RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 ADARB2-AS1A8MUL3 147 aa7.57□□□□□ -1.2
COPS3-204ENST00000462236 PHF20L1A8MW92 1017 aa7.57□□□□□ -1.2
COPS3-204ENST00000462236 LDHBP07195 334 aaKnown RBP7.57□□□□□ -1.2
COPS3-204ENST00000462236 CES1P23141 567 aa7.57□□□□□ -1.2
COPS3-204ENST00000462236 ORC1Q13415 861 aa7.57□□□□□ -1.2
COPS3-204ENST00000462236 GRIN2CQ14957 1233 aa7.57□□□□□ -1.2
COPS3-204ENST00000462236 KRT25Q7Z3Z0 450 aa7.57□□□□□ -1.2
COPS3-204ENST00000462236 GALNT12Q8IXK2 581 aa7.57□□□□□ -1.2
COPS3-204ENST00000462236 CHRDQ9H2X0 955 aa7.57□□□□□ -1.2
COPS3-204ENST00000462236 LRRC4BQ9NT99 713 aa7.57□□□□□ -1.2
COPS3-204ENST00000462236 FOXD3Q9UJU5 478 aaPredicted RBP7.57□□□□□ -1.2
COPS3-204ENST00000462236 EFCAB6Q5THR3 1501 aa7.57□□□□□ -1.2
COPS3-204ENST00000462236 DUOX2Q9NRD8 1548 aa7.57□□□□□ -1.2
COPS3-204ENST00000462236 GIPC1O14908 333 aa7.56□□□□□ -1.2
COPS3-204ENST00000462236 KIF4AO95239 1232 aa7.56□□□□□ -1.2
COPS3-204ENST00000462236 EDN3P14138 238 aa7.56□□□□□ -1.2
COPS3-204ENST00000462236 ZNF16P17020 682 aaPredicted RBP7.56□□□□□ -1.2
COPS3-204ENST00000462236 GPLD1P80108 840 aa7.56□□□□□ -1.2
COPS3-204ENST00000462236 HYAL2Q12891 473 aa7.56□□□□□ -1.2
COPS3-204ENST00000462236 GOLGA6L1Q8N7Z2 621 aa7.56□□□□□ -1.2
COPS3-204ENST00000462236 C1orf127Q8N9H9 656 aa7.56□□□□□ -1.2
COPS3-204ENST00000462236 GIPC2Q8TF65 315 aa7.56□□□□□ -1.2
COPS3-204ENST00000462236 FOXD4L4Q8WXT5 416 aaPredicted RBP7.56□□□□□ -1.2
COPS3-204ENST00000462236 CNTN3Q9P232 1028 aa7.56□□□□□ -1.2
COPS3-204ENST00000462236 LMTK2Q8IWU2 1503 aa7.56□□□□□ -1.2
COPS3-204ENST00000462236 NHSL1Q5SYE7 1610 aa7.56□□□□□ -1.2
COPS3-204ENST00000462236 ERBB4Q15303 1308 aa7.55□□□□□ -1.2
COPS3-204ENST00000462236 MDFIQ99750 246 aa7.55□□□□□ -1.2
COPS3-204ENST00000462236 SALL4Q9UJQ4 1053 aa7.55□□□□□ -1.2
COPS3-204ENST00000462236 SPATA31A6Q5VVP1 1343 aa7.54□□□□□ -1.2
COPS3-204ENST00000462236 GCC2Q8IWJ2 1684 aa7.54□□□□□ -1.2
COPS3-204ENST00000462236 NCOA3Q9Y6Q9 1424 aa7.54□□□□□ -1.2
COPS3-204ENST00000462236 ADGRB3O60242 1522 aa7.54□□□□□ -1.2
COPS3-204ENST00000462236 RNFT1Q5M7Z0 435 aa7.54□□□□□ -1.2
COPS3-204ENST00000462236 SLCO4C1Q6ZQN7 724 aa7.54□□□□□ -1.2
COPS3-204ENST00000462236 CCDC74AQ96AQ1 378 aa7.54□□□□□ -1.2
COPS3-204ENST00000462236 ZFYVE9O95405 1425 aa7.53□□□□□ -1.2
COPS3-204ENST00000462236 NOS1P29475 1434 aa7.53□□□□□ -1.2
COPS3-204ENST00000462236 EREGO14944 169 aa7.53□□□□□ -1.2
COPS3-204ENST00000462236 WFS1O76024 890 aa7.53□□□□□ -1.2
COPS3-204ENST00000462236 SLURP2P0DP57 97 aa7.53□□□□□ -1.2
COPS3-204ENST00000462236 VAMP1P23763 118 aa7.53□□□□□ -1.2
COPS3-204ENST00000462236 ZNF772Q68DY9 489 aaPredicted RBP7.53□□□□□ -1.2
COPS3-204ENST00000462236 RAB44Q7Z6P3 723 aaPredicted RBP7.53□□□□□ -1.2
COPS3-204ENST00000462236 OXCT2Q9BYC2 517 aaPredicted RBP7.53□□□□□ -1.2
COPS3-204ENST00000462236 SRCIN1Q9C0H9 1055 aa7.53□□□□□ -1.2
COPS3-204ENST00000462236 RBSNQ9H1K0 784 aa7.53□□□□□ -1.2
COPS3-204ENST00000462236 NLRP2Q9NX02 1062 aa7.53□□□□□ -1.2
COPS3-204ENST00000462236 EID1Q9Y6B2 187 aa7.53□□□□□ -1.2
COPS3-204ENST00000462236 ERBINQ96RT1 1412 aa7.52□□□□□ -1.2
COPS3-204ENST00000462236 MSH6P52701 1360 aa7.52□□□□□ -1.21
COPS3-204ENST00000462236 TSPY4P0CV99 314 aa7.52□□□□□ -1.21
COPS3-204ENST00000462236 TSPY10P0CW01 314 aa7.52□□□□□ -1.21
COPS3-204ENST00000462236 PCBP4P57723 403 aaKnown RBP7.52□□□□□ -1.21
COPS3-204ENST00000462236 KIAA0319Q5VV43 1072 aa7.52□□□□□ -1.21
COPS3-204ENST00000462236 SPACA7Q96KW9 195 aa7.52□□□□□ -1.21
COPS3-204ENST00000462236 UBE2OQ9C0C9 1292 aaKnown RBP7.52□□□□□ -1.21
COPS3-204ENST00000462236 DNAJB12Q9NXW2 375 aaKnown RBP7.52□□□□□ -1.21
COPS3-204ENST00000462236 KLF15Q9UIH9 416 aa7.52□□□□□ -1.21
COPS3-204ENST00000462236 SPG7Q9UQ90 795 aa7.52□□□□□ -1.21
COPS3-204ENST00000462236 TMEM131LA2VDJ0 1609 aa7.52□□□□□ -1.21
COPS3-204ENST00000462236 LAMC1P11047 1609 aa7.52□□□□□ -1.21
COPS3-204ENST00000462236 ELOA3CA0A087WX78 387 aaPredicted RBP7.51□□□□□ -1.21
COPS3-204ENST00000462236 LOC102724428A0A0B4J2F2 783 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 ELOA3DA6NLF2 546 aaPredicted RBP7.51□□□□□ -1.21
COPS3-204ENST00000462236 ALAS2P22557 587 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 GNA15P30679 374 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 SIK1P57059 783 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 DAB2P98082 770 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 KRT76Q01546 638 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 XPCQ01831 940 aaPredicted RBP7.51□□□□□ -1.21
COPS3-204ENST00000462236 IDI1Q13907 227 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 ELOA3BQ3SY89 546 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 TMC4Q7Z404 712 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 NCAPG2Q86XI2 1143 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 CEP120Q8N960 986 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 ELOA3Q8NG57 546 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 FRRS1LQ9P0K9 344 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 GGA1Q9UJY5 639 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 SLC6A14Q9UN76 642 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 RGS12O14924 1447 aa7.51□□□□□ -1.21
COPS3-204ENST00000462236 NEURL1BA8MQ27 555 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 ZBTB42B2RXF5 422 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 ADAMTS2O95450 1211 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 CYP2E1P05181 493 aaPredicted RBP7.5□□□□□ -1.21
COPS3-204ENST00000462236 ADH7P40394 386 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 USPL1Q5W0Q7 1092 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 KANK3Q6NY19 840 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 TREML4Q6UXN2 200 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 CACTIN-AS1Q8N1I8 211 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 TTC9Q92623 222 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 CNTNAP3BQ96NU0 1288 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 SLC26A8Q96RN1 970 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 DUSP9Q99956 384 aaKnown RBP7.5□□□□□ -1.21
COPS3-204ENST00000462236 CNTNAP3Q9BZ76 1288 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 PPP4R2Q9NY27 417 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 PARP2Q9UGN5 583 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 WWC3Q9ULE0 1092 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 TRAK1Q9UPV9 953 aa7.5□□□□□ -1.21
COPS3-204ENST00000462236 XRN1Q8IZH2 1706 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms