RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 GAS2O43903 313 aaKnown RBP6.16□□□□□ -1.42
GTF3C3-209ENST00000466862 ADH5P11766 374 aa6.16□□□□□ -1.42
GTF3C3-209ENST00000466862 NUTM2GQ5VZR2 741 aa6.16□□□□□ -1.42
GTF3C3-209ENST00000466862 MCTP1Q6DN14 999 aa6.16□□□□□ -1.42
GTF3C3-209ENST00000466862 DTX1Q86Y01 620 aa6.16□□□□□ -1.42
GTF3C3-209ENST00000466862 GLIS3Q8NEA6 775 aa6.16□□□□□ -1.42
GTF3C3-209ENST00000466862 ALKBH8Q96BT7 664 aaKnown RBP6.16□□□□□ -1.42
GTF3C3-209ENST00000466862 CITED4Q96RK1 184 aa6.16□□□□□ -1.42
GTF3C3-209ENST00000466862 CPNE3O75131 537 aaKnown RBP6.15□□□□□ -1.42
GTF3C3-209ENST00000466862 ECEL1O95672 775 aa6.15□□□□□ -1.42
GTF3C3-209ENST00000466862 GSTM4Q03013 218 aa6.15□□□□□ -1.42
GTF3C3-209ENST00000466862 CDPF1Q6NVV7 123 aa6.15□□□□□ -1.42
GTF3C3-209ENST00000466862 SHISA5Q8N114 240 aa6.15□□□□□ -1.42
GTF3C3-209ENST00000466862 EZH1Q92800 747 aaPredicted RBP6.15□□□□□ -1.42
GTF3C3-209ENST00000466862 RBCK1Q9BYM8 510 aa6.15□□□□□ -1.42
GTF3C3-209ENST00000466862 KCNF1Q9H3M0 494 aa6.15□□□□□ -1.42
GTF3C3-209ENST00000466862 CYP4F12Q9HCS2 524 aa6.15□□□□□ -1.42
GTF3C3-209ENST00000466862 EIF1AYO14602 144 aaKnown RBP6.14□□□□□ -1.43
GTF3C3-209ENST00000466862 F13BP05160 661 aa6.14□□□□□ -1.43
GTF3C3-209ENST00000466862 DRD2P14416 443 aa6.14□□□□□ -1.43
GTF3C3-209ENST00000466862 PTPN12Q05209 780 aaKnown RBP6.14□□□□□ -1.43
GTF3C3-209ENST00000466862 PDE3BQ13370 1112 aa6.14□□□□□ -1.43
GTF3C3-209ENST00000466862 EXOSC6Q5RKV6 272 aaKnown RBP6.14□□□□□ -1.43
GTF3C3-209ENST00000466862 GATA6Q92908 595 aa6.14□□□□□ -1.43
GTF3C3-209ENST00000466862 MFSD14AQ96MC6 490 aa6.14□□□□□ -1.43
GTF3C3-209ENST00000466862 DNAJC25Q9H1X3 360 aa6.14□□□□□ -1.43
GTF3C3-209ENST00000466862 GSX1Q9H4S2 264 aaPredicted RBP6.14□□□□□ -1.43
GTF3C3-209ENST00000466862 ACTL7BQ9Y614 415 aa6.14□□□□□ -1.43
GTF3C3-209ENST00000466862 SOWAHDA6NJG2 315 aa6.13□□□□□ -1.43
GTF3C3-209ENST00000466862 MAOBP27338 520 aa6.13□□□□□ -1.43
GTF3C3-209ENST00000466862 HOXA10P31260 410 aaPredicted RBP6.13□□□□□ -1.43
GTF3C3-209ENST00000466862 SOX4Q06945 474 aaPredicted RBP6.13□□□□□ -1.43
GTF3C3-209ENST00000466862 MSMPQ1L6U9 139 aa6.13□□□□□ -1.43
GTF3C3-209ENST00000466862 INTS5Q6P9B9 1019 aaKnown RBP6.13□□□□□ -1.43
GTF3C3-209ENST00000466862 ARID3AQ99856 593 aa6.13□□□□□ -1.43
GTF3C3-209ENST00000466862 OAS3Q9Y6K5 1087 aaKnown RBP6.13□□□□□ -1.43
GTF3C3-209ENST00000466862 EIF4EBP3O60516 100 aaPredicted RBP6.12□□□□□ -1.43
GTF3C3-209ENST00000466862 POU4F3Q15319 338 aa6.12□□□□□ -1.43
GTF3C3-209ENST00000466862 CPSF6Q16630 551 aaKnown RBP eCLIP6.12□□□□□ -1.43
GTF3C3-209ENST00000466862 NFXL1Q6ZNB6 911 aa6.12□□□□□ -1.43
GTF3C3-209ENST00000466862 C12orf50Q8NA57 414 aaPredicted RBP6.12□□□□□ -1.43
GTF3C3-209ENST00000466862 FBLIM1Q8WUP2 373 aa6.12□□□□□ -1.43
GTF3C3-209ENST00000466862 CCDC74AQ96AQ1 378 aa6.12□□□□□ -1.43
GTF3C3-209ENST00000466862 GNEQ9Y223 722 aaKnown RBP6.12□□□□□ -1.43
GTF3C3-209ENST00000466862 WDR64B1ANS9 1081 aa6.11□□□□□ -1.43
GTF3C3-209ENST00000466862 SUPT5HO00267 1087 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-209ENST00000466862 NEFLP07196 543 aa6.11□□□□□ -1.43
GTF3C3-209ENST00000466862 ADMP35318 185 aa6.11□□□□□ -1.43
GTF3C3-209ENST00000466862 GRIK1P39086 918 aa6.11□□□□□ -1.43
GTF3C3-209ENST00000466862 GP2P55259 537 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-209ENST00000466862 FAAP100Q0VG06 881 aa6.11□□□□□ -1.43
GTF3C3-209ENST00000466862 GRM2Q14416 872 aa6.11□□□□□ -1.43
GTF3C3-209ENST00000466862 DMRTB1Q96MA1 342 aa6.11□□□□□ -1.43
GTF3C3-209ENST00000466862 CSRNP1Q96S65 589 aa6.11□□□□□ -1.43
GTF3C3-209ENST00000466862 EHD4Q9H223 541 aa6.11□□□□□ -1.43
GTF3C3-209ENST00000466862 ACSS3Q9H6R3 686 aa6.11□□□□□ -1.43
GTF3C3-209ENST00000466862 PRKAG2Q9UGJ0 569 aa6.11□□□□□ -1.43
GTF3C3-209ENST00000466862 COL17A1Q9UMD9 1497 aaPredicted RBP6.1□□□□□ -1.43
GTF3C3-209ENST00000466862 SYNGAP1Q96PV0 1343 aa6.1□□□□□ -1.43
GTF3C3-209ENST00000466862 FAM95CA0A1B0GW59 222 aa6.1□□□□□ -1.43
GTF3C3-209ENST00000466862 CYP11A1P05108 521 aa6.1□□□□□ -1.43
GTF3C3-209ENST00000466862 RPS26P11Q5JNZ5 115 aaPredicted RBP6.1□□□□□ -1.43
GTF3C3-209ENST00000466862 SEZ6L2Q6UXD5 910 aa6.1□□□□□ -1.43
GTF3C3-209ENST00000466862 TMC7Q7Z402 723 aa6.1□□□□□ -1.43
GTF3C3-209ENST00000466862 ZAR1Q86SH2 424 aa6.1□□□□□ -1.43
GTF3C3-209ENST00000466862 WDR18Q9BV38 432 aa6.1□□□□□ -1.43
GTF3C3-209ENST00000466862 NIF3L1Q9GZT8 377 aa6.1□□□□□ -1.43
GTF3C3-209ENST00000466862 FAM105AQ9NUU6 356 aa6.1□□□□□ -1.43
GTF3C3-209ENST00000466862 PIM2Q9P1W9 311 aa6.1□□□□□ -1.43
GTF3C3-209ENST00000466862 TMEM238LA0A1B0GVL6 79 aa6.09□□□□□ -1.43
GTF3C3-209ENST00000466862 CCER1Q8TC90 406 aaPredicted RBP6.09□□□□□ -1.43
GTF3C3-209ENST00000466862 SEMA6CQ9H3T2 930 aa6.09□□□□□ -1.43
GTF3C3-209ENST00000466862 PCDHGC5Q9Y5F6 944 aa6.09□□□□□ -1.43
GTF3C3-209ENST00000466862 PRNPP04156 253 aa6.08□□□□□ -1.44
GTF3C3-209ENST00000466862 FOSL1P15407 271 aa6.08□□□□□ -1.44
GTF3C3-209ENST00000466862 RXRBP28702 533 aa6.08□□□□□ -1.44
GTF3C3-209ENST00000466862 AP3B2Q13367 1082 aa6.08□□□□□ -1.44
GTF3C3-209ENST00000466862 DSC3Q14574 896 aa6.08□□□□□ -1.44
GTF3C3-209ENST00000466862 HP1BP3Q5SSJ5 553 aaPredicted RBP6.08□□□□□ -1.44
GTF3C3-209ENST00000466862 PAOXQ6QHF9 649 aa6.08□□□□□ -1.44
GTF3C3-209ENST00000466862 PI16Q6UXB8 463 aa6.08□□□□□ -1.44
GTF3C3-209ENST00000466862 EPS8L3Q8TE67 593 aaKnown RBP6.08□□□□□ -1.44
GTF3C3-209ENST00000466862 CORO1BQ9BR76 489 aa6.08□□□□□ -1.44
GTF3C3-209ENST00000466862 TIMELESSQ9UNS1 1208 aa6.08□□□□□ -1.44
GTF3C3-209ENST00000466862 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.07□□□□□ -1.44
GTF3C3-209ENST00000466862 TMPRSS2O15393 492 aa6.07□□□□□ -1.44
GTF3C3-209ENST00000466862 AOC2O75106 756 aa6.07□□□□□ -1.44
GTF3C3-209ENST00000466862 PDZD3Q86UT5 571 aa6.07□□□□□ -1.44
GTF3C3-209ENST00000466862 FBXL6Q8N531 539 aa6.07□□□□□ -1.44
GTF3C3-209ENST00000466862 C1GALT1Q9NS00 363 aa6.07□□□□□ -1.44
GTF3C3-209ENST00000466862 FAM170BA6NMN3 283 aa6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 DYNC1LI2O43237 492 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 TREHO43280 583 aa6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 BRD1O95696 1058 aa6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 RAB6AP20340 208 aa6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 USP11P51784 963 aa6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 NFKBIBQ15653 356 aa6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 AKAP4Q5JQC9 854 aa6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 WDR89Q96FK6 387 aaPredicted RBP6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 METTL22Q9BUU2 404 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms