RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ZSWIM4Q9H7M6 989 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 HELLSQ9NRZ9 838 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 POLR3EQ9NVU0 708 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 FOXN1O15353 648 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 TEX35Q5T0J7 233 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 ATG9AQ7Z3C6 839 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 STK11IPQ8N1F8 1099 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 PDILTQ8N807 584 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 NRDCO43847 1150 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 TBC1D8O95759 1140 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 CDC27P30260 824 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 ZFP91Q96JP5 570 aaPredicted RBP14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 INTS13Q9NVM9 706 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 UBE2Q2LH0YL09 131 aa14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 FOXP2O15409 715 aa14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 PRC1O43663 620 aa14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 SYKP43405 635 aa14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 ADKP55263 362 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 GNG11P61952 73 aa14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 PDE4BQ07343 736 aa14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 RABL6Q3YEC7 729 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 IRX2Q9BZI1 471 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 PHLPP2Q6ZVD8 1323 aa14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 CPLX1O14810 134 aa14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 YEATS4O95619 227 aa14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 IFIT1P09914 478 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 CMA1P23946 247 aa14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 KIF23Q02241 960 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 SHC4Q6S5L8 630 aa14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 LRP10Q7Z4F1 713 aa14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 DESI2Q9BSY9 194 aa14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 PPP2R2CQ9Y2T4 447 aa14.54□□□□□ -0.08
CLCNKA-204ENST00000464764 RNF113AO15541 343 aaKnown RBP14.53□□□□□ -0.08
CLCNKA-204ENST00000464764 TOP1P11387 765 aaKnown RBP14.53□□□□□ -0.08
CLCNKA-204ENST00000464764 OAS2P29728 719 aaKnown RBP14.53□□□□□ -0.08
CLCNKA-204ENST00000464764 WASHC4Q2M389 1173 aa14.53□□□□□ -0.08
CLCNKA-204ENST00000464764 TOGARAM2Q6ZUX3 1019 aa14.53□□□□□ -0.08
CLCNKA-204ENST00000464764 PUS3Q9BZE2 481 aaKnown RBP14.53□□□□□ -0.08
CLCNKA-204ENST00000464764 ARGLU1Q9NWB6 273 aaPredicted RBP14.53□□□□□ -0.08
CLCNKA-204ENST00000464764 SLIT1O75093 1534 aa14.53□□□□□ -0.08
CLCNKA-204ENST00000464764 ANTXR2P58335 489 aa14.53□□□□□ -0.08
CLCNKA-204ENST00000464764 TMEM139Q8IV31 216 aa14.53□□□□□ -0.08
CLCNKA-204ENST00000464764 LTN1O94822 1766 aa14.53□□□□□ -0.08
CLCNKA-204ENST00000464764 TULP2O00295 520 aa14.52□□□□□ -0.08
CLCNKA-204ENST00000464764 FGAP02671 866 aa14.52□□□□□ -0.08
CLCNKA-204ENST00000464764 BMP6P22004 513 aa14.52□□□□□ -0.08
CLCNKA-204ENST00000464764 LRRFIP1Q32MZ4 808 aaKnown RBP14.52□□□□□ -0.08
CLCNKA-204ENST00000464764 ARHGEF25Q86VW2 580 aa14.52□□□□□ -0.08
CLCNKA-204ENST00000464764 VSTM4Q8IW00 320 aa14.52□□□□□ -0.08
CLCNKA-204ENST00000464764 MRC1P22897 1456 aa14.52□□□□□ -0.08
CLCNKA-204ENST00000464764 ABCC6O95255 1503 aa14.52□□□□□ -0.08
CLCNKA-204ENST00000464764 KCNJ6P48051 423 aa14.52□□□□□ -0.08
CLCNKA-204ENST00000464764 MYL5Q02045 173 aa14.52□□□□□ -0.08
CLCNKA-204ENST00000464764 KARSQ15046 597 aaKnown RBP14.52□□□□□ -0.08
CLCNKA-204ENST00000464764 LONRF3Q496Y0 759 aa14.52□□□□□ -0.08
CLCNKA-204ENST00000464764 CC2D1AQ6P1N0 951 aaPredicted RBP14.52□□□□□ -0.08
CLCNKA-204ENST00000464764 PHKBQ93100 1093 aa14.52□□□□□ -0.08
CLCNKA-204ENST00000464764 LAMA4Q16363 1823 aa14.52□□□□□ -0.09
CLCNKA-204ENST00000464764 A0A0U1RQJ8 604 aa14.52□□□□□ -0.09
CLCNKA-204ENST00000464764 EFCAB8A8MWE9 144 aa14.52□□□□□ -0.09
CLCNKA-204ENST00000464764 IKBKBO14920 756 aa14.52□□□□□ -0.09
CLCNKA-204ENST00000464764 CASP7P55210 303 aa14.52□□□□□ -0.09
CLCNKA-204ENST00000464764 FOXO4P98177 505 aa14.52□□□□□ -0.09
CLCNKA-204ENST00000464764 RAD51AP2Q09MP3 1159 aa14.52□□□□□ -0.09
CLCNKA-204ENST00000464764 PI16Q6UXB8 463 aa14.52□□□□□ -0.09
CLCNKA-204ENST00000464764 ATRIPQ8WXE1 791 aa14.52□□□□□ -0.09
CLCNKA-204ENST00000464764 CCDC85AQ96PX6 553 aaPredicted RBP14.52□□□□□ -0.09
CLCNKA-204ENST00000464764 SMC1AQ14683 1233 aaKnown RBP14.51□□□□□ -0.09
CLCNKA-204ENST00000464764 SLC39A14Q15043 492 aa14.51□□□□□ -0.09
CLCNKA-204ENST00000464764 KRBA2Q6ZNG9 492 aa14.51□□□□□ -0.09
CLCNKA-204ENST00000464764 KCNH5Q8NCM2 988 aa14.51□□□□□ -0.09
CLCNKA-204ENST00000464764 PARD6BQ9BYG5 372 aa14.51□□□□□ -0.09
CLCNKA-204ENST00000464764 SLC52A2Q9HAB3 445 aa14.51□□□□□ -0.09
CLCNKA-204ENST00000464764 SENP2Q9HC62 589 aa14.51□□□□□ -0.09
CLCNKA-204ENST00000464764 ZC3H6P61129 1189 aaKnown RBP14.51□□□□□ -0.09
CLCNKA-204ENST00000464764 MTF1Q14872 753 aa14.51□□□□□ -0.09
CLCNKA-204ENST00000464764 ZNF827Q17R98 1081 aa14.51□□□□□ -0.09
CLCNKA-204ENST00000464764 METTL16Q86W50 562 aaKnown RBP14.51□□□□□ -0.09
CLCNKA-204ENST00000464764 ORAI2Q96SN7 254 aa14.51□□□□□ -0.09
CLCNKA-204ENST00000464764 PCDHA5Q9Y5H7 936 aa14.51□□□□□ -0.09
CLCNKA-204ENST00000464764 A0A1B0GUL7 405 aa14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 ADORA1P30542 326 aa14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 CASQ1P31415 396 aa14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 TRMT44Q8IYL2 757 aaKnown RBP14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 TUBE1Q9UJT0 475 aa14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 NFAT5O94916 1531 aa14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 TFRCP02786 760 aaKnown RBP14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 PPP2R3AQ06190 1150 aa14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 DHX58Q96C10 678 aa14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 PUS7LQ9H0K6 701 aaKnown RBP14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 MYH15Q9Y2K3 1946 aa14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 SCARF1Q14162 830 aa14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 BRAPQ7Z569 592 aa14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 VPS37DQ86XT2 251 aa14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 BAG1Q99933 345 aaPredicted RBP14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 TRIM34Q9BYJ4 488 aa14.5□□□□□ -0.09
CLCNKA-204ENST00000464764 RFX7Q2KHR2 1363 aa14.49□□□□□ -0.09
CLCNKA-204ENST00000464764 MAP3K9P80192 1104 aa14.49□□□□□ -0.09
CLCNKA-204ENST00000464764 CCDC158Q5M9N0 1113 aa14.49□□□□□ -0.09
CLCNKA-204ENST00000464764 MB21D2Q8IYB1 491 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms