RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 HPS5Q9UPZ3 1129 aa19.06■□□□□ 0.64
SLX4-202ENST00000466154 ZSCAN25Q6NSZ9 544 aa19.06■□□□□ 0.64
SLX4-202ENST00000466154 AOPEPQ8N6M6 819 aa19.06■□□□□ 0.64
SLX4-202ENST00000466154 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.06■□□□□ 0.64
SLX4-202ENST00000466154 MRPS27Q92552 414 aaKnown RBP19.06■□□□□ 0.64
SLX4-202ENST00000466154 KIF28PB7ZC32 967 aa19.05■□□□□ 0.64
SLX4-202ENST00000466154 MBD4O95243 580 aa19.05■□□□□ 0.64
SLX4-202ENST00000466154 ATP6V1AP38606 617 aa19.05■□□□□ 0.64
SLX4-202ENST00000466154 KCNQ4P56696 695 aa19.05■□□□□ 0.64
SLX4-202ENST00000466154 FAM160A1Q05DH4 1040 aa19.05■□□□□ 0.64
SLX4-202ENST00000466154 ARID5BQ14865 1188 aa19.05■□□□□ 0.64
SLX4-202ENST00000466154 ZNF592Q92610 1267 aa19.05■□□□□ 0.64
SLX4-202ENST00000466154 STX1AQ16623 288 aa19.05■□□□□ 0.64
SLX4-202ENST00000466154 ALG1Q9BT22 464 aa19.05■□□□□ 0.64
SLX4-202ENST00000466154 NAPBQ9H115 298 aa19.05■□□□□ 0.64
SLX4-202ENST00000466154 ATP2B1P20020 1258 aa19.04■□□□□ 0.64
SLX4-202ENST00000466154 SNW1Q13573 536 aaKnown RBP19.04■□□□□ 0.64
SLX4-202ENST00000466154 ABCF2Q9UG63 623 aa19.04■□□□□ 0.64
SLX4-202ENST00000466154 LAMB4A4D0S4 1761 aa19.04■□□□□ 0.64
SLX4-202ENST00000466154 PRKAB2O43741 272 aa19.04■□□□□ 0.64
SLX4-202ENST00000466154 CHAF1AQ13111 956 aaPredicted RBP19.04■□□□□ 0.64
SLX4-202ENST00000466154 SUSD4Q5VX71 490 aa19.04■□□□□ 0.64
SLX4-202ENST00000466154 BICDL1Q6ZP65 573 aa19.04■□□□□ 0.64
SLX4-202ENST00000466154 CMTR1Q8N1G2 835 aaKnown RBP19.04■□□□□ 0.64
SLX4-202ENST00000466154 KIAA1524Q8TCG1 905 aa19.04■□□□□ 0.64
SLX4-202ENST00000466154 RIC1Q4ADV7 1423 aa19.04■□□□□ 0.64
SLX4-202ENST00000466154 SALL1Q9NSC2 1324 aa19.04■□□□□ 0.64
SLX4-202ENST00000466154 SPTLC2O15270 562 aa19.04■□□□□ 0.64
SLX4-202ENST00000466154 BCAMP50895 628 aa19.04■□□□□ 0.64
SLX4-202ENST00000466154 TMEM67Q5HYA8 995 aa19.04■□□□□ 0.64
SLX4-202ENST00000466154 FBXO18Q8NFZ0 1043 aa19.04■□□□□ 0.64
SLX4-202ENST00000466154 TDO2P48775 406 aa19.03■□□□□ 0.64
SLX4-202ENST00000466154 TTF1Q15361 905 aaPredicted RBP19.03■□□□□ 0.64
SLX4-202ENST00000466154 SMIM5Q71RC9 77 aa19.03■□□□□ 0.64
SLX4-202ENST00000466154 NBPF3Q9H094 633 aa19.03■□□□□ 0.64
SLX4-202ENST00000466154 ANGEL1Q9UNK9 670 aaKnown RBP19.03■□□□□ 0.64
SLX4-202ENST00000466154 PARP4Q9UKK3 1724 aaKnown RBP19.03■□□□□ 0.64
SLX4-202ENST00000466154 PLA2G12BQ9BX93 195 aa19.03■□□□□ 0.64
SLX4-202ENST00000466154 TNS2Q63HR2 1409 aa19.03■□□□□ 0.64
SLX4-202ENST00000466154 NEDD4P46934 1319 aa19.03■□□□□ 0.64
SLX4-202ENST00000466154 IFIT3O14879 490 aaKnown RBP19.02■□□□□ 0.64
SLX4-202ENST00000466154 PUM3Q15397 648 aaKnown RBP19.02■□□□□ 0.64
SLX4-202ENST00000466154 CCDC144BQ3MJ40 725 aa19.02■□□□□ 0.64
SLX4-202ENST00000466154 MYSM1Q5VVJ2 828 aa19.02■□□□□ 0.64
SLX4-202ENST00000466154 SPATA5Q8NB90 893 aa19.02■□□□□ 0.64
SLX4-202ENST00000466154 TJP1Q07157 1748 aa19.02■□□□□ 0.64
SLX4-202ENST00000466154 RASGRF1Q13972 1273 aa19.02■□□□□ 0.64
SLX4-202ENST00000466154 TDRD7Q8NHU6 1098 aaKnown RBP19.02■□□□□ 0.64
SLX4-202ENST00000466154 LRP2BPQ9P2M1 347 aa19.02■□□□□ 0.64
SLX4-202ENST00000466154 FBXO3Q9UK99 471 aa19.02■□□□□ 0.64
SLX4-202ENST00000466154 GOLGA8AA7E2F4 631 aa19.02■□□□□ 0.63
SLX4-202ENST00000466154 SLC5A1P13866 664 aa19.02■□□□□ 0.63
SLX4-202ENST00000466154 CDC27P30260 824 aa19.02■□□□□ 0.63
SLX4-202ENST00000466154 LINC00301Q8NCQ3 95 aa19.02■□□□□ 0.63
SLX4-202ENST00000466154 SLC26A6Q9BXS9 759 aa19.02■□□□□ 0.63
SLX4-202ENST00000466154 NIP7Q9Y221 180 aaKnown RBP eCLIP19.02■□□□□ 0.63
SLX4-202ENST00000466154 NUP133Q8WUM0 1156 aa19.01■□□□□ 0.63
SLX4-202ENST00000466154 RBM43Q6ZSC3 357 aaKnown RBP19.01■□□□□ 0.63
SLX4-202ENST00000466154 CEP57L1Q8IYX8 460 aa19.01■□□□□ 0.63
SLX4-202ENST00000466154 LPIN2Q92539 896 aa19.01■□□□□ 0.63
SLX4-202ENST00000466154 ANO10Q9NW15 660 aa19.01■□□□□ 0.63
SLX4-202ENST00000466154 MINDY4BA8MYZ0 360 aa19■□□□□ 0.63
SLX4-202ENST00000466154 ZBTB43O43298 467 aa19■□□□□ 0.63
SLX4-202ENST00000466154 MAP3K12Q12852 859 aa19■□□□□ 0.63
SLX4-202ENST00000466154 SPECC1Q5M775 1068 aa19■□□□□ 0.63
SLX4-202ENST00000466154 CPLX2Q6PUV4 134 aaKnown RBP19■□□□□ 0.63
SLX4-202ENST00000466154 CTAGE5O15320 804 aa19■□□□□ 0.63
SLX4-202ENST00000466154 SMC2O95347 1197 aa19■□□□□ 0.63
SLX4-202ENST00000466154 TPM3P06753 285 aa19■□□□□ 0.63
SLX4-202ENST00000466154 TRIM29Q14134 588 aa19■□□□□ 0.63
SLX4-202ENST00000466154 CACTINQ8WUQ7 758 aaKnown RBP19■□□□□ 0.63
SLX4-202ENST00000466154 CHMP4CQ96CF2 233 aa19■□□□□ 0.63
SLX4-202ENST00000466154 LAMA4Q16363 1823 aa19■□□□□ 0.63
SLX4-202ENST00000466154 CCDC69A6NI79 296 aa19■□□□□ 0.63
SLX4-202ENST00000466154 TPD52L1Q16890 204 aaPredicted RBP19■□□□□ 0.63
SLX4-202ENST00000466154 VGLL2Q8N8G2 317 aa19■□□□□ 0.63
SLX4-202ENST00000466154 RTEL1Q9NZ71 1219 aa19■□□□□ 0.63
SLX4-202ENST00000466154 CDHR2Q9BYE9 1310 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 WTIPA6NIX2 430 aaPredicted RBP18.99■□□□□ 0.63
SLX4-202ENST00000466154 DYNC1I1O14576 645 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 APOA5Q6Q788 366 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 TRMT1Q9NXH9 659 aaKnown RBP18.99■□□□□ 0.63
SLX4-202ENST00000466154 SLC12A7Q9Y666 1083 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 SLC4A4Q9Y6R1 1079 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 NUP188Q5SRE5 1749 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 IARSP41252 1262 aaKnown RBP18.99■□□□□ 0.63
SLX4-202ENST00000466154 CRKLP46109 303 aaKnown RBP18.99■□□□□ 0.63
SLX4-202ENST00000466154 TERF1P54274 439 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 IQCB1Q15051 598 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 DPCR1Q3MIW9 517 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 ANO1Q5XXA6 986 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 KRT40Q6A162 431 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 ADALQ6DHV7 355 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 PLA2G4DQ86XP0 818 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 VPS37DQ86XT2 251 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 ABCC6O95255 1503 aa18.99■□□□□ 0.63
SLX4-202ENST00000466154 KIF23Q02241 960 aaPredicted RBP18.98■□□□□ 0.63
SLX4-202ENST00000466154 ENGASEQ8NFI3 743 aa18.98■□□□□ 0.63
SLX4-202ENST00000466154 MYRIPQ8NFW9 859 aa18.98■□□□□ 0.63
SLX4-202ENST00000466154 CLIC6Q96NY7 704 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms