RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 RLBP1P12271 317 aa4.82□□□□□ -1.64
HDAC6-212ENST00000461608 GLB1P16278 677 aa4.82□□□□□ -1.64
HDAC6-212ENST00000461608 PWP1Q13610 501 aa4.82□□□□□ -1.64
HDAC6-212ENST00000461608 GNL2Q13823 731 aaKnown RBP4.82□□□□□ -1.64
HDAC6-212ENST00000461608 GRM2Q14416 872 aa4.82□□□□□ -1.64
HDAC6-212ENST00000461608 TAF1CQ15572 869 aaPredicted RBP4.82□□□□□ -1.64
HDAC6-212ENST00000461608 ASIC4Q96FT7 647 aa4.82□□□□□ -1.64
HDAC6-212ENST00000461608 NSUN5Q96P11 429 aaKnown RBP4.82□□□□□ -1.64
HDAC6-212ENST00000461608 NOC4LQ9BVI4 516 aaKnown RBP4.82□□□□□ -1.64
HDAC6-212ENST00000461608 CCSER2Q9H7U1 834 aa4.82□□□□□ -1.64
HDAC6-212ENST00000461608 KANSL3Q9P2N6 904 aa4.82□□□□□ -1.64
HDAC6-212ENST00000461608 DLL1O00548 723 aa4.81□□□□□ -1.64
HDAC6-212ENST00000461608 DHX15O43143 795 aaKnown RBP4.81□□□□□ -1.64
HDAC6-212ENST00000461608 TGFB1P01137 390 aa4.81□□□□□ -1.64
HDAC6-212ENST00000461608 CTSHP09668 335 aa4.81□□□□□ -1.64
HDAC6-212ENST00000461608 EIF2AK2P19525 551 aaKnown RBP4.81□□□□□ -1.64
HDAC6-212ENST00000461608 JAG1P78504 1218 aa4.81□□□□□ -1.64
HDAC6-212ENST00000461608 LDLRAD1Q5T700 205 aa4.81□□□□□ -1.64
HDAC6-212ENST00000461608 METTL16Q86W50 562 aaKnown RBP4.81□□□□□ -1.64
HDAC6-212ENST00000461608 NT5DC4Q86YG4 428 aa4.81□□□□□ -1.64
HDAC6-212ENST00000461608 SREK1Q8WXA9 508 aaKnown RBP4.81□□□□□ -1.64
HDAC6-212ENST00000461608 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
HDAC6-212ENST00000461608 OSBPL7Q9BZF2 842 aa4.81□□□□□ -1.64
HDAC6-212ENST00000461608 LIN7BQ9HAP6 207 aa4.81□□□□□ -1.64
HDAC6-212ENST00000461608 ANGEL1Q9UNK9 670 aaKnown RBP4.81□□□□□ -1.64
HDAC6-212ENST00000461608 A0A1W2PP55 124 aa4.8□□□□□ -1.64
HDAC6-212ENST00000461608 EIF4EBP3O60516 100 aaPredicted RBP4.8□□□□□ -1.64
HDAC6-212ENST00000461608 GHRHP01286 108 aa4.8□□□□□ -1.64
HDAC6-212ENST00000461608 COL13A1Q5TAT6 717 aaPredicted RBP4.8□□□□□ -1.64
HDAC6-212ENST00000461608 PEAR1Q5VY43 1037 aaPredicted RBP4.8□□□□□ -1.64
HDAC6-212ENST00000461608 NXPE4Q6UWF7 544 aa4.8□□□□□ -1.64
HDAC6-212ENST00000461608 PI16Q6UXB8 463 aa4.8□□□□□ -1.64
HDAC6-212ENST00000461608 CCNJLQ8IV13 435 aa4.8□□□□□ -1.64
HDAC6-212ENST00000461608 DZIP1LQ8IYY4 767 aaKnown RBP4.8□□□□□ -1.64
HDAC6-212ENST00000461608 CACTIN-AS1Q8N1I8 211 aa4.8□□□□□ -1.64
HDAC6-212ENST00000461608 TMEM102Q8N9M5 508 aaPredicted RBP4.8□□□□□ -1.64
HDAC6-212ENST00000461608 GIMAP7Q8NHV1 300 aa4.8□□□□□ -1.64
HDAC6-212ENST00000461608 TTC9Q92623 222 aa4.8□□□□□ -1.64
HDAC6-212ENST00000461608 PLD4Q96BZ4 506 aa4.8□□□□□ -1.64
HDAC6-212ENST00000461608 CEP44Q9C0F1 390 aa4.8□□□□□ -1.64
HDAC6-212ENST00000461608 BHLHE41Q9C0J9 482 aaPredicted RBP4.8□□□□□ -1.64
HDAC6-212ENST00000461608 SRA1Q9HD15 236 aaKnown RBP4.8□□□□□ -1.64
HDAC6-212ENST00000461608 RNF19AQ9NV58 838 aa4.8□□□□□ -1.64
HDAC6-212ENST00000461608 TTF2Q9UNY4 1162 aaKnown RBP4.8□□□□□ -1.64
HDAC6-212ENST00000461608 TRIM33Q9UPN9 1127 aa4.8□□□□□ -1.64
HDAC6-212ENST00000461608 ARID1BQ8NFD5 2236 aaPredicted RBP4.79□□□□□ -1.64
HDAC6-212ENST00000461608 FAM177BA6PVY3 158 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 SMNDC1O75940 238 aaKnown RBP eCLIP4.79□□□□□ -1.64
HDAC6-212ENST00000461608 CYP2E1P05181 493 aaPredicted RBP4.79□□□□□ -1.64
HDAC6-212ENST00000461608 POLR3DP05423 398 aaPredicted RBP4.79□□□□□ -1.64
HDAC6-212ENST00000461608 ITPKAP23677 461 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 RAD51AP2Q09MP3 1159 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 NAALADL2Q58DX5 795 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 RPS26P11Q5JNZ5 115 aaPredicted RBP4.79□□□□□ -1.64
HDAC6-212ENST00000461608 GDF6Q6KF10 455 aaPredicted RBP4.79□□□□□ -1.64
HDAC6-212ENST00000461608 DTHD1Q6ZMT9 781 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 USP48Q86UV5 1035 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 MAP4K3Q8IVH8 894 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 ZNF654Q8IZM8 581 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 AGGF1Q8N302 714 aaeCLIP4.79□□□□□ -1.64
HDAC6-212ENST00000461608 SLC43A3Q8NBI5 491 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 GLIS3Q8NEA6 775 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 SPATA32Q96LK8 384 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 OSMRQ99650 979 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 ZKSCAN3Q9BRR0 538 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 CEP41Q9BYV8 373 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 ABCB6Q9NP58 842 aa4.79□□□□□ -1.64
HDAC6-212ENST00000461608 LOC102724428A0A0B4J2F2 783 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 TMEM238LA0A1B0GVL6 79 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 TM4SF5O14894 197 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 WISP1O95388 367 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 SIK1P57059 783 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 SETDB1Q15047 1291 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 DIEXFQ68CQ4 756 aaKnown RBP4.78□□□□□ -1.64
HDAC6-212ENST00000461608 SV2BQ7L1I2 683 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 ERMP1Q7Z2K6 904 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 TMEM130Q8N3G9 435 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 IL22RA1Q8N6P7 574 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 CEP120Q8N960 986 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 C3orf58Q8NDZ4 430 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 DRC1Q96MC2 740 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 DZANK1Q9NVP4 752 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 GGT7Q9UJ14 662 aa4.78□□□□□ -1.64
HDAC6-212ENST00000461608 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.78□□□□□ -1.64
HDAC6-212ENST00000461608 F8W735 103 aaPredicted RBP4.77□□□□□ -1.65
HDAC6-212ENST00000461608 FCGRTP55899 365 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 ATP11AP98196 1134 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 HNRNPUQ00839 825 aaKnown RBP eCLIP4.77□□□□□ -1.65
HDAC6-212ENST00000461608 NFIAQ12857 509 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 PKN1Q16512 942 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 MEI1Q5TIA1 1274 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 OGFOD2Q6N063 350 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 TXNDC11Q6PKC3 985 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 GALNT11Q8NCW6 608 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 UBXN4Q92575 508 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 ARMC5Q96C12 935 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 TCF12Q99081 682 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 TINF2Q9BSI4 451 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 PBX4Q9BYU1 374 aa4.77□□□□□ -1.65
HDAC6-212ENST00000461608 LATS2Q9NRM7 1088 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms