RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 PTPN21Q16825 1174 aa21.35■■□□□ 1.01
HPS3-204ENST00000462030 TAF3Q5VWG9 929 aa21.35■■□□□ 1.01
HPS3-204ENST00000462030 SPEF2Q9C093 1822 aa21.35■■□□□ 1.01
HPS3-204ENST00000462030 GLI3P10071 1580 aa21.35■■□□□ 1.01
HPS3-204ENST00000462030 DDX60Q8IY21 1712 aaKnown RBP21.35■■□□□ 1.01
HPS3-204ENST00000462030 CPLX1O14810 134 aa21.35■■□□□ 1.01
HPS3-204ENST00000462030 FANCGO15287 622 aa21.35■■□□□ 1.01
HPS3-204ENST00000462030 ETF1P62495 437 aaKnown RBP21.35■■□□□ 1.01
HPS3-204ENST00000462030 IMMTQ16891 758 aaKnown RBP21.35■■□□□ 1.01
HPS3-204ENST00000462030 WASHC4Q2M389 1173 aa21.35■■□□□ 1.01
HPS3-204ENST00000462030 IKBKBO14920 756 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 CYP27B1O15528 508 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 DHX16O60231 1041 aaKnown RBP21.34■■□□□ 1.01
HPS3-204ENST00000462030 FGAP02671 866 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 GOLGA8FQ08AF8 430 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 GOLGA8DPQ0D2H9 430 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 BMS1Q14692 1282 aaKnown RBP21.34■■□□□ 1.01
HPS3-204ENST00000462030 TTLL7Q6ZT98 887 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 KRT28Q7Z3Y7 464 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 TICAM2Q86XR7 235 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 AIFM3Q96NN9 605 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 TAOK2Q9UL54 1235 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 C4AP0C0L4 1744 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 C4BP0C0L5 1744 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 NBPF26B4DH59 902 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 NBPF14Q5TI25 921 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 NBPF10Q6P3W6 841 aaKnown RBP21.34■■□□□ 1.01
HPS3-204ENST00000462030 NBPF15Q8N660 670 aa21.34■■□□□ 1.01
HPS3-204ENST00000462030 TRIM65Q6PJ69 517 aa21.33■■□□□ 1.01
HPS3-204ENST00000462030 CWC25Q9NXE8 425 aaPredicted RBP21.33■■□□□ 1.01
HPS3-204ENST00000462030 ERICH4A6NGS2 130 aa21.33■■□□□ 1
HPS3-204ENST00000462030 ANKLE2Q86XL3 938 aa21.33■■□□□ 1
HPS3-204ENST00000462030 PHLPP2Q6ZVD8 1323 aa21.33■■□□□ 1
HPS3-204ENST00000462030 LAMB4A4D0S4 1761 aa21.33■■□□□ 1
HPS3-204ENST00000462030 ADORA1P30542 326 aa21.32■■□□□ 1
HPS3-204ENST00000462030 SYKP43405 635 aa21.32■■□□□ 1
HPS3-204ENST00000462030 UBASH3AP57075 661 aa21.32■■□□□ 1
HPS3-204ENST00000462030 SLC39A14Q15043 492 aa21.32■■□□□ 1
HPS3-204ENST00000462030 DCAF5Q96JK2 942 aa21.32■■□□□ 1
HPS3-204ENST00000462030 TUBE1Q9UJT0 475 aa21.32■■□□□ 1
HPS3-204ENST00000462030 PNMA6AP0CW24 399 aaPredicted RBP21.32■■□□□ 1
HPS3-204ENST00000462030 TMEM232C9JQI7 657 aa21.31■■□□□ 1
HPS3-204ENST00000462030 SERPINC1P01008 464 aa21.31■■□□□ 1
HPS3-204ENST00000462030 PNOCQ13519 176 aa21.31■■□□□ 1
HPS3-204ENST00000462030 DHX8Q14562 1220 aaKnown RBP21.31■■□□□ 1
HPS3-204ENST00000462030 DENND2AQ9ULE3 1009 aa21.31■■□□□ 1
HPS3-204ENST00000462030 TUBB4AP04350 444 aa21.31■■□□□ 1
HPS3-204ENST00000462030 SCARF1Q14162 830 aa21.31■■□□□ 1
HPS3-204ENST00000462030 CFAP100Q494V2 611 aa21.31■■□□□ 1
HPS3-204ENST00000462030 SHC4Q6S5L8 630 aa21.31■■□□□ 1
HPS3-204ENST00000462030 NCOA7Q8NI08 942 aa21.31■■□□□ 1
HPS3-204ENST00000462030 UTP14AQ9BVJ6 771 aaKnown RBP21.31■■□□□ 1
HPS3-204ENST00000462030 PUS7LQ9H0K6 701 aaKnown RBP21.31■■□□□ 1
HPS3-204ENST00000462030 NUP188Q5SRE5 1749 aa21.3■■□□□ 1
HPS3-204ENST00000462030 PLA2G4AP47712 749 aa21.3■■□□□ 1
HPS3-204ENST00000462030 MYL5Q02045 173 aa21.3■■□□□ 1
HPS3-204ENST00000462030 RALYLQ86SE5 291 aaKnown RBP21.3■■□□□ 1
HPS3-204ENST00000462030 REXO1L1PQ8IX06 675 aa21.3■■□□□ 1
HPS3-204ENST00000462030 TMX1Q9H3N1 280 aa21.3■■□□□ 1
HPS3-204ENST00000462030 HPSEQ9Y251 543 aa21.3■■□□□ 1
HPS3-204ENST00000462030 TMEM94Q12767 1356 aa21.3■■□□□ 1
HPS3-204ENST00000462030 CABP4P57796 275 aa21.3■■□□□ 1
HPS3-204ENST00000462030 TTC39AQ5SRH9 613 aa21.3■■□□□ 1
HPS3-204ENST00000462030 NKX2-3Q8TAU0 364 aa21.3■■□□□ 1
HPS3-204ENST00000462030 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.3■■□□□ 1
HPS3-204ENST00000462030 TIGD1Q96MW7 591 aa21.3■■□□□ 1
HPS3-204ENST00000462030 NOL10Q9BSC4 688 aaKnown RBP21.3■■□□□ 1
HPS3-204ENST00000462030 A0A0U1RQG5 324 aaPredicted RBP21.29■■□□□ 1
HPS3-204ENST00000462030 UBXN4Q92575 508 aa21.29■■□□□ 1
HPS3-204ENST00000462030 ZBTB3Q9H5J0 574 aa21.29■■□□□ 1
HPS3-204ENST00000462030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.29■■□□□ 1
HPS3-204ENST00000462030 CCP110O43303 1012 aa21.29■■□□□ 1
HPS3-204ENST00000462030 URI1O94763 535 aaPredicted RBP21.29■■□□□ 1
HPS3-204ENST00000462030 RXRAP19793 462 aa21.29■■□□□ 1
HPS3-204ENST00000462030 VPS37DQ86XT2 251 aa21.29■■□□□ 1
HPS3-204ENST00000462030 VSTM4Q8IW00 320 aa21.29■■□□□ 1
HPS3-204ENST00000462030 CLIC6Q96NY7 704 aa21.29■■□□□ 1
HPS3-204ENST00000462030 CCDC66A2RUB6 948 aa21.28■■□□□ 1
HPS3-204ENST00000462030 CIAO1O76071 339 aa21.28■■□□□ 1
HPS3-204ENST00000462030 ZRANB2O95218 330 aaKnown RBP eCLIP21.28■■□□□ 1
HPS3-204ENST00000462030 CSB-PGBD3P0DP91 1061 aa21.28■■□□□ 1
HPS3-204ENST00000462030 PI16Q6UXB8 463 aa21.28■■□□□ 1
HPS3-204ENST00000462030 XAGE2Q96GT9 111 aa21.28■■□□□ 1
HPS3-204ENST00000462030 ALG1Q9BT22 464 aa21.28■■□□□ 1
HPS3-204ENST00000462030 CARD6Q9BX69 1037 aa21.28■■□□□ 1
HPS3-204ENST00000462030 CEP126Q9P2H0 1117 aa21.28■■□□□ 1
HPS3-204ENST00000462030 CBFA2T2O43439 604 aa21.28■■□□□ 1
HPS3-204ENST00000462030 TADA3O75528 432 aa21.28■■□□□ 1
HPS3-204ENST00000462030 PTPAQ15257 358 aa21.28■■□□□ 1
HPS3-204ENST00000462030 MNS1Q8NEH6 495 aa21.28■■□□□ 1
HPS3-204ENST00000462030 PARP3Q9Y6F1 533 aa21.28■■□□□ 1
HPS3-204ENST00000462030 CPDO75976 1380 aa21.27■■□□□ 1
HPS3-204ENST00000462030 ZNF213O14771 459 aa21.27■■□□□ 1
HPS3-204ENST00000462030 ZAP70P43403 619 aa21.27■■□□□ 1
HPS3-204ENST00000462030 CCDC158Q5M9N0 1113 aa21.27■■□□□ 1
HPS3-204ENST00000462030 FANCLQ9NW38 375 aa21.27■■□□□ 1
HPS3-204ENST00000462030 GPAA1O43292 621 aa21.27■□□□□ 0.99
HPS3-204ENST00000462030 TOP1P11387 765 aaKnown RBP21.27■□□□□ 0.99
HPS3-204ENST00000462030 KRT40Q6A162 431 aa21.27■□□□□ 0.99
HPS3-204ENST00000462030 METTL16Q86W50 562 aaKnown RBP21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms