ENST00000468949 TICAM2Q86XR7 235 aa9.78□□□□□ -0.84
HDAC6-216ENST00000468949 KIAA0825Q8IV33 1275 aa9.78□□□□□ -0.84
HDAC6-216ENST00000468949 AGBL3Q8NEM8 1001 aa9.78□□□□□ -0.84
HDAC6-216ENST00000468949 TTF2Q9UNY4 1162 aaKnown RBP9.78□□□□□ -0.84
HDAC6-216ENST00000468949 ZNF646O15015 1829 aaPredicted RBP9.77□□□□□ -0.84
HDAC6-216ENST00000468949 RNF113AO15541 343 aaKnown RBP9.77□□□□□ -0.85
HDAC6-216ENST00000468949 BAG3O95817 575 aa9.77□□□□□ -0.85
HDAC6-216ENST00000468949 VIL1P09327 827 aaKnown RBP9.77□□□□□ -0.85
HDAC6-216ENST00000468949 PDE6AP16499 860 aa9.77□□□□□ -0.85
HDAC6-216ENST00000468949 MECOMQ03112 1051 aa9.77□□□□□ -0.85
HDAC6-216ENST00000468949 EAPPQ56P03 285 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-216ENST00000468949 CERS3Q8IU89 383 aa9.77□□□□□ -0.85
HDAC6-216ENST00000468949 APPBP2Q92624 585 aa9.77□□□□□ -0.85
HDAC6-216ENST00000468949 TEKT1Q969V4 418 aa9.77□□□□□ -0.85
HDAC6-216ENST00000468949 AIDAQ96BJ3 306 aa9.77□□□□□ -0.85
HDAC6-216ENST00000468949 SCN9AQ15858 1988 aa9.77□□□□□ -0.85
HDAC6-216ENST00000468949 RAD50Q92878 1312 aa9.77□□□□□ -0.85
HDAC6-216ENST00000468949 ZNF532Q9HCE3 1301 aa9.77□□□□□ -0.85
HDAC6-216ENST00000468949 AK9Q5TCS8 1911 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms