RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 ZNF202O95125 648 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 POLR3DP05423 398 aaPredicted RBP4.06□□□□□ -1.76
COL8A1-204ENST00000462604 TOP1P11387 765 aaKnown RBP4.06□□□□□ -1.76
COL8A1-204ENST00000462604 SYKP43405 635 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 METAP2P50579 478 aaKnown RBP eCLIP4.06□□□□□ -1.76
COL8A1-204ENST00000462604 CASP7P55210 303 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 EVCP57679 992 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 CABP4P57796 275 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 FOXO4P98177 505 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 KIF23Q02241 960 aaPredicted RBP4.06□□□□□ -1.76
COL8A1-204ENST00000462604 NAA30Q147X3 362 aaPredicted RBP4.06□□□□□ -1.76
COL8A1-204ENST00000462604 TERF2Q15554 542 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 CFAP100Q494V2 611 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 ARHGAP29Q52LW3 1261 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 TAF7LQ5H9L4 462 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 CCDC158Q5M9N0 1113 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 TEX35Q5T0J7 233 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 E4F1Q66K89 784 aaPredicted RBP4.06□□□□□ -1.76
COL8A1-204ENST00000462604 ARMCX5Q6P1M9 558 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 ATG9AQ7Z3C6 839 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 KRT28Q7Z3Y7 464 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 LRP10Q7Z4F1 713 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 NBPF11Q86T75 865 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 MB21D2Q8IYB1 491 aaPredicted RBP4.06□□□□□ -1.76
COL8A1-204ENST00000462604 NFATC2IPQ8NCF5 419 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 CCDC191Q8NCU4 936 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 FBXO18Q8NFZ0 1043 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 NCOA7Q8NI08 942 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 WASF1Q92558 559 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 UBXN4Q92575 508 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 APPBP2Q92624 585 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 NOL10Q9BSC4 688 aaKnown RBP4.06□□□□□ -1.76
COL8A1-204ENST00000462604 ALG1Q9BT22 464 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.06□□□□□ -1.76
COL8A1-204ENST00000462604 ATG3Q9NT62 314 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 CALCOCO1Q9P1Z2 691 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.06□□□□□ -1.76
COL8A1-204ENST00000462604 DACH1Q9UI36 760 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 DNAI1Q9UI46 699 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 CLIC4Q9Y696 253 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 V9GYY5 206 aaPredicted RBP4.06□□□□□ -1.76
COL8A1-204ENST00000462604 PHRF1Q9P1Y6 1649 aaKnown RBP4.06□□□□□ -1.76
COL8A1-204ENST00000462604 MST1RQ04912 1400 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 TMEM94Q12767 1356 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 MROH7-TTC4A0A0A0MT08 1334 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 MAP3K15Q6ZN16 1313 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 FAM237AA0A1B0GTK4 181 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 A0A1B0GUL7 405 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 GOLGA8AA7E2F4 631 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 ZNF213O14771 459 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 ARHGAP6O43182 974 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 ATP8B1O43520 1251 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 CUTAO60888 179 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 PPP6R2O75170 966 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 TADA3O75528 432 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 URI1O94763 535 aaPredicted RBP4.05□□□□□ -1.76
COL8A1-204ENST00000462604 CHGBP05060 677 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 SLFN14P0C7P3 912 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 FDPSP14324 419 aaKnown RBP4.05□□□□□ -1.76
COL8A1-204ENST00000462604 H2AFXP16104 143 aaPredicted RBP4.05□□□□□ -1.76
COL8A1-204ENST00000462604 LMOD1P29536 600 aaPredicted RBP4.05□□□□□ -1.76
COL8A1-204ENST00000462604 CASQ1P31415 396 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 UBASH3AP57075 661 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 ZC3H6P61129 1189 aaKnown RBP4.05□□□□□ -1.76
COL8A1-204ENST00000462604 HAND2P61296 217 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 ETF1P62495 437 aaKnown RBP4.05□□□□□ -1.76
COL8A1-204ENST00000462604 FKBP4Q02790 459 aaKnown RBP eCLIP4.05□□□□□ -1.76
COL8A1-204ENST00000462604 SLC39A14Q15043 492 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 SAFBQ15424 915 aaKnown RBP eCLIP4.05□□□□□ -1.76
COL8A1-204ENST00000462604 CCDC57Q2TAC2 916 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 CCDC93Q567U6 631 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 OTUD7BQ6GQQ9 843 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 NFXL1Q6ZNB6 911 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 CHST3Q7LGC8 479 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 VSTM4Q8IW00 320 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 CNNM3Q8NE01 707 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 ERCC4Q92889 916 aaPredicted RBP4.05□□□□□ -1.76
COL8A1-204ENST00000462604 OSBP2Q969R2 916 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 CCDC34Q96HJ3 373 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 ORAI2Q96SN7 254 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 MPHOSPH8Q99549 860 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 FAM53CQ9NYF3 392 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 TUBE1Q9UJT0 475 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 HPS5Q9UPZ3 1129 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 AXIN2Q9Y2T1 843 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 CAMTA1Q9Y6Y1 1673 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 TSPOAP1O95153 1857 aa4.05□□□□□ -1.76
COL8A1-204ENST00000462604 CHD2O14647 1828 aaKnown RBP4.05□□□□□ -1.76
COL8A1-204ENST00000462604 MARF1Q9Y4F3 1742 aaKnown RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 STK36Q9NRP7 1315 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 EFCAB8A8MWE9 144 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 KIF28PB7ZC32 967 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 POTEB2H3BUK9 544 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 SH2B2O14492 632 aaPredicted RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 NPHP1O15259 732 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 ZBTB43O43298 467 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 PPFIA3O75145 1194 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 PNMA6AP0CW24 399 aaPredicted RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 CDK11BP21127 795 aaKnown RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 MARCKSP29966 332 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms