RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 TMPRSS13Q9BYE2 586 aa7.11□□□□□ -1.27
VPS13D-203ENST00000466732 OSBPL7Q9BZF2 842 aa7.11□□□□□ -1.27
VPS13D-203ENST00000466732 ZFYVE1Q9HBF4 777 aa7.11□□□□□ -1.27
VPS13D-203ENST00000466732 CYP11A1P05108 521 aa7.1□□□□□ -1.27
VPS13D-203ENST00000466732 CTSBP07858 339 aa7.1□□□□□ -1.27
VPS13D-203ENST00000466732 MAOBP27338 520 aa7.1□□□□□ -1.27
VPS13D-203ENST00000466732 ZNF157P51786 506 aaPredicted RBP7.1□□□□□ -1.27
VPS13D-203ENST00000466732 POU4F3Q15319 338 aa7.1□□□□□ -1.27
VPS13D-203ENST00000466732 EXOSC6Q5RKV6 272 aaKnown RBP7.1□□□□□ -1.27
VPS13D-203ENST00000466732 ANKRD34AQ69YU3 496 aa7.1□□□□□ -1.27
VPS13D-203ENST00000466732 FDX2Q6P4F2 183 aa7.1□□□□□ -1.27
VPS13D-203ENST00000466732 PRR23CQ6ZRP0 262 aa7.1□□□□□ -1.27
VPS13D-203ENST00000466732 GIPC1O14908 333 aa7.09□□□□□ -1.27
VPS13D-203ENST00000466732 SART1O43290 800 aaKnown RBP7.09□□□□□ -1.27
VPS13D-203ENST00000466732 ECEL1O95672 775 aa7.09□□□□□ -1.27
VPS13D-203ENST00000466732 PREPP48147 710 aa7.09□□□□□ -1.27
VPS13D-203ENST00000466732 UVSSAQ2YD98 709 aa7.09□□□□□ -1.27
VPS13D-203ENST00000466732 NUTM2GQ5VZR2 741 aa7.09□□□□□ -1.27
VPS13D-203ENST00000466732 NPAS4Q8IUM7 802 aa7.09□□□□□ -1.27
VPS13D-203ENST00000466732 HOMEZQ8IX15 550 aa7.09□□□□□ -1.27
VPS13D-203ENST00000466732 C3orf58Q8NDZ4 430 aa7.09□□□□□ -1.27
VPS13D-203ENST00000466732 SRCIN1Q9C0H9 1055 aa7.09□□□□□ -1.27
VPS13D-203ENST00000466732 SUGCTQ9HAC7 445 aa7.09□□□□□ -1.27
VPS13D-203ENST00000466732 SPG7Q9UQ90 795 aa7.09□□□□□ -1.27
VPS13D-203ENST00000466732 AKAP2Q9Y2D5 859 aa7.09□□□□□ -1.27
VPS13D-203ENST00000466732 PRPF40AO75400 957 aaKnown RBP7.08□□□□□ -1.28
VPS13D-203ENST00000466732 GSTT1P30711 240 aa7.08□□□□□ -1.28
VPS13D-203ENST00000466732 AP3B2Q13367 1082 aa7.08□□□□□ -1.28
VPS13D-203ENST00000466732 CCDC27Q2M243 656 aa7.08□□□□□ -1.28
VPS13D-203ENST00000466732 EAPPQ56P03 285 aaPredicted RBP7.08□□□□□ -1.28
VPS13D-203ENST00000466732 PRSS36Q5K4E3 855 aa7.08□□□□□ -1.28
VPS13D-203ENST00000466732 SMG8Q8ND04 991 aaKnown RBP7.08□□□□□ -1.28
VPS13D-203ENST00000466732 UTP4Q969X6 686 aaKnown RBP7.08□□□□□ -1.28
VPS13D-203ENST00000466732 MYRFLQ96LU7 910 aa7.08□□□□□ -1.28
VPS13D-203ENST00000466732 CORO1BQ9BR76 489 aa7.08□□□□□ -1.28
VPS13D-203ENST00000466732 C12orf49Q9H741 205 aa7.08□□□□□ -1.28
VPS13D-203ENST00000466732 CYP4F12Q9HCS2 524 aa7.08□□□□□ -1.28
VPS13D-203ENST00000466732 GPN3Q9UHW5 284 aaPredicted RBP7.08□□□□□ -1.28
VPS13D-203ENST00000466732 DHX15O43143 795 aaKnown RBP7.07□□□□□ -1.28
VPS13D-203ENST00000466732 TIAF1O95411 115 aa7.07□□□□□ -1.28
VPS13D-203ENST00000466732 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.07□□□□□ -1.28
VPS13D-203ENST00000466732 C12orf50Q8NA57 414 aaPredicted RBP7.07□□□□□ -1.28
VPS13D-203ENST00000466732 TMEM39AQ9NV64 488 aa7.07□□□□□ -1.28
VPS13D-203ENST00000466732 RAXQ9Y2V3 346 aa7.07□□□□□ -1.28
VPS13D-203ENST00000466732 PPP2R3AQ06190 1150 aa7.06□□□□□ -1.28
VPS13D-203ENST00000466732 HP1BP3Q5SSJ5 553 aaPredicted RBP7.06□□□□□ -1.28
VPS13D-203ENST00000466732 FRMD6Q96NE9 622 aa7.06□□□□□ -1.28
VPS13D-203ENST00000466732 RNF19AQ9NV58 838 aa7.06□□□□□ -1.28
VPS13D-203ENST00000466732 GAS2O43903 313 aaKnown RBP7.05□□□□□ -1.28
VPS13D-203ENST00000466732 BMP3P12645 472 aa7.05□□□□□ -1.28
VPS13D-203ENST00000466732 DRD2P14416 443 aa7.05□□□□□ -1.28
VPS13D-203ENST00000466732 GNA15P30679 374 aa7.05□□□□□ -1.28
VPS13D-203ENST00000466732 FGD1P98174 961 aa7.05□□□□□ -1.28
VPS13D-203ENST00000466732 FAM20CQ8IXL6 584 aa7.05□□□□□ -1.28
VPS13D-203ENST00000466732 DUSP9Q99956 384 aaKnown RBP7.05□□□□□ -1.28
VPS13D-203ENST00000466732 STOML1Q9UBI4 398 aa7.05□□□□□ -1.28
VPS13D-203ENST00000466732 FAM8A1Q9UBU6 413 aa7.05□□□□□ -1.28
VPS13D-203ENST00000466732 USP17L7P0C7H9 530 aa7.04□□□□□ -1.28
VPS13D-203ENST00000466732 SOX4Q06945 474 aaPredicted RBP7.04□□□□□ -1.28
VPS13D-203ENST00000466732 PDE3AQ14432 1141 aa7.04□□□□□ -1.28
VPS13D-203ENST00000466732 ZC3H12CQ9C0D7 883 aaKnown RBP7.04□□□□□ -1.28
VPS13D-203ENST00000466732 RAD18Q9NS91 495 aa7.04□□□□□ -1.28
VPS13D-203ENST00000466732 PPM1HQ9ULR3 514 aa7.04□□□□□ -1.28
VPS13D-203ENST00000466732 HIF3AQ9Y2N7 669 aa7.04□□□□□ -1.28
VPS13D-203ENST00000466732 ZBTB7CA1YPR0 619 aa7.03□□□□□ -1.28
VPS13D-203ENST00000466732 FBXO24O75426 580 aa7.03□□□□□ -1.28
VPS13D-203ENST00000466732 GSTP1P09211 210 aaKnown RBP7.03□□□□□ -1.28
VPS13D-203ENST00000466732 ADH5P11766 374 aa7.03□□□□□ -1.28
VPS13D-203ENST00000466732 FSTP19883 344 aa7.03□□□□□ -1.28
VPS13D-203ENST00000466732 EIF4BP23588 611 aaKnown RBP7.03□□□□□ -1.28
VPS13D-203ENST00000466732 SGO2Q562F6 1265 aa7.03□□□□□ -1.28
VPS13D-203ENST00000466732 TPTE2Q6XPS3 522 aa7.03□□□□□ -1.28
VPS13D-203ENST00000466732 FBXO33Q7Z6M2 555 aa7.03□□□□□ -1.28
VPS13D-203ENST00000466732 PDZD3Q86UT5 571 aa7.03□□□□□ -1.28
VPS13D-203ENST00000466732 SULF2Q8IWU5 870 aa7.03□□□□□ -1.28
VPS13D-203ENST00000466732 C2CD4AQ8NCU7 369 aaPredicted RBP7.03□□□□□ -1.28
VPS13D-203ENST00000466732 STK35Q8TDR2 534 aa7.03□□□□□ -1.28
VPS13D-203ENST00000466732 NECAB3Q96P71 396 aaPredicted RBP7.03□□□□□ -1.28
VPS13D-203ENST00000466732 KCNF1Q9H3M0 494 aa7.03□□□□□ -1.28
VPS13D-203ENST00000466732 CCDC86Q9H6F5 360 aaKnown RBP7.03□□□□□ -1.28
VPS13D-203ENST00000466732 C7orf69Q9H7B7 122 aa7.03□□□□□ -1.28
VPS13D-203ENST00000466732 ENC1O14682 589 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 AOC2O75106 756 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 LIG1P18858 919 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 ERCC3P19447 782 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 NME2P22392 152 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 MAP4P27816 1152 aaKnown RBP7.02□□□□□ -1.29
VPS13D-203ENST00000466732 AKAP4Q5JQC9 854 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 BEND4Q6ZU67 534 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 CLEC10AQ8IUN9 316 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 TRIM42Q8IWZ5 723 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 ANKRD24Q8TF21 1146 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 FAM83CQ9BQN1 747 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 WDR18Q9BV38 432 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 CEP44Q9C0F1 390 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 PARP2Q9UGN5 583 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 AK5Q9Y6K8 562 aa7.02□□□□□ -1.29
VPS13D-203ENST00000466732 HMX2A2RU54 273 aa7.01□□□□□ -1.29
VPS13D-203ENST00000466732 ZNF862O60290 1169 aa7.01□□□□□ -1.29
VPS13D-203ENST00000466732 ARNTP27540 789 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms