RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 KRT23Q9C075 422 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 GJB4Q9NTQ9 266 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 TCP11L1Q9NUJ3 509 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 GOLGA6L10A6NI86 522 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 C6orf229H3BNL8 230 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 ARID5AQ03989 594 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 SCRN1Q12765 414 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 BRAPQ7Z569 592 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 KRI1Q8N9T8 703 aaKnown RBP10.36□□□□□ -0.75
HPS4-208ENST00000464362 SMARCC1Q92922 1105 aaPredicted RBP10.36□□□□□ -0.75
HPS4-208ENST00000464362 UIMC1Q96RL1 719 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 CDC5LQ99459 802 aaKnown RBP10.36□□□□□ -0.75
HPS4-208ENST00000464362 HELLSQ9NRZ9 838 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 NFE2L3Q9Y4A8 694 aa10.36□□□□□ -0.75
HPS4-208ENST00000464362 PREX2Q70Z35 1606 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 KIF24Q5T7B8 1368 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 FAM135BQ49AJ0 1406 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 F8W031 263 aaPredicted RBP10.35□□□□□ -0.75
HPS4-208ENST00000464362 ZNF76P36508 570 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 STAT6P42226 847 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 GOLGA8FQ08AF8 430 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 GOLGA8DPQ0D2H9 430 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 PNOCQ13519 176 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 ERCC6LQ2NKX8 1250 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 PI4K2BQ8TCG2 481 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 APPBP2Q92624 585 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 LUC7LQ9NQ29 371 aaKnown RBP10.35□□□□□ -0.75
HPS4-208ENST00000464362 MRVI1Q9Y6F6 885 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 PLXNC1O60486 1568 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 SASH1O94885 1247 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 HSPD1P10809 573 aaKnown RBP10.35□□□□□ -0.75
HPS4-208ENST00000464362 IL2RBP14784 551 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 ATP6V1AP38606 617 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 CDR1P51861 262 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 HLTFQ14527 1009 aaKnown RBP eCLIP10.35□□□□□ -0.75
HPS4-208ENST00000464362 BAG1Q99933 345 aaPredicted RBP10.35□□□□□ -0.75
HPS4-208ENST00000464362 KIAA0754O94854 1291 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 CCDC175P0C221 793 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 ARID5BQ14865 1188 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 DNAJC21Q5F1R6 531 aaKnown RBP10.35□□□□□ -0.75
HPS4-208ENST00000464362 CACTINQ8WUQ7 758 aaKnown RBP10.35□□□□□ -0.75
HPS4-208ENST00000464362 CLIC6Q96NY7 704 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 GBP3Q9H0R5 595 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 C19orf44Q9H6X5 657 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 CALCOCO1Q9P1Z2 691 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 BCCIPQ9P287 314 aaKnown RBP eCLIP10.35□□□□□ -0.75
HPS4-208ENST00000464362 ARHGEF10O15013 1369 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 TMEM2Q9UHN6 1383 aa10.35□□□□□ -0.75
HPS4-208ENST00000464362 RIMBP3CA6NJZ7 1639 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 RIMBP3BA6NNM3 1639 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 MYOM2P54296 1465 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 MYSM1Q5VVJ2 828 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 TAF4BQ92750 862 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 TEX13AQ9BXU3 409 aaPredicted RBP10.34□□□□□ -0.75
HPS4-208ENST00000464362 RIMBP3Q9UFD9 1639 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 FBXO3Q9UK99 471 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 V9GY48 417 aaPredicted RBP10.34□□□□□ -0.75
HPS4-208ENST00000464362 IGSF1Q8N6C5 1336 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 FAM170AA1A519 330 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 ADKP55263 362 aaKnown RBP10.34□□□□□ -0.75
HPS4-208ENST00000464362 MTX1Q13505 466 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 SYCP1Q15431 976 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 KANK3Q6NY19 840 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 DESI2Q9BSY9 194 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 PCDHA7Q9UN72 937 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 ADORA1P30542 326 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 PAFAH1B1P43034 410 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 PDE4BQ07343 736 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 CCDC152Q4G0S7 254 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 CCDC40Q4G0X9 1142 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 C11orf57Q6ZUT1 292 aaPredicted RBP10.34□□□□□ -0.75
HPS4-208ENST00000464362 BABAM1Q9NWV8 329 aa10.34□□□□□ -0.75
HPS4-208ENST00000464362 ELP1O95163 1332 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 FGAP02671 866 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 NDUFA8P51970 172 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 ASIC1P78348 528 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 ANKRD18AQ8IVF6 992 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 SRRTQ9BXP5 876 aaKnown RBP10.33□□□□□ -0.76
HPS4-208ENST00000464362 CCDC113Q9H0I3 377 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 MMRN2Q9H8L6 949 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 MCM9Q9NXL9 1143 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 ZNF532Q9HCE3 1301 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 CTAGE15A4D2H0 777 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 GOLGA6L9A6NEM1 432 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 TMCO5BA8MYB1 307 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 CHGBP05060 677 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 CTAGE8P0CG41 777 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 NOP2P46087 812 aaKnown RBP10.33□□□□□ -0.76
HPS4-208ENST00000464362 CTR9Q6PD62 1173 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 CTAGE6Q86UF2 777 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 CTAGE4Q8IX94 777 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 RABEP2Q9H5N1 569 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 CNNM2Q9H8M5 875 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 CLIC4Q9Y696 253 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 CLTCL1P53675 1640 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 COBLO75128 1261 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 CRACR2BQ8N4Y2 399 aaPredicted RBP10.33□□□□□ -0.76
HPS4-208ENST00000464362 KIAA1468Q9P260 1216 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 MAGEB6P1A0A0J9YX57 407 aa10.33□□□□□ -0.76
HPS4-208ENST00000464362 USO1O60763 962 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms