RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 TCIRG1Q13488 830 aa9.68□□□□□ -0.86
SPTA1-204ENST00000467387 KIF4BQ2VIQ3 1234 aa9.68□□□□□ -0.86
SPTA1-204ENST00000467387 DLK2Q6UY11 383 aa9.68□□□□□ -0.86
SPTA1-204ENST00000467387 PLEKHF1Q96S99 279 aa9.68□□□□□ -0.86
SPTA1-204ENST00000467387 SAGE1Q9NXZ1 904 aa9.68□□□□□ -0.86
SPTA1-204ENST00000467387 LAS1LQ9Y4W2 734 aaKnown RBP9.68□□□□□ -0.86
SPTA1-204ENST00000467387 LRRC37AA6NMS7 1700 aa9.68□□□□□ -0.86
SPTA1-204ENST00000467387 DDX60Q8IY21 1712 aaKnown RBP9.68□□□□□ -0.86
SPTA1-204ENST00000467387 TRPA1O75762 1119 aa9.67□□□□□ -0.86
SPTA1-204ENST00000467387 UFL1O94874 794 aa9.67□□□□□ -0.86
SPTA1-204ENST00000467387 NEFLP07196 543 aa9.67□□□□□ -0.86
SPTA1-204ENST00000467387 RTL5Q5HYW3 569 aaPredicted RBP9.67□□□□□ -0.86
SPTA1-204ENST00000467387 HDGFL1Q5TGJ6 251 aa9.67□□□□□ -0.86
SPTA1-204ENST00000467387 DPF2Q92785 391 aa9.67□□□□□ -0.86
SPTA1-204ENST00000467387 CHPF2Q9P2E5 772 aa9.67□□□□□ -0.86
SPTA1-204ENST00000467387 ATP5J2-PTCD1G3V325 749 aa9.66□□□□□ -0.86
SPTA1-204ENST00000467387 KDM4AO75164 1064 aa9.66□□□□□ -0.86
SPTA1-204ENST00000467387 EGFRP00533 1210 aa9.66□□□□□ -0.86
SPTA1-204ENST00000467387 GPSM2P81274 684 aa9.66□□□□□ -0.86
SPTA1-204ENST00000467387 FUT2Q10981 343 aa9.66□□□□□ -0.86
SPTA1-204ENST00000467387 LRP10Q7Z4F1 713 aa9.66□□□□□ -0.86
SPTA1-204ENST00000467387 CELF1Q92879 486 aaKnown RBP9.66□□□□□ -0.86
SPTA1-204ENST00000467387 CDCA5Q96FF9 252 aa9.66□□□□□ -0.86
SPTA1-204ENST00000467387 FAM89AQ96GI7 184 aa9.66□□□□□ -0.86
SPTA1-204ENST00000467387 ANKIB1Q9P2G1 1089 aa9.66□□□□□ -0.86
SPTA1-204ENST00000467387 RTL9Q8NET4 1388 aa9.65□□□□□ -0.86
SPTA1-204ENST00000467387 FAM155AB1AL88 458 aaPredicted RBP9.65□□□□□ -0.86
SPTA1-204ENST00000467387 CTU1Q7Z7A3 348 aaKnown RBP9.65□□□□□ -0.86
SPTA1-204ENST00000467387 ZC3H12CQ9C0D7 883 aaKnown RBP9.65□□□□□ -0.86
SPTA1-204ENST00000467387 BABAM1Q9NWV8 329 aa9.65□□□□□ -0.86
SPTA1-204ENST00000467387 RNF186Q9NXI6 227 aa9.65□□□□□ -0.86
SPTA1-204ENST00000467387 PCDHB3Q9Y5E6 796 aa9.65□□□□□ -0.86
SPTA1-204ENST00000467387 IRS4O14654 1257 aaPredicted RBP9.64□□□□□ -0.87
SPTA1-204ENST00000467387 HSP90B1P14625 803 aaKnown RBP9.64□□□□□ -0.87
SPTA1-204ENST00000467387 KRT24Q2M2I5 525 aa9.64□□□□□ -0.87
SPTA1-204ENST00000467387 TJAP1Q5JTD0 557 aa9.64□□□□□ -0.87
SPTA1-204ENST00000467387 ANGEL2Q5VTE6 544 aaKnown RBP9.64□□□□□ -0.87
SPTA1-204ENST00000467387 CCDC146Q8IYE0 955 aa9.64□□□□□ -0.87
SPTA1-204ENST00000467387 PLBD2Q8NHP8 589 aa9.64□□□□□ -0.87
SPTA1-204ENST00000467387 TBC1D16Q8TBP0 767 aa9.64□□□□□ -0.87
SPTA1-204ENST00000467387 SPIRE2Q8WWL2 714 aa9.64□□□□□ -0.87
SPTA1-204ENST00000467387 MTRQ99707 1265 aa9.64□□□□□ -0.87
SPTA1-204ENST00000467387 FAM117AQ9C073 453 aa9.64□□□□□ -0.87
SPTA1-204ENST00000467387 POLLQ9UGP5 575 aa9.64□□□□□ -0.87
SPTA1-204ENST00000467387 GGA1Q9UJY5 639 aa9.64□□□□□ -0.87
SPTA1-204ENST00000467387 HDAC9Q9UKV0 1011 aa9.64□□□□□ -0.87
SPTA1-204ENST00000467387 TAF1P21675 1872 aa9.64□□□□□ -0.87
SPTA1-204ENST00000467387 ASTN2O75129 1339 aaPredicted RBP9.63□□□□□ -0.87
SPTA1-204ENST00000467387 TMPOP42166 694 aaKnown RBP9.63□□□□□ -0.87
SPTA1-204ENST00000467387 USP46P62068 366 aa9.63□□□□□ -0.87
SPTA1-204ENST00000467387 SF3B3Q15393 1217 aaKnown RBP9.63□□□□□ -0.87
SPTA1-204ENST00000467387 BLOC1S3Q6QNY0 202 aa9.63□□□□□ -0.87
SPTA1-204ENST00000467387 RASAL3Q86YV0 1011 aa9.63□□□□□ -0.87
SPTA1-204ENST00000467387 KCNQ5Q9NR82 932 aa9.63□□□□□ -0.87
SPTA1-204ENST00000467387 DBF4Q9UBU7 674 aaPredicted RBP9.63□□□□□ -0.87
SPTA1-204ENST00000467387 PAPPA2Q9BXP8 1791 aa9.63□□□□□ -0.87
SPTA1-204ENST00000467387 HOXA2O43364 376 aa9.62□□□□□ -0.87
SPTA1-204ENST00000467387 RPS8P62241 208 aaKnown RBP9.62□□□□□ -0.87
SPTA1-204ENST00000467387 SCARF1Q14162 830 aa9.62□□□□□ -0.87
SPTA1-204ENST00000467387 WDR43Q15061 677 aaKnown RBP eCLIP9.62□□□□□ -0.873e-6■□□□□ 11.1
SPTA1-204ENST00000467387 CCDC152Q4G0S7 254 aa9.62□□□□□ -0.87
SPTA1-204ENST00000467387 MORN1Q5T089 497 aa9.62□□□□□ -0.87
SPTA1-204ENST00000467387 PRPF38BQ5VTL8 546 aaKnown RBP9.62□□□□□ -0.87
SPTA1-204ENST00000467387 RIC3Q7Z5B4 369 aa9.62□□□□□ -0.87
SPTA1-204ENST00000467387 CCDC85AQ96PX6 553 aaPredicted RBP9.62□□□□□ -0.87
SPTA1-204ENST00000467387 HYPKQ9NX55 129 aa9.62□□□□□ -0.87
SPTA1-204ENST00000467387 TNRC18O15417 2968 aaPredicted RBP9.62□□□□□ -0.87
SPTA1-204ENST00000467387 AKAP11Q9UKA4 1901 aa9.61□□□□□ -0.87
SPTA1-204ENST00000467387 USP17L8P0C7I0 530 aa9.61□□□□□ -0.87
SPTA1-204ENST00000467387 NF2P35240 595 aa9.61□□□□□ -0.87
SPTA1-204ENST00000467387 FKBP1BP68106 108 aa9.61□□□□□ -0.87
SPTA1-204ENST00000467387 PUS10Q3MIT2 529 aaKnown RBP9.61□□□□□ -0.87
SPTA1-204ENST00000467387 RSBN1LQ6PCB5 846 aaPredicted RBP9.61□□□□□ -0.87
SPTA1-204ENST00000467387 DDRGK1Q96HY6 314 aa9.61□□□□□ -0.87
SPTA1-204ENST00000467387 CSRNP1Q96S65 589 aa9.61□□□□□ -0.87
SPTA1-204ENST00000467387 ISCA1Q9BUE6 129 aa9.61□□□□□ -0.87
SPTA1-204ENST00000467387 TBC1D2Q9BYX2 928 aa9.61□□□□□ -0.87
SPTA1-204ENST00000467387 IL21Q9HBE4 155 aa9.61□□□□□ -0.87
SPTA1-204ENST00000467387 MYOZ2Q9NPC6 264 aa9.61□□□□□ -0.87
SPTA1-204ENST00000467387 COL4A1P02462 1669 aa9.61□□□□□ -0.87
SPTA1-204ENST00000467387 XDHP47989 1333 aa9.6□□□□□ -0.87
SPTA1-204ENST00000467387 VIL1P09327 827 aaKnown RBP9.6□□□□□ -0.87
SPTA1-204ENST00000467387 HOXB7P09629 217 aa9.6□□□□□ -0.87
SPTA1-204ENST00000467387 ZNF280AP59817 542 aaPredicted RBP9.6□□□□□ -0.87
SPTA1-204ENST00000467387 COPS2P61201 443 aa9.6□□□□□ -0.87
SPTA1-204ENST00000467387 ANKRD18AQ8IVF6 992 aa9.6□□□□□ -0.87
SPTA1-204ENST00000467387 AGBL3Q8NEM8 1001 aa9.6□□□□□ -0.87
SPTA1-204ENST00000467387 SEC31BQ9NQW1 1179 aa9.6□□□□□ -0.87
SPTA1-204ENST00000467387 UBE2Q2LH0YL09 131 aa9.59□□□□□ -0.87
SPTA1-204ENST00000467387 CHL1O00533 1208 aa9.59□□□□□ -0.87
SPTA1-204ENST00000467387 TBC1D8O95759 1140 aa9.59□□□□□ -0.87
SPTA1-204ENST00000467387 RALBP1Q15311 655 aa9.59□□□□□ -0.87
SPTA1-204ENST00000467387 DUSP27Q5VZP5 1158 aa9.59□□□□□ -0.87
SPTA1-204ENST00000467387 MOB2Q70IA6 237 aa9.59□□□□□ -0.87
SPTA1-204ENST00000467387 OGFOD1Q8N543 542 aa9.59□□□□□ -0.87
SPTA1-204ENST00000467387 ZBTB38Q8NAP3 1195 aaPredicted RBP9.59□□□□□ -0.87
SPTA1-204ENST00000467387 HLA-CQ95604 372 aa9.59□□□□□ -0.87
SPTA1-204ENST00000467387 MYD88Q99836 296 aa9.59□□□□□ -0.87
SPTA1-204ENST00000467387 PODXL2Q9NZ53 605 aa9.59□□□□□ -0.87
SPTA1-204ENST00000467387 SCAF8Q9UPN6 1271 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms