RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 SHKBP1Q8TBC3 707 aa8.13□□□□□ -1.11
ITGB1-208ENST00000464001 PSMG3-AS1Q96PY0 264 aa8.13□□□□□ -1.11
ITGB1-208ENST00000464001 NPHS2Q9NP85 383 aa8.13□□□□□ -1.11
ITGB1-208ENST00000464001 KIAA1324LA8MWY0 1029 aaPredicted RBP8.12□□□□□ -1.11
ITGB1-208ENST00000464001 EIF1AYO14602 144 aaKnown RBP8.12□□□□□ -1.11
ITGB1-208ENST00000464001 ITPKAP23677 461 aa8.12□□□□□ -1.11
ITGB1-208ENST00000464001 MAOBP27338 520 aa8.12□□□□□ -1.11
ITGB1-208ENST00000464001 SOX4Q06945 474 aaPredicted RBP8.12□□□□□ -1.11
ITGB1-208ENST00000464001 CCDC74AQ96AQ1 378 aa8.12□□□□□ -1.11
ITGB1-208ENST00000464001 YIPF2Q9BWQ6 316 aa8.12□□□□□ -1.11
ITGB1-208ENST00000464001 NRSN2Q9GZP1 204 aa8.12□□□□□ -1.11
ITGB1-208ENST00000464001 FAM95CA0A1B0GW59 222 aa8.11□□□□□ -1.11
ITGB1-208ENST00000464001 PRR19A6NJB7 356 aa8.11□□□□□ -1.11
ITGB1-208ENST00000464001 SOWAHDA6NJG2 315 aa8.11□□□□□ -1.11
ITGB1-208ENST00000464001 WDR64B1ANS9 1081 aa8.11□□□□□ -1.11
ITGB1-208ENST00000464001 GPR182O15218 404 aa8.11□□□□□ -1.11
ITGB1-208ENST00000464001 GADD45BO75293 160 aaPredicted RBP8.11□□□□□ -1.11
ITGB1-208ENST00000464001 MED26O95402 600 aa8.11□□□□□ -1.11
ITGB1-208ENST00000464001 B3GALT4O96024 378 aa8.11□□□□□ -1.11
ITGB1-208ENST00000464001 DRD2P14416 443 aa8.11□□□□□ -1.11
ITGB1-208ENST00000464001 PTPN12Q05209 780 aaKnown RBP8.11□□□□□ -1.11
ITGB1-208ENST00000464001 PAOXQ6QHF9 649 aa8.11□□□□□ -1.11
ITGB1-208ENST00000464001 CSRNP1Q96S65 589 aa8.11□□□□□ -1.11
ITGB1-208ENST00000464001 CORO1BQ9BR76 489 aa8.11□□□□□ -1.11
ITGB1-208ENST00000464001 RBCK1Q9BYM8 510 aa8.11□□□□□ -1.11
ITGB1-208ENST00000464001 ZNF576Q9H609 170 aa8.11□□□□□ -1.11
ITGB1-208ENST00000464001 IGHA2P01877 340 aa8.1□□□□□ -1.11
ITGB1-208ENST00000464001 NFKBIBQ15653 356 aa8.1□□□□□ -1.11
ITGB1-208ENST00000464001 ALKBH8Q96BT7 664 aaKnown RBP8.1□□□□□ -1.11
ITGB1-208ENST00000464001 MFSD14AQ96MC6 490 aa8.1□□□□□ -1.11
ITGB1-208ENST00000464001 RAD18Q9NS91 495 aa8.1□□□□□ -1.11
ITGB1-208ENST00000464001 ATG3Q9NT62 314 aa8.1□□□□□ -1.11
ITGB1-208ENST00000464001 TRAK1Q9UPV9 953 aa8.1□□□□□ -1.11
ITGB1-208ENST00000464001 CDPF1Q6NVV7 123 aa8.09□□□□□ -1.11
ITGB1-208ENST00000464001 PRPF40BQ6NWY9 871 aaKnown RBP8.09□□□□□ -1.11
ITGB1-208ENST00000464001 C2CD4AQ8NCU7 369 aaPredicted RBP8.09□□□□□ -1.11
ITGB1-208ENST00000464001 FBLIM1Q8WUP2 373 aa8.09□□□□□ -1.11
ITGB1-208ENST00000464001 KRTAP4-8Q9BYQ9 185 aa8.09□□□□□ -1.11
ITGB1-208ENST00000464001 BIN2Q9UBW5 565 aaPredicted RBP8.09□□□□□ -1.11
ITGB1-208ENST00000464001 GNEQ9Y223 722 aaKnown RBP8.09□□□□□ -1.11
ITGB1-208ENST00000464001 TMEM238LA0A1B0GVL6 79 aa8.08□□□□□ -1.12
ITGB1-208ENST00000464001 BRD1O95696 1058 aa8.08□□□□□ -1.12
ITGB1-208ENST00000464001 ADH5P11766 374 aa8.08□□□□□ -1.12
ITGB1-208ENST00000464001 RPS26P11Q5JNZ5 115 aaPredicted RBP8.08□□□□□ -1.12
ITGB1-208ENST00000464001 FBXL6Q8N531 539 aa8.08□□□□□ -1.12
ITGB1-208ENST00000464001 ABCB6Q9NP58 842 aa8.08□□□□□ -1.12
ITGB1-208ENST00000464001 PPP4R2Q9NY27 417 aa8.08□□□□□ -1.12
ITGB1-208ENST00000464001 CTSBP07858 339 aa8.07□□□□□ -1.12
ITGB1-208ENST00000464001 AP3B2Q13367 1082 aa8.07□□□□□ -1.12
ITGB1-208ENST00000464001 CPSF6Q16630 551 aaKnown RBP eCLIP8.07□□□□□ -1.12
ITGB1-208ENST00000464001 EZH1Q92800 747 aaPredicted RBP8.07□□□□□ -1.12
ITGB1-208ENST00000464001 TRIM56Q9BRZ2 755 aaKnown RBP8.07□□□□□ -1.12
ITGB1-208ENST00000464001 OSBPL1AQ9BXW6 950 aa8.07□□□□□ -1.12
ITGB1-208ENST00000464001 PIM2Q9P1W9 311 aa8.07□□□□□ -1.12
ITGB1-208ENST00000464001 TIMELESSQ9UNS1 1208 aa8.07□□□□□ -1.12
ITGB1-208ENST00000464001 F13BP05160 661 aa8.06□□□□□ -1.12
ITGB1-208ENST00000464001 SPINK2P20155 84 aa8.06□□□□□ -1.12
ITGB1-208ENST00000464001 MAP7Q14244 749 aa8.06□□□□□ -1.12
ITGB1-208ENST00000464001 AKAP4Q5JQC9 854 aa8.06□□□□□ -1.12
ITGB1-208ENST00000464001 DYMQ7RTS9 669 aa8.06□□□□□ -1.12
ITGB1-208ENST00000464001 DTX1Q86Y01 620 aa8.06□□□□□ -1.12
ITGB1-208ENST00000464001 NLRP2Q9NX02 1062 aa8.06□□□□□ -1.12
ITGB1-208ENST00000464001 DCTN4Q9UJW0 460 aa8.06□□□□□ -1.12
ITGB1-208ENST00000464001 LEMD3Q9Y2U8 911 aa8.06□□□□□ -1.12
ITGB1-208ENST00000464001 GRM2Q14416 872 aa8.05□□□□□ -1.12
ITGB1-208ENST00000464001 PDE3AQ14432 1141 aa8.05□□□□□ -1.12
ITGB1-208ENST00000464001 TMC7Q7Z402 723 aa8.05□□□□□ -1.12
ITGB1-208ENST00000464001 EPS8L3Q8TE67 593 aaKnown RBP8.05□□□□□ -1.12
ITGB1-208ENST00000464001 METTL22Q9BUU2 404 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-208ENST00000464001 ACTL7BQ9Y614 415 aa8.05□□□□□ -1.12
ITGB1-208ENST00000464001 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-208ENST00000464001 GP2P55259 537 aaKnown RBP8.04□□□□□ -1.12
ITGB1-208ENST00000464001 TBC1D32Q96NH3 1257 aa8.04□□□□□ -1.12
ITGB1-208ENST00000464001 AP4E1Q9UPM8 1137 aa8.04□□□□□ -1.12
ITGB1-208ENST00000464001 SYNGAP1Q96PV0 1343 aa8.03□□□□□ -1.12
ITGB1-208ENST00000464001 AOC2O75106 756 aa8.03□□□□□ -1.12
ITGB1-208ENST00000464001 ECEL1O95672 775 aa8.03□□□□□ -1.12
ITGB1-208ENST00000464001 WNT11O96014 354 aa8.03□□□□□ -1.12
ITGB1-208ENST00000464001 RAB6AP20340 208 aa8.03□□□□□ -1.12
ITGB1-208ENST00000464001 ASPAP45381 313 aa8.03□□□□□ -1.12
ITGB1-208ENST00000464001 HNRNPUQ00839 825 aaKnown RBP eCLIP8.03□□□□□ -1.12
ITGB1-208ENST00000464001 PLCB3Q01970 1234 aa8.03□□□□□ -1.12
ITGB1-208ENST00000464001 DTHD1Q6ZMT9 781 aa8.03□□□□□ -1.12
ITGB1-208ENST00000464001 ZAR1Q86SH2 424 aa8.03□□□□□ -1.12
ITGB1-208ENST00000464001 GLIS3Q8NEA6 775 aa8.03□□□□□ -1.12
ITGB1-208ENST00000464001 PRKAG2Q9UGJ0 569 aa8.03□□□□□ -1.12
ITGB1-208ENST00000464001 NFICP08651 508 aa8.02□□□□□ -1.13
ITGB1-208ENST00000464001 XRCC5P13010 732 aaKnown RBP8.02□□□□□ -1.13
ITGB1-208ENST00000464001 FOSL1P15407 271 aa8.02□□□□□ -1.13
ITGB1-208ENST00000464001 MAPK1P28482 360 aa8.02□□□□□ -1.13
ITGB1-208ENST00000464001 IRAK1P51617 712 aa8.02□□□□□ -1.13
ITGB1-208ENST00000464001 HOXA10P31260 410 aaPredicted RBP8.01□□□□□ -1.13
ITGB1-208ENST00000464001 ZNF157P51786 506 aaPredicted RBP8.01□□□□□ -1.13
ITGB1-208ENST00000464001 FCGRTP55899 365 aa8.01□□□□□ -1.13
ITGB1-208ENST00000464001 PPP2R3AQ06190 1150 aa8.01□□□□□ -1.13
ITGB1-208ENST00000464001 MCTP1Q6DN14 999 aa8.01□□□□□ -1.13
ITGB1-208ENST00000464001 WDR18Q9BV38 432 aa8.01□□□□□ -1.13
ITGB1-208ENST00000464001 GSX1Q9H4S2 264 aaPredicted RBP8.01□□□□□ -1.13
ITGB1-208ENST00000464001 ACSS3Q9H6R3 686 aa8.01□□□□□ -1.13
ITGB1-208ENST00000464001 FAM105AQ9NUU6 356 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms