RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 MBD4O95243 580 aa13.42□□□□□ -0.26
HPS1-208ENST00000467246 CYB5R4Q7L1T6 521 aa13.42□□□□□ -0.26
HPS1-208ENST00000467246 FTOQ9C0B1 505 aaKnown RBP eCLIP13.42□□□□□ -0.26
HPS1-208ENST00000467246 ARMT1Q9H993 441 aa13.42□□□□□ -0.26
HPS1-208ENST00000467246 TRDNQ13061 729 aa13.42□□□□□ -0.26
HPS1-208ENST00000467246 EPB41L4AQ9HCS5 686 aaPredicted RBP13.42□□□□□ -0.26
HPS1-208ENST00000467246 DACT1Q9NYF0 836 aa13.42□□□□□ -0.26
HPS1-208ENST00000467246 KIF3AQ9Y496 699 aa13.42□□□□□ -0.26
HPS1-208ENST00000467246 CARMIL3Q8ND23 1372 aa13.42□□□□□ -0.26
HPS1-208ENST00000467246 TBC1D9BQ66K14 1250 aa13.41□□□□□ -0.26
HPS1-208ENST00000467246 CDC5LQ99459 802 aaKnown RBP13.41□□□□□ -0.26
HPS1-208ENST00000467246 BCL2L12Q9HB09 334 aa13.41□□□□□ -0.26
HPS1-208ENST00000467246 COL5A3P25940 1745 aaPredicted RBP13.41□□□□□ -0.26
HPS1-208ENST00000467246 ARAP2Q8WZ64 1704 aa13.41□□□□□ -0.26
HPS1-208ENST00000467246 B4E1Z4 1266 aa13.41□□□□□ -0.26
HPS1-208ENST00000467246 OTUD7BQ6GQQ9 843 aa13.41□□□□□ -0.26
HPS1-208ENST00000467246 PATL2C9JE40 543 aaKnown RBP13.4□□□□□ -0.26
HPS1-208ENST00000467246 PRKAB2O43741 272 aa13.4□□□□□ -0.26
HPS1-208ENST00000467246 IFNL3Q8IZI9 196 aa13.4□□□□□ -0.26
HPS1-208ENST00000467246 SRP68Q9UHB9 627 aaKnown RBP13.4□□□□□ -0.26
HPS1-208ENST00000467246 CFAP45Q9UL16 551 aa13.4□□□□□ -0.26
HPS1-208ENST00000467246 RRP9O43818 475 aaKnown RBP13.4□□□□□ -0.26
HPS1-208ENST00000467246 GYG1P46976 350 aa13.4□□□□□ -0.26
HPS1-208ENST00000467246 ILDR1Q86SU0 546 aaPredicted RBP13.4□□□□□ -0.26
HPS1-208ENST00000467246 ZSCAN30Q86W11 494 aa13.4□□□□□ -0.26
HPS1-208ENST00000467246 ANKRD18AQ8IVF6 992 aa13.4□□□□□ -0.26
HPS1-208ENST00000467246 NUP62CLQ9H1M0 184 aa13.4□□□□□ -0.26
HPS1-208ENST00000467246 SENP2Q9HC62 589 aa13.4□□□□□ -0.26
HPS1-208ENST00000467246 NEDD4P46934 1319 aa13.4□□□□□ -0.26
HPS1-208ENST00000467246 NR1I2O75469 434 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 GTF2E1P29083 439 aaPredicted RBP13.39□□□□□ -0.27
HPS1-208ENST00000467246 SF3B3Q15393 1217 aaKnown RBP13.39□□□□□ -0.27
HPS1-208ENST00000467246 FNBP4Q8N3X1 1017 aaPredicted RBP13.39□□□□□ -0.27
HPS1-208ENST00000467246 LCORLQ8N3X6 602 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 BICD2Q8TD16 824 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 USP28Q96RU2 1077 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 GJB4Q9NTQ9 266 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 LRP2BPQ9P2M1 347 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 ANGEL1Q9UNK9 670 aaKnown RBP13.39□□□□□ -0.27
HPS1-208ENST00000467246 WDR19Q8NEZ3 1342 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 CNTNAP4Q9C0A0 1308 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 GSG1L2A8MUP6 293 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 DHX16O60231 1041 aaKnown RBP13.39□□□□□ -0.27
HPS1-208ENST00000467246 RXRAP19793 462 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 CTDSPL2Q05D32 466 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 ALX1Q15699 326 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 MIGA1Q8NAN2 632 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 CELF1Q92879 486 aaKnown RBP13.39□□□□□ -0.27
HPS1-208ENST00000467246 CHMP4CQ96CF2 233 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 NAPBQ9H115 298 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 USP25Q9UHP3 1055 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 TACC3Q9Y6A5 838 aa13.39□□□□□ -0.27
HPS1-208ENST00000467246 CPLX1O14810 134 aa13.38□□□□□ -0.27
HPS1-208ENST00000467246 UVSSAQ2YD98 709 aa13.38□□□□□ -0.27
HPS1-208ENST00000467246 AMIGO3Q86WK7 504 aa13.38□□□□□ -0.27
HPS1-208ENST00000467246 CKAP2LQ8IYA6 745 aa13.38□□□□□ -0.27
HPS1-208ENST00000467246 CCDC24Q8N4L8 307 aa13.38□□□□□ -0.27
HPS1-208ENST00000467246 ORC3Q9UBD5 711 aaPredicted RBP13.38□□□□□ -0.27
HPS1-208ENST00000467246 USP21Q9UK80 565 aa13.38□□□□□ -0.27
HPS1-208ENST00000467246 TAF1P21675 1872 aa13.38□□□□□ -0.27
HPS1-208ENST00000467246 BCORQ6W2J9 1755 aa13.38□□□□□ -0.27
HPS1-208ENST00000467246 SH2B2O14492 632 aaPredicted RBP13.38□□□□□ -0.27
HPS1-208ENST00000467246 MAP3K11Q16584 847 aa13.38□□□□□ -0.27
HPS1-208ENST00000467246 HS1BP3Q53T59 392 aa13.38□□□□□ -0.27
HPS1-208ENST00000467246 BSDC1Q9NW68 430 aaPredicted RBP13.38□□□□□ -0.27
HPS1-208ENST00000467246 MINPP1Q9UNW1 487 aa13.38□□□□□ -0.27
HPS1-208ENST00000467246 LAMB2P55268 1798 aa13.38□□□□□ -0.27
HPS1-208ENST00000467246 GNPATO15228 680 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 ADGRA1Q86SQ6 560 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 TNMDQ9H2S6 317 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 ABCF2Q9UG63 623 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 RCOR1Q9UKL0 485 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 RPS6KA4O75676 772 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 CCDC192P0DO97 292 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 IGDCC4Q8TDY8 1250 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 C8orf76Q96K31 380 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.37□□□□□ -0.27
HPS1-208ENST00000467246 NARFQ9UHQ1 456 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 SLC4A4Q9Y6R1 1079 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 SLC10A5Q5PT55 438 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 STK11IPQ8N1F8 1099 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 FBXO18Q8NFZ0 1043 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 DDX19AQ9NUU7 478 aaKnown RBP13.37□□□□□ -0.27
HPS1-208ENST00000467246 ZSWIM5Q9P217 1185 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 ZNF804BA4D1E1 1349 aa13.37□□□□□ -0.27
HPS1-208ENST00000467246 DOCK2Q92608 1830 aa13.36□□□□□ -0.27
HPS1-208ENST00000467246 KDM4AO75164 1064 aa13.36□□□□□ -0.27
HPS1-208ENST00000467246 CYP7A1P22680 504 aa13.36□□□□□ -0.27
HPS1-208ENST00000467246 APOA5Q6Q788 366 aa13.36□□□□□ -0.27
HPS1-208ENST00000467246 CCDC144CPQ8IYA2 1237 aa13.36□□□□□ -0.27
HPS1-208ENST00000467246 SETDB2Q96T68 719 aa13.36□□□□□ -0.27
HPS1-208ENST00000467246 CLSTN2Q9H4D0 955 aa13.36□□□□□ -0.27
HPS1-208ENST00000467246 CCNL1Q9UK58 526 aaPredicted RBP13.36□□□□□ -0.27
HPS1-208ENST00000467246 NOL7Q9UMY1 257 aaKnown RBP13.36□□□□□ -0.27
HPS1-208ENST00000467246 ZMYM6O95789 1325 aa13.36□□□□□ -0.27
HPS1-208ENST00000467246 POLR3DP05423 398 aaPredicted RBP13.36□□□□□ -0.27
HPS1-208ENST00000467246 CDC27P30260 824 aa13.36□□□□□ -0.27
HPS1-208ENST00000467246 TDO2P48775 406 aa13.36□□□□□ -0.27
HPS1-208ENST00000467246 METAP2P50579 478 aaKnown RBP eCLIP13.36□□□□□ -0.272e-7■■■□□ 14.6
HPS1-208ENST00000467246 UBE4AQ14139 1066 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms