RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 GYG1P46976 350 aa12.03□□□□□ -0.48
MSH5-213ENST00000468136 NAA16Q6N069 864 aaPredicted RBP12.03□□□□□ -0.48
MSH5-213ENST00000468136 Q6ZUG5 572 aa12.03□□□□□ -0.48
MSH5-213ENST00000468136 CCDC83Q8IWF9 413 aa12.03□□□□□ -0.48
MSH5-213ENST00000468136 SLF2Q8IX21 1173 aa12.03□□□□□ -0.48
MSH5-213ENST00000468136 IFNL3Q8IZI9 196 aa12.03□□□□□ -0.48
MSH5-213ENST00000468136 TBC1D22AQ8WUA7 517 aa12.03□□□□□ -0.48
MSH5-213ENST00000468136 GTF3C6Q969F1 213 aa12.03□□□□□ -0.48
MSH5-213ENST00000468136 RAI14Q9P0K7 980 aa12.03□□□□□ -0.48
MSH5-213ENST00000468136 GGA1Q9UJY5 639 aa12.03□□□□□ -0.48
MSH5-213ENST00000468136 TPCN1Q9ULQ1 816 aa12.03□□□□□ -0.48
MSH5-213ENST00000468136 IRS2Q9Y4H2 1338 aa12.03□□□□□ -0.48
MSH5-213ENST00000468136 MAGEB6P1A0A0J9YX57 407 aa12.02□□□□□ -0.49
MSH5-213ENST00000468136 TRAK2O60296 914 aa12.02□□□□□ -0.49
MSH5-213ENST00000468136 MBD4O95243 580 aa12.02□□□□□ -0.49
MSH5-213ENST00000468136 CYP7A1P22680 504 aa12.02□□□□□ -0.49
MSH5-213ENST00000468136 RCAN1P53805 252 aa12.02□□□□□ -0.49
MSH5-213ENST00000468136 DDR1Q08345 913 aa12.02□□□□□ -0.49
MSH5-213ENST00000468136 GSE1Q14687 1217 aa12.02□□□□□ -0.49
MSH5-213ENST00000468136 SMIM5Q71RC9 77 aa12.02□□□□□ -0.49
MSH5-213ENST00000468136 NOL8Q76FK4 1167 aaKnown RBP12.02□□□□□ -0.49
MSH5-213ENST00000468136 COL23A1Q86Y22 540 aaPredicted RBP12.02□□□□□ -0.49
MSH5-213ENST00000468136 MB21D2Q8IYB1 491 aaPredicted RBP12.02□□□□□ -0.49
MSH5-213ENST00000468136 TMTC2Q8N394 836 aa12.02□□□□□ -0.49
MSH5-213ENST00000468136 TDRD7Q8NHU6 1098 aaKnown RBP12.02□□□□□ -0.49
MSH5-213ENST00000468136 ABCF2Q9UG63 623 aa12.02□□□□□ -0.49
MSH5-213ENST00000468136 ANAPC4Q9UJX5 808 aa12.02□□□□□ -0.49
MSH5-213ENST00000468136 SUGT1Q9Y2Z0 365 aa12.02□□□□□ -0.49
MSH5-213ENST00000468136 NRXN2Q9P2S2 1712 aa12.01□□□□□ -0.49
MSH5-213ENST00000468136 CASZ1Q86V15 1759 aa12.01□□□□□ -0.49
MSH5-213ENST00000468136 FOXP2O15409 715 aa12.01□□□□□ -0.49
MSH5-213ENST00000468136 MBD3O95983 291 aa12.01□□□□□ -0.49
MSH5-213ENST00000468136 ZSCAN22P10073 491 aaPredicted RBP12.01□□□□□ -0.49
MSH5-213ENST00000468136 CPA1P15085 419 aa12.01□□□□□ -0.49
MSH5-213ENST00000468136 GJB2P29033 226 aa12.01□□□□□ -0.49
MSH5-213ENST00000468136 SF3B2Q13435 895 aaKnown RBP12.01□□□□□ -0.49
MSH5-213ENST00000468136 SART3Q15020 963 aaKnown RBP12.01□□□□□ -0.49
MSH5-213ENST00000468136 GRIPAP1Q4V328 841 aa12.01□□□□□ -0.49
MSH5-213ENST00000468136 CPLX2Q6PUV4 134 aaKnown RBP12.01□□□□□ -0.49
MSH5-213ENST00000468136 STOX1Q6ZVD7 989 aa12.01□□□□□ -0.49
MSH5-213ENST00000468136 STAG1Q8WVM7 1258 aa12.01□□□□□ -0.49
MSH5-213ENST00000468136 MASTLQ96GX5 879 aa12.01□□□□□ -0.49
MSH5-213ENST00000468136 ATP8A2Q9NTI2 1148 aa12.01□□□□□ -0.49
MSH5-213ENST00000468136 STK32BQ9NY57 414 aa12.01□□□□□ -0.49
MSH5-213ENST00000468136 SLC4A4Q9Y6R1 1079 aa12.01□□□□□ -0.49
MSH5-213ENST00000468136 TNRC6CQ9HCJ0 1690 aaKnown RBP12□□□□□ -0.49
MSH5-213ENST00000468136 GSG1L2A8MUP6 293 aa12□□□□□ -0.49
MSH5-213ENST00000468136 SNAP23O00161 211 aa12□□□□□ -0.49
MSH5-213ENST00000468136 BAG3O95817 575 aa12□□□□□ -0.49
MSH5-213ENST00000468136 CHGBP05060 677 aa12□□□□□ -0.49
MSH5-213ENST00000468136 SLC3A2P08195 630 aaKnown RBP12□□□□□ -0.49
MSH5-213ENST00000468136 IL1R1P14778 569 aa12□□□□□ -0.49
MSH5-213ENST00000468136 NCLP19338 710 aaKnown RBP12□□□□□ -0.49
MSH5-213ENST00000468136 SYT1P21579 422 aa12□□□□□ -0.49
MSH5-213ENST00000468136 LIFRP42702 1097 aa12□□□□□ -0.49
MSH5-213ENST00000468136 TDO2P48775 406 aa12□□□□□ -0.49
MSH5-213ENST00000468136 PPP2R5BQ15173 497 aa12□□□□□ -0.49
MSH5-213ENST00000468136 ZNF827Q17R98 1081 aa12□□□□□ -0.49
MSH5-213ENST00000468136 KLHL40Q2TBA0 621 aa12□□□□□ -0.49
MSH5-213ENST00000468136 AKNAD1Q5T1N1 836 aa12□□□□□ -0.49
MSH5-213ENST00000468136 BRF1Q92994 677 aa12□□□□□ -0.49
MSH5-213ENST00000468136 NSUN4Q96CB9 384 aaKnown RBP12□□□□□ -0.49
MSH5-213ENST00000468136 CRNKL1Q9BZJ0 848 aaKnown RBP12□□□□□ -0.49
MSH5-213ENST00000468136 ZDHHC9Q9Y397 364 aa12□□□□□ -0.49
MSH5-213ENST00000468136 ATP6V0A2Q9Y487 856 aa12□□□□□ -0.49
MSH5-213ENST00000468136 PPEF1O14829 653 aaPredicted RBP11.99□□□□□ -0.49
MSH5-213ENST00000468136 PRC1O43663 620 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 CDKL5O76039 1030 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 SRGNP10124 158 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 PLCG2P16885 1265 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 BAG6P46379 1132 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 SLC15A2Q16348 729 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 SLFNL1Q499Z3 407 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 LARP1BQ659C4 914 aaKnown RBP11.99□□□□□ -0.49
MSH5-213ENST00000468136 CC2D2BQ6DHV5 1058 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 STYK1Q6J9G0 422 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 MFSD6Q6ZSS7 791 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 FAM184AQ8NB25 1140 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 TMEM87AQ8NBN3 555 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 SMARCC2Q8TAQ2 1214 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 EYA3Q99504 573 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 RIOK1Q9BRS2 568 aaKnown RBP11.99□□□□□ -0.49
MSH5-213ENST00000468136 NOL10Q9BSC4 688 aaKnown RBP11.99□□□□□ -0.49
MSH5-213ENST00000468136 COA1Q9GZY4 146 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 ZSCAN16Q9H4T2 348 aaPredicted RBP11.99□□□□□ -0.49
MSH5-213ENST00000468136 ANGEL1Q9UNK9 670 aaKnown RBP11.99□□□□□ -0.49
MSH5-213ENST00000468136 TAF6LQ9Y6J9 622 aa11.99□□□□□ -0.49
MSH5-213ENST00000468136 TNS1Q9HBL0 1735 aaKnown RBP11.99□□□□□ -0.49
MSH5-213ENST00000468136 QSER1Q2KHR3 1735 aa11.98□□□□□ -0.49
MSH5-213ENST00000468136 FAM205AQ6ZU69 1335 aa11.98□□□□□ -0.49
MSH5-213ENST00000468136 UFL1O94874 794 aa11.98□□□□□ -0.49
MSH5-213ENST00000468136 LARGE1O95461 756 aa11.98□□□□□ -0.49
MSH5-213ENST00000468136 F13A1P00488 732 aa11.98□□□□□ -0.49
MSH5-213ENST00000468136 LDHBP07195 334 aaKnown RBP11.98□□□□□ -0.49
MSH5-213ENST00000468136 PPP4CP60510 307 aa11.98□□□□□ -0.49
MSH5-213ENST00000468136 ATL3Q6DD88 541 aa11.98□□□□□ -0.49
MSH5-213ENST00000468136 TTLL5Q6EMB2 1281 aa11.98□□□□□ -0.49
MSH5-213ENST00000468136 SGMS1Q86VZ5 419 aa11.98□□□□□ -0.49
MSH5-213ENST00000468136 DZIP1Q86YF9 867 aaKnown RBP11.98□□□□□ -0.49
MSH5-213ENST00000468136 CCDC125Q86Z20 511 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms