RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 ABCB6Q9NP58 842 aa10.54□□□□□ -0.72
SSB-207ENST00000465871 BIN2Q9UBW5 565 aaPredicted RBP10.54□□□□□ -0.72
SSB-207ENST00000465871 CD97P48960 835 aa10.53□□□□□ -0.72
SSB-207ENST00000465871 DCTN4Q9UJW0 460 aa10.53□□□□□ -0.72
SSB-207ENST00000465871 TGFB1P01137 390 aa10.52□□□□□ -0.73
SSB-207ENST00000465871 CYP11A1P05108 521 aa10.52□□□□□ -0.73
SSB-207ENST00000465871 PTPN12Q05209 780 aaKnown RBP10.52□□□□□ -0.73
SSB-207ENST00000465871 SGO2Q562F6 1265 aa10.52□□□□□ -0.73
SSB-207ENST00000465871 TMC7Q7Z402 723 aa10.52□□□□□ -0.73
SSB-207ENST00000465871 GADD45BO75293 160 aaPredicted RBP10.51□□□□□ -0.73
SSB-207ENST00000465871 MAOBP27338 520 aa10.51□□□□□ -0.73
SSB-207ENST00000465871 MAP4P27816 1152 aaKnown RBP10.51□□□□□ -0.73
SSB-207ENST00000465871 POU4F3Q15319 338 aa10.51□□□□□ -0.73
SSB-207ENST00000465871 HP1BP3Q5SSJ5 553 aaPredicted RBP10.51□□□□□ -0.73
SSB-207ENST00000465871 DDX54Q8TDD1 881 aaKnown RBP10.51□□□□□ -0.73
SSB-207ENST00000465871 TRIM56Q9BRZ2 755 aaKnown RBP10.51□□□□□ -0.73
SSB-207ENST00000465871 PCMTD2Q9NV79 361 aa10.51□□□□□ -0.73
SSB-207ENST00000465871 SSTR4P31391 388 aa10.5□□□□□ -0.73
SSB-207ENST00000465871 TRAK1Q9UPV9 953 aa10.5□□□□□ -0.73
SSB-207ENST00000465871 COBLO75128 1261 aa10.49□□□□□ -0.73
SSB-207ENST00000465871 CTSBP07858 339 aa10.49□□□□□ -0.73
SSB-207ENST00000465871 DRD2P14416 443 aa10.49□□□□□ -0.73
SSB-207ENST00000465871 C2CD4AQ8NCU7 369 aaPredicted RBP10.49□□□□□ -0.73
SSB-207ENST00000465871 ZFYVE1Q9HBF4 777 aa10.49□□□□□ -0.73
SSB-207ENST00000465871 ADH5P11766 374 aa10.48□□□□□ -0.73
SSB-207ENST00000465871 RXRBP28702 533 aa10.48□□□□□ -0.73
SSB-207ENST00000465871 SOX4Q06945 474 aaPredicted RBP10.48□□□□□ -0.73
SSB-207ENST00000465871 GRM2Q14416 872 aa10.48□□□□□ -0.73
SSB-207ENST00000465871 GLIS3Q8NEA6 775 aa10.48□□□□□ -0.73
SSB-207ENST00000465871 CORO1BQ9BR76 489 aa10.48□□□□□ -0.73
SSB-207ENST00000465871 TMEM238LA0A1B0GVL6 79 aa10.47□□□□□ -0.73
SSB-207ENST00000465871 KIAA1324LA8MWY0 1029 aaPredicted RBP10.47□□□□□ -0.73
SSB-207ENST00000465871 RPS26P11Q5JNZ5 115 aaPredicted RBP10.47□□□□□ -0.73
SSB-207ENST00000465871 SHKBP1Q8TBC3 707 aa10.47□□□□□ -0.73
SSB-207ENST00000465871 EPS8L3Q8TE67 593 aaKnown RBP10.47□□□□□ -0.73
SSB-207ENST00000465871 PRR19A6NJB7 356 aa10.46□□□□□ -0.73
SSB-207ENST00000465871 MAPK1P28482 360 aa10.46□□□□□ -0.73
SSB-207ENST00000465871 GRIK1P39086 918 aa10.46□□□□□ -0.73
SSB-207ENST00000465871 USP11P51784 963 aa10.46□□□□□ -0.73
SSB-207ENST00000465871 AP3B2Q13367 1082 aa10.46□□□□□ -0.73
SSB-207ENST00000465871 ECEL1O95672 775 aa10.45□□□□□ -0.74
SSB-207ENST00000465871 CDPF1Q6NVV7 123 aa10.45□□□□□ -0.74
SSB-207ENST00000465871 INTS5Q6P9B9 1019 aaKnown RBP10.45□□□□□ -0.74
SSB-207ENST00000465871 MFSD14AQ96MC6 490 aa10.45□□□□□ -0.74
SSB-207ENST00000465871 YIPF2Q9BWQ6 316 aa10.45□□□□□ -0.74
SSB-207ENST00000465871 FAM95CA0A1B0GW59 222 aa10.44□□□□□ -0.74
SSB-207ENST00000465871 TREHO43280 583 aa10.44□□□□□ -0.74
SSB-207ENST00000465871 MED26O95402 600 aa10.44□□□□□ -0.74
SSB-207ENST00000465871 DSC3Q14574 896 aa10.44□□□□□ -0.74
SSB-207ENST00000465871 FBLIM1Q8WUP2 373 aa10.44□□□□□ -0.74
SSB-207ENST00000465871 NLRP2Q9NX02 1062 aa10.44□□□□□ -0.74
SSB-207ENST00000465871 ACTL7BQ9Y614 415 aa10.44□□□□□ -0.74
SSB-207ENST00000465871 PAOXQ6QHF9 649 aa10.43□□□□□ -0.74
SSB-207ENST00000465871 PI16Q6UXB8 463 aa10.43□□□□□ -0.74
SSB-207ENST00000465871 EZH1Q92800 747 aaPredicted RBP10.43□□□□□ -0.74
SSB-207ENST00000465871 IVNS1ABPQ9Y6Y0 642 aa10.43□□□□□ -0.74
SSB-207ENST00000465871 PNMA6FA0A0J9YX94 578 aa10.42□□□□□ -0.74
SSB-207ENST00000465871 WDR64B1ANS9 1081 aa10.42□□□□□ -0.74
SSB-207ENST00000465871 KCNA1Q09470 495 aa10.42□□□□□ -0.74
SSB-207ENST00000465871 FAAP100Q0VG06 881 aa10.42□□□□□ -0.74
SSB-207ENST00000465871 NFKBIBQ15653 356 aa10.42□□□□□ -0.74
SSB-207ENST00000465871 AKAP4Q5JQC9 854 aa10.42□□□□□ -0.74
SSB-207ENST00000465871 DTHD1Q6ZMT9 781 aa10.42□□□□□ -0.74
SSB-207ENST00000465871 GIMAP7Q8NHV1 300 aa10.42□□□□□ -0.74
SSB-207ENST00000465871 RAD18Q9NS91 495 aa10.42□□□□□ -0.74
SSB-207ENST00000465871 SPINK2P20155 84 aa10.41□□□□□ -0.74
SSB-207ENST00000465871 FCGRTP55899 365 aa10.41□□□□□ -0.74
SSB-207ENST00000465871 PDE3AQ14432 1141 aa10.41□□□□□ -0.74
SSB-207ENST00000465871 ENOX2Q16206 610 aaKnown RBP10.41□□□□□ -0.74
SSB-207ENST00000465871 BCO2Q9BYV7 579 aa10.41□□□□□ -0.74
SSB-207ENST00000465871 AP4E1Q9UPM8 1137 aa10.41□□□□□ -0.74
SSB-207ENST00000465871 SYNGAP1Q96PV0 1343 aa10.4□□□□□ -0.74
SSB-207ENST00000465871 F13BP05160 661 aa10.4□□□□□ -0.74
SSB-207ENST00000465871 PLCB3Q01970 1234 aa10.4□□□□□ -0.74
SSB-207ENST00000465871 CPSF6Q16630 551 aaKnown RBP eCLIP10.4□□□□□ -0.742e-7■□□□□ 9.4
SSB-207ENST00000465871 FBXL6Q8N531 539 aa10.4□□□□□ -0.74
SSB-207ENST00000465871 PPP4R2Q9NY27 417 aa10.4□□□□□ -0.74
SSB-207ENST00000465871 AOC2O75106 756 aa10.39□□□□□ -0.75
SSB-207ENST00000465871 XRCC5P13010 732 aaKnown RBP10.39□□□□□ -0.75
SSB-207ENST00000465871 ZNF157P51786 506 aaPredicted RBP10.39□□□□□ -0.75
SSB-207ENST00000465871 DYMQ7RTS9 669 aa10.39□□□□□ -0.75
SSB-207ENST00000465871 WDR18Q9BV38 432 aa10.39□□□□□ -0.75
SSB-207ENST00000465871 ATG3Q9NT62 314 aa10.39□□□□□ -0.75
SSB-207ENST00000465871 PIM2Q9P1W9 311 aa10.39□□□□□ -0.75
SSB-207ENST00000465871 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.38□□□□□ -0.75
SSB-207ENST00000465871 RAB6AP20340 208 aa10.38□□□□□ -0.75
SSB-207ENST00000465871 DTX1Q86Y01 620 aa10.38□□□□□ -0.75
SSB-207ENST00000465871 GSX1Q9H4S2 264 aaPredicted RBP10.38□□□□□ -0.75
SSB-207ENST00000465871 FAM105AQ9NUU6 356 aa10.38□□□□□ -0.75
SSB-207ENST00000465871 PRKAG2Q9UGJ0 569 aa10.38□□□□□ -0.75
SSB-207ENST00000465871 GPN3Q9UHW5 284 aaPredicted RBP10.38□□□□□ -0.75
SSB-207ENST00000465871 MAP7Q14244 749 aa10.37□□□□□ -0.75
SSB-207ENST00000465871 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.37□□□□□ -0.75
SSB-207ENST00000465871 ZSCAN29Q8IWY8 852 aaPredicted RBP10.37□□□□□ -0.75
SSB-207ENST00000465871 METTL22Q9BUU2 404 aaPredicted RBP10.37□□□□□ -0.75
SSB-207ENST00000465871 OSBPL1AQ9BXW6 950 aa10.37□□□□□ -0.75
SSB-207ENST00000465871 SEMA6CQ9H3T2 930 aa10.37□□□□□ -0.75
SSB-207ENST00000465871 ACSS3Q9H6R3 686 aa10.37□□□□□ -0.75
SSB-207ENST00000465871 PPP2R3AQ06190 1150 aa10.36□□□□□ -0.75
SSB-207ENST00000465871 FMR1Q06787 632 aaKnown RBP eCLIP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms